RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 SPACA4Q8TDM5 124 aa4.97□□□□□ -1.61
CDH1-208ENST00000565810 HIST1H4GQ99525 98 aa4.97□□□□□ -1.61
CDH1-208ENST00000565810 SPANXDQ9BXN6 97 aa4.97□□□□□ -1.61
CDH1-208ENST00000565810 SPANXB1Q9NS25 103 aaPredicted RBP4.97□□□□□ -1.61
CDH1-208ENST00000565810 SPANXCQ9NY87 97 aa4.97□□□□□ -1.61
CDH1-208ENST00000565810 HIGD1BQ9P298 99 aa4.97□□□□□ -1.61
CDH1-208ENST00000565810 APOBP04114 4563 aaKnown RBP4.96□□□□□ -1.61
CDH1-208ENST00000565810 NPC2P61916 151 aa4.96□□□□□ -1.62
CDH1-208ENST00000565810 C9orf129Q5T035 196 aaKnown RBP4.96□□□□□ -1.62
CDH1-208ENST00000565810 LITAFQ99732 161 aa4.96□□□□□ -1.62
CDH1-208ENST00000565810 PRO1933Q9H354 126 aa4.96□□□□□ -1.62
CDH1-208ENST00000565810 PLA2G2DQ9UNK4 145 aa4.96□□□□□ -1.62
CDH1-208ENST00000565810 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.96□□□□□ -1.62
CDH1-208ENST00000565810 A0A087WYN8 130 aa4.95□□□□□ -1.62
CDH1-208ENST00000565810 LOC107984156A0A0G2JMH3 177 aa4.95□□□□□ -1.62
CDH1-208ENST00000565810 HNRNPA3P51991 378 aaKnown RBP4.95□□□□□ -1.62
CDH1-208ENST00000565810 ARL17AQ8IVW1 177 aa4.95□□□□□ -1.62
CDH1-208ENST00000565810 NKAPP1Q8N9T2 125 aa4.95□□□□□ -1.62
CDH1-208ENST00000565810 LINC00308Q8TCZ7 52 aa4.95□□□□□ -1.62
CDH1-208ENST00000565810 FAM30AQ9NZY2 134 aa4.95□□□□□ -1.62
CDH1-208ENST00000565810 A0A1W2PNN7 141 aa4.94□□□□□ -1.62
CDH1-208ENST00000565810 PANO1I0J062 215 aa4.94□□□□□ -1.62
CDH1-208ENST00000565810 TAL2Q16559 108 aa4.94□□□□□ -1.62
CDH1-208ENST00000565810 LBHQ53QV2 105 aaPredicted RBP4.94□□□□□ -1.62
CDH1-208ENST00000565810 Q6ZSA8 131 aa4.94□□□□□ -1.62
CDH1-208ENST00000565810 FAM19A5Q7Z5A7 132 aaPredicted RBP4.94□□□□□ -1.62
CDH1-208ENST00000565810 MUSTN1Q8IVN3 82 aa4.94□□□□□ -1.62
CDH1-208ENST00000565810 PPDPFQ9H3Y8 114 aa4.94□□□□□ -1.62
CDH1-208ENST00000565810 TP73-AS1Q9UF72 201 aa4.94□□□□□ -1.62
CDH1-208ENST00000565810 FAM168BA1KXE4 195 aa4.93□□□□□ -1.62
CDH1-208ENST00000565810 NDUFC2O95298 119 aa4.93□□□□□ -1.62
CDH1-208ENST00000565810 SOSTDC1Q6X4U4 206 aa4.93□□□□□ -1.62
CDH1-208ENST00000565810 C2orf91Q6ZV80 131 aa4.93□□□□□ -1.62
CDH1-208ENST00000565810 SCXQ7RTU7 201 aa4.93□□□□□ -1.62
CDH1-208ENST00000565810 CIRBP-AS1Q8TBR5 109 aa4.93□□□□□ -1.62
CDH1-208ENST00000565810 PLAC8Q9NZF1 115 aa4.93□□□□□ -1.62
CDH1-208ENST00000565810 C22orf24Q9Y442 160 aa4.93□□□□□ -1.62
CDH1-208ENST00000565810 IGLV5-37A0A075B6J1 123 aa4.92□□□□□ -1.62
CDH1-208ENST00000565810 M0QXV9 152 aa4.92□□□□□ -1.62
CDH1-208ENST00000565810 M0R378 163 aa4.92□□□□□ -1.62
CDH1-208ENST00000565810 VPREB1P12018 145 aa4.92□□□□□ -1.62
CDH1-208ENST00000565810 HSD52Q0P140 79 aa4.92□□□□□ -1.62
CDH1-208ENST00000565810 SERTAD4-AS1Q5TG53 156 aa4.92□□□□□ -1.62
CDH1-208ENST00000565810 C7orf33Q8WU49 177 aa4.92□□□□□ -1.62
CDH1-208ENST00000565810 EPPK1P58107 5090 aaKnown RBP4.92□□□□□ -1.62
CDH1-208ENST00000565810 TRBV10-2A0A0K0K1G8 114 aa4.91□□□□□ -1.62
CDH1-208ENST00000565810 TMEM238LA0A1B0GVL6 79 aa4.91□□□□□ -1.62
CDH1-208ENST00000565810 A6NJY4 79 aa4.91□□□□□ -1.62
CDH1-208ENST00000565810 UBE2BP63146 152 aa4.91□□□□□ -1.62
CDH1-208ENST00000565810 S100A7L2Q5SY68 101 aa4.91□□□□□ -1.62
CDH1-208ENST00000565810 PHF5AQ7RTV0 110 aaKnown RBP4.91□□□□□ -1.62
CDH1-208ENST00000565810 MRPL55Q7Z7F7 128 aaKnown RBP4.91□□□□□ -1.62
CDH1-208ENST00000565810 CEND1Q8N111 149 aa4.91□□□□□ -1.62
CDH1-208ENST00000565810 A4D1N5 150 aa4.9□□□□□ -1.63
CDH1-208ENST00000565810 GAGE10A6NGK3 116 aa4.9□□□□□ -1.63
CDH1-208ENST00000565810 EPM2AB3EWF7 344 aa4.9□□□□□ -1.63
CDH1-208ENST00000565810 NCR3O14931 201 aa4.9□□□□□ -1.63
CDH1-208ENST00000565810 EIF4EBP3O60516 100 aaPredicted RBP4.9□□□□□ -1.63
CDH1-208ENST00000565810 CDK2AP2O75956 126 aa4.9□□□□□ -1.63
CDH1-208ENST00000565810 XGP55808 180 aa4.9□□□□□ -1.63
CDH1-208ENST00000565810 CTAG1AP78358 180 aa4.9□□□□□ -1.63
CDH1-208ENST00000565810 PRR3P79522 188 aaKnown RBP4.9□□□□□ -1.63
CDH1-208ENST00000565810 HAMPP81172 84 aa4.9□□□□□ -1.63
CDH1-208ENST00000565810 OR13C6PQ8NH95 151 aa4.9□□□□□ -1.63
CDH1-208ENST00000565810 CBY1Q9Y3M2 126 aa4.9□□□□□ -1.63
CDH1-208ENST00000565810 FAT1Q14517 4588 aa4.9□□□□□ -1.63
CDH1-208ENST00000565810 HSPG2P98160 4391 aa4.89□□□□□ -1.63
CDH1-208ENST00000565810 TRAV13-2A0A0B4J235 113 aa4.89□□□□□ -1.63
CDH1-208ENST00000565810 A6NDN8 102 aa4.89□□□□□ -1.63
CDH1-208ENST00000565810 M0R143 59 aa4.89□□□□□ -1.63
CDH1-208ENST00000565810 KRTAP7-1Q8IUC3 87 aa4.89□□□□□ -1.63
CDH1-208ENST00000565810 Q8NDZ9 215 aa4.89□□□□□ -1.63
CDH1-208ENST00000565810 LINC00167Q96N53 147 aa4.89□□□□□ -1.63
CDH1-208ENST00000565810 DDTP30046 118 aa4.88□□□□□ -1.63
CDH1-208ENST00000565810 LCE2AQ5TA79 106 aaPredicted RBP4.88□□□□□ -1.63
CDH1-208ENST00000565810 RAB37Q96AX2 223 aa4.88□□□□□ -1.63
CDH1-208ENST00000565810 TMEM126AQ9H061 195 aa4.88□□□□□ -1.63
CDH1-208ENST00000565810 IGLV1-50A0A075B6I6 118 aa4.87□□□□□ -1.63
CDH1-208ENST00000565810 IGKV2-28A0A075B6P5 120 aa4.87□□□□□ -1.63
CDH1-208ENST00000565810 RPL37AP8A6NKH3 93 aa4.87□□□□□ -1.63
CDH1-208ENST00000565810 IGKV2D-28P01615 120 aa4.87□□□□□ -1.63
CDH1-208ENST00000565810 FXYD2P54710 66 aa4.87□□□□□ -1.63
CDH1-208ENST00000565810 VPS13BQ7Z7G8 4022 aa4.86□□□□□ -1.63
CDH1-208ENST00000565810 A0A0B4J2C4 111 aa4.86□□□□□ -1.63
CDH1-208ENST00000565810 TRBV10-3A0A0K0K1G6 114 aa4.86□□□□□ -1.63
CDH1-208ENST00000565810 FAM229AH3BQW9 127 aa4.86□□□□□ -1.63
CDH1-208ENST00000565810 SMR3BP02814 79 aaPredicted RBP4.86□□□□□ -1.63
CDH1-208ENST00000565810 HINT1P49773 126 aaPredicted RBP4.86□□□□□ -1.63
CDH1-208ENST00000565810 BVES-AS1Q5T3Y7 98 aa4.86□□□□□ -1.63
CDH1-208ENST00000565810 LINC00337Q8N6G1 96 aa4.86□□□□□ -1.63
CDH1-208ENST00000565810 BIRC6Q9NR09 4857 aa4.86□□□□□ -1.63
CDH1-208ENST00000565810 RYR1P21817 5038 aa4.85□□□□□ -1.63
CDH1-208ENST00000565810 TRAV23DV6A0A075B6W5 121 aa4.85□□□□□ -1.63
CDH1-208ENST00000565810 PRYO14603 147 aa4.85□□□□□ -1.63
CDH1-208ENST00000565810 IGLV6-57P01721 117 aa4.85□□□□□ -1.63
CDH1-208ENST00000565810 CFC1BP0CG36 223 aa4.85□□□□□ -1.63
CDH1-208ENST00000565810 CFC1P0CG37 223 aa4.85□□□□□ -1.63
CDH1-208ENST00000565810 REG3GQ6UW15 175 aa4.85□□□□□ -1.63
CDH1-208ENST00000565810 LINC00528Q8N1L1 170 aa4.85□□□□□ -1.63
CDH1-208ENST00000565810 KCNQ1DNQ9H478 68 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms