RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 TMEM126AQ9H061 195 aa9.19□□□□□ -0.94
CDH3-204ENST00000565453 TMEM238C9JI98 176 aa9.18□□□□□ -0.94
CDH3-204ENST00000565453 TSPAN13O95857 204 aa9.18□□□□□ -0.94
CDH3-204ENST00000565453 M0R378 163 aa9.17□□□□□ -0.94
CDH3-204ENST00000565453 PRLHP81277 87 aa9.17□□□□□ -0.94
CDH3-204ENST00000565453 FAM229BQ4G0N7 80 aa9.17□□□□□ -0.94
CDH3-204ENST00000565453 IFI27L1Q96BM0 104 aa9.17□□□□□ -0.94
CDH3-204ENST00000565453 FAM19A1Q7Z5A9 133 aa9.15□□□□□ -0.94
CDH3-204ENST00000565453 LINC00158P58513 81 aa9.13□□□□□ -0.95
CDH3-204ENST00000565453 CBLN2Q8IUK8 224 aa9.13□□□□□ -0.95
CDH3-204ENST00000565453 A0A0U1RRA0 63 aa9.12□□□□□ -0.95
CDH3-204ENST00000565453 FAM19A2Q8N3H0 131 aa9.12□□□□□ -0.95
CDH3-204ENST00000565453 SMIM13P0DJ93 91 aa9.11□□□□□ -0.95
CDH3-204ENST00000565453 PLEKHB2Q96CS7 222 aa9.11□□□□□ -0.95
CDH3-204ENST00000565453 HSBP1O75506 76 aa9.1□□□□□ -0.95
CDH3-204ENST00000565453 LINC00310P59036 64 aa9.1□□□□□ -0.95
CDH3-204ENST00000565453 LINC00304Q8N9R0 145 aa9.1□□□□□ -0.95
CDH3-204ENST00000565453 IGKV2D-26A0A0A0MRZ7 120 aa9.08□□□□□ -0.96
CDH3-204ENST00000565453 HERV-K104P63124 156 aa9.08□□□□□ -0.96
CDH3-204ENST00000565453 MIR7-3HGQ8N6C7 128 aa9.08□□□□□ -0.96
CDH3-204ENST00000565453 TRGC2P03986 189 aa9.07□□□□□ -0.96
CDH3-204ENST00000565453 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
CDH3-204ENST00000565453 C3orf22Q8N5N4 141 aa9.07□□□□□ -0.96
CDH3-204ENST00000565453 NDUFA12Q9UI09 145 aa9.07□□□□□ -0.96
CDH3-204ENST00000565453 PRYO14603 147 aa9.06□□□□□ -0.96
CDH3-204ENST00000565453 BOD1L2Q8IYS8 172 aa9.06□□□□□ -0.96
CDH3-204ENST00000565453 HIGD2AQ9BW72 106 aa9.06□□□□□ -0.96
CDH3-204ENST00000565453 SERF1AO75920 110 aa9.05□□□□□ -0.96
CDH3-204ENST00000565453 SPRR1AP35321 89 aa9.05□□□□□ -0.96
CDH3-204ENST00000565453 TSPEAR-AS2P59090 65 aa9.05□□□□□ -0.96
CDH3-204ENST00000565453 CTAG1AP78358 180 aa9.05□□□□□ -0.96
CDH3-204ENST00000565453 SPRR4Q96PI1 79 aa9.05□□□□□ -0.96
CDH3-204ENST00000565453 RETNLBQ9BQ08 111 aa9.05□□□□□ -0.96
CDH3-204ENST00000565453 MYMXA0A1B0GTQ4 84 aa9.04□□□□□ -0.96
CDH3-204ENST00000565453 H0Y8G0 127 aa9.04□□□□□ -0.96
CDH3-204ENST00000565453 NCR3O14931 201 aa9.04□□□□□ -0.96
CDH3-204ENST00000565453 ATP6V1G1O75348 118 aa9.04□□□□□ -0.96
CDH3-204ENST00000565453 LEPROTL1O95214 131 aa9.04□□□□□ -0.96
CDH3-204ENST00000565453 KCNQ1DNQ9H478 68 aa9.04□□□□□ -0.96
CDH3-204ENST00000565453 LINC00587B1AMM8 73 aa9.03□□□□□ -0.96
CDH3-204ENST00000565453 KRTAP4-16G5E9R7 235 aaPredicted RBP9.03□□□□□ -0.96
CDH3-204ENST00000565453 LINC00337Q8N6G1 96 aa9.03□□□□□ -0.96
CDH3-204ENST00000565453 LOC107984156A0A0G2JMH3 177 aa9.02□□□□□ -0.97
CDH3-204ENST00000565453 LEPROTO15243 131 aa9.02□□□□□ -0.97
CDH3-204ENST00000565453 ARL17AQ8IVW1 177 aa9.02□□□□□ -0.97
CDH3-204ENST00000565453 TRBV10-3A0A0K0K1G6 114 aa9.01□□□□□ -0.97
CDH3-204ENST00000565453 MAP1LC3CQ9BXW4 147 aa9.01□□□□□ -0.97
CDH3-204ENST00000565453 PLNP26678 52 aa9□□□□□ -0.97
CDH3-204ENST00000565453 ZNF706Q9Y5V0 76 aaPredicted RBP9□□□□□ -0.97
CDH3-204ENST00000565453 MUC2Q02817 5179 aa9□□□□□ -0.97
CDH3-204ENST00000565453 COLCA2A8K830 154 aa8.99□□□□□ -0.97
CDH3-204ENST00000565453 DAND5Q8N907 189 aa8.99□□□□□ -0.97
CDH3-204ENST00000565453 SMCR5Q8TEV8 140 aa8.99□□□□□ -0.97
CDH3-204ENST00000565453 J3QQQ9 107 aa8.98□□□□□ -0.97
CDH3-204ENST00000565453 DPM2O94777 84 aa8.98□□□□□ -0.97
CDH3-204ENST00000565453 TPRXLQ17RH7 258 aa8.98□□□□□ -0.97
CDH3-204ENST00000565453 PMCHL2Q9BQD1 86 aa8.98□□□□□ -0.97
CDH3-204ENST00000565453 HSPB8Q9UJY1 196 aa8.98□□□□□ -0.97
CDH3-204ENST00000565453 ETDCA0A1B0GVM5 59 aa8.97□□□□□ -0.97
CDH3-204ENST00000565453 FABP4P15090 132 aa8.97□□□□□ -0.97
CDH3-204ENST00000565453 SLC7A5P1Q8MH63 180 aa8.97□□□□□ -0.97
CDH3-204ENST00000565453 IGLV7-46A0A075B6I9 117 aa8.96□□□□□ -0.98
CDH3-204ENST00000565453 TRBV10-2A0A0K0K1G8 114 aa8.96□□□□□ -0.98
CDH3-204ENST00000565453 IGKCP01834 107 aa8.96□□□□□ -0.98
CDH3-204ENST00000565453 SPAG11AQ6PDA7 123 aa8.96□□□□□ -0.98
CDH3-204ENST00000565453 B5MCH6 92 aa8.95□□□□□ -0.98
CDH3-204ENST00000565453 NMUP48645 174 aa8.95□□□□□ -0.98
CDH3-204ENST00000565453 HERVK_113P61574 105 aa8.95□□□□□ -0.98
CDH3-204ENST00000565453 LINC00483Q53H64 154 aa8.95□□□□□ -0.98
CDH3-204ENST00000565453 PPDPFQ9H3Y8 114 aa8.94□□□□□ -0.98
CDH3-204ENST00000565453 MUC17Q685J3 4493 aa8.94□□□□□ -0.98
CDH3-204ENST00000565453 LGALS3P17931 250 aaKnown RBP8.93□□□□□ -0.98
CDH3-204ENST00000565453 DDTP30046 118 aa8.93□□□□□ -0.98
CDH3-204ENST00000565453 Q8NBF4 154 aa8.93□□□□□ -0.98
CDH3-204ENST00000565453 SPANXB1Q9NS25 103 aaPredicted RBP8.93□□□□□ -0.98
CDH3-204ENST00000565453 ERC2-IT1O76042 136 aa8.92□□□□□ -0.98
CDH3-204ENST00000565453 NDUFC2O95298 119 aa8.92□□□□□ -0.98
CDH3-204ENST00000565453 SOSTDC1Q6X4U4 206 aa8.92□□□□□ -0.98
CDH3-204