RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 LINC01547P58512 204 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-215ENST00000565559 C1orf137Q5JT78 98 aa6.71□□□□□ -1.34
CAPN3-215ENST00000565559 Q8IZM0 81 aa6.71□□□□□ -1.34
CAPN3-215ENST00000565559 PACRGQ96M98 296 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-215ENST00000565559 LOC107984640A0A0U1RRK4 108 aa6.7□□□□□ -1.34
CAPN3-215ENST00000565559 SMIM1B2RUZ4 78 aa6.7□□□□□ -1.34
CAPN3-215ENST00000565559 PRSS2P07478 247 aa6.7□□□□□ -1.34
CAPN3-215ENST00000565559 C6orf226Q5I0X4 101 aa6.7□□□□□ -1.34
CAPN3-215ENST00000565559 COA6Q5JTJ3 125 aaKnown RBP6.7□□□□□ -1.34
CAPN3-215ENST00000565559 CHTOPQ9Y3Y2 248 aaKnown RBP6.7□□□□□ -1.34
CAPN3-215ENST00000565559 TRBV30A0A0K0K1B3 111 aa6.69□□□□□ -1.34
CAPN3-215ENST00000565559 UNQ6190/PRO20217Q6UXQ8 127 aa6.69□□□□□ -1.34
CAPN3-215ENST00000565559 TOMM7Q9P0U1 55 aa6.69□□□□□ -1.34
CAPN3-215ENST00000565559 HSPB8Q9UJY1 196 aa6.69□□□□□ -1.34
CAPN3-215ENST00000565559 C11orf86A6NJI1 115 aa6.68□□□□□ -1.34
CAPN3-215ENST00000565559 F8VRH5 84 aa6.68□□□□□ -1.34
CAPN3-215ENST00000565559 H0Y9J4 135 aa6.68□□□□□ -1.34
CAPN3-215ENST00000565559 TLX1NBP0CAT3 122 aa6.68□□□□□ -1.34
CAPN3-215ENST00000565559 ZNF22P17026 224 aaPredicted RBP6.68□□□□□ -1.34
CAPN3-215ENST00000565559 CXCL5P42830 114 aa6.68□□□□□ -1.34
CAPN3-215ENST00000565559 CKS1BP61024 79 aa6.68□□□□□ -1.34
CAPN3-215ENST00000565559 C10orf25Q5T742 122 aa6.68□□□□□ -1.34
CAPN3-215ENST00000565559 C2orf82Q6UX34 121 aa6.68□□□□□ -1.34
CAPN3-215ENST00000565559 C6orf48Q9UBA6 75 aa6.68□□□□□ -1.34
CAPN3-215ENST00000565559 IGLV5-39A0A0G2JS06 123 aa6.67□□□□□ -1.34
CAPN3-215ENST00000565559 SPINK8P0C7L1 97 aa6.67□□□□□ -1.34
CAPN3-215ENST00000565559 FABP4P15090 132 aa6.67□□□□□ -1.34
CAPN3-215ENST00000565559 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
CAPN3-215ENST00000565559 MUC17Q685J3 4493 aa6.66□□□□□ -1.34
CAPN3-215ENST00000565559 TSPAN13O95857 204 aa6.66□□□□□ -1.34
CAPN3-215ENST00000565559 TMEM170BQ5T4T1 132 aa6.66□□□□□ -1.34
CAPN3-215ENST00000565559 IGLV7-43P04211 117 aa6.65□□□□□ -1.34
CAPN3-215ENST00000565559 MAP1LC3CQ9BXW4 147 aa6.65□□□□□ -1.34
CAPN3-215ENST00000565559 NDUFC2-KCTD14E9PQ53 114 aa6.64□□□□□ -1.35
CAPN3-215ENST00000565559 GAGE2BQ13066 116 aa6.64□□□□□ -1.35
CAPN3-215ENST00000565559 TMEM223A0PJW6 202 aa6.63□□□□□ -1.35
CAPN3-215ENST00000565559 H0Y8G0 127 aa6.63□□□□□ -1.35
CAPN3-215ENST00000565559 PLNP26678 52 aa6.63□□□□□ -1.35
CAPN3-215ENST00000565559 RPL18AQ02543 176 aaKnown RBP6.63□□□□□ -1.35
CAPN3-215ENST00000565559 SFTA2Q6UW10 78 aa6.63□□□□□ -1.35
CAPN3-215ENST00000565559 DPM2O94777 84 aa6.62□□□□□ -1.35
CAPN3-215ENST00000565559 C9orf116Q5BN46 136 aaPredicted RBP6.62□□□□□ -1.35
CAPN3-215ENST00000565559 SYS1-DBNDD2H3BUS1 97 aa6.61□□□□□ -1.35
CAPN3-215ENST00000565559 KRTAP1-4P0C5Y4 121 aa6.61□□□□□ -1.35
CAPN3-215ENST00000565559 PET117Q6UWS5 81 aa6.61□□□□□ -1.35
CAPN3-215ENST00000565559 A0A1W2PNN7 141 aa6.6□□□□□ -1.35
CAPN3-215ENST00000565559 IGKCP01834 107 aa6.6□□□□□ -1.35
CAPN3-215ENST00000565559 GAGE2EQ4V326 116 aa6.6□□□□□ -1.35
CAPN3-215ENST00000565559 GAGE2DQ9UEU5 116 aa6.6□□□□□ -1.35
CAPN3-215ENST00000565559 LINC01545Q5VT33 79 aa6.59□□□□□ -1.35
CAPN3-215ENST00000565559 PHF5AQ7RTV0 110 aaKnown RBP6.59□□□□□ -1.35
CAPN3-215ENST00000565559 ZNF625Q96I27 306 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-215ENST00000565559 PMCHL2Q9BQD1 86 aa6.59□□□□□ -1.35
CAPN3-215ENST00000565559 C3orf79P0CE67 100 aa6.58□□□□□ -1.36
CAPN3-215ENST00000565559 CRYGAP11844 174 aa6.58□□□□□ -1.36
CAPN3-215ENST00000565559 COX17Q14061 63 aa6.58□□□□□ -1.36
CAPN3-215ENST00000565559 LEPROTO15243 131 aa6.57□□□□□ -1.36
CAPN3-215ENST00000565559 S100A6P06703 90 aa6.57□□□□□ -1.36
CAPN3-215ENST00000565559 HERVK_113P61574 105 aa6.57□□□□□ -1.36
CAPN3-215ENST00000565559 TPRXLQ17RH7 258 aa6.57□□□□□ -1.36
CAPN3-215ENST00000565559 C9orf129Q5T035 196 aaKnown RBP6.57□□□□□ -1.36
CAPN3-215ENST00000565559 PLEKHB2Q96CS7 222 aa6.57□□□□□ -1.36
CAPN3-215ENST00000565559 ERG28Q9UKR5 140 aa6.57□□□□□ -1.36
CAPN3-215ENST00000565559 TRIAP1O43715 76 aa6.56□□□□□ -1.36
CAPN3-215ENST00000565559 HERV-K104P63124 156 aa6.56□□□□□ -1.36
CAPN3-215ENST00000565559 HIST3H2BBQ8N257 126 aa6.56□□□□□ -1.36
CAPN3-215ENST00000565559 MYMXA0A1B0GTQ4 84 aa6.55□□□□□ -1.36
CAPN3-215ENST00000565559 FAM168BA1KXE4 195 aa6.55□□□□□ -1.36
CAPN3-215ENST00000565559 S100A2P29034 98 aa6.55□□□□□ -1.36
CAPN3-215ENST00000565559 AKR1D1P51857 326 aa6.55□□□□□ -1.36
CAPN3-215ENST00000565559 KRTDAPP60985 99 aa6.55□□□□□ -1.36
CAPN3-215ENST00000565559 XAGE1AQ9HD64 81 aa6.55□□□□□ -1.36
CAPN3-215ENST00000565559 NDUFA12Q9UI09 145 aa6.55□□□□□ -1.36
CAPN3-215ENST00000565559 C20orf202A1L168 122 aa6.54□□□□□ -1.36
CAPN3-215ENST00000565559 LINC00587B1AMM8 73 aa6.54□□□□□ -1.36
CAPN3-215ENST00000565559 E9PLD3 99 aa6.54□□□□□ -1.36
CAPN3-215ENST00000565559 J3QQQ9 107 aa6.54□□□□□ -1.36
CAPN3-215ENST00000565559 PFN2P35080 140 aa6.54□□□□□ -1.36
CAPN3-215ENST00000565559 NMUP48645 174 aa6.54□□□□□ -1.36
CAPN3-215ENST00000565559 KRTAP7-1Q8IUC3 87 aa6.54□□□□□ -1.36
CAPN3-215ENST00000565559 HIST1H2BLQ99880 126 aa6.54□□□□□ -1.36
CAPN3-215ENST00000565559 FAM19A5Q7Z5A7 132 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-215ENST00000565559 RETNLBQ9BQ08 111 aa6.53□□□□□ -1.36
CAPN3-215ENST00000565559 IGLV7-46A0A075B6I9 117 aa6.52□□□□□ -1.37
CAPN3-215ENST00000565559 C5orf52A6NGY3 159 aa6.52□□□□□ -1.37
CAPN3-215ENST00000565559 M0QXV9 152 aa6.52□□□□□ -1.37
CAPN3-215ENST00000565559 LGALS3P17931 250 aaKnown RBP6.52□□□□□ -1.37
CAPN3-215ENST00000565559 LINC00158P58513 81 aa6.52□□□□□ -1.37
CAPN3-215ENST00000565559 TSPEAR-AS2P59090 65 aa6.52□□□□□ -1.37
CAPN3-215ENST00000565559 SNRPEP62304 92 aaKnown RBP6.52□□□□□ -1.37
CAPN3-215ENST00000565559 SND1-IT1Q9HBX3 110 aa6.52□□□□□ -1.37
CAPN3-215ENST00000565559 TP73-AS1Q9UF72 201 aa6.52□□□□□ -1.37
CAPN3-215ENST00000565559 IGLV5-37A0A075B6J1 123 aa6.51□□□□□ -1.37
CAPN3-215ENST00000565559 LBHQ53QV2 105 aaPredicted RBP6.51□□□□□ -1.37
CAPN3-215ENST00000565559 C22orf24Q9Y442 160 aa6.51□□□□□ -1.37
CAPN3-215ENST00000565559 SMIM13P0DJ93 91 aa6.5□□□□□ -1.37
CAPN3-215ENST00000565559 MEIG1Q5JSS6 88 aa6.5□□□□□ -1.37
CAPN3-215ENST00000565559 TYMSOSQ8TAI1 123 aa6.5□□□□□ -1.37
CAPN3-215ENST00000565559 A0A0U1RRA0 63 aa6.48□□□□□ -1.37
CAPN3-215ENST00000565559 CFC1BP0CG36 223 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms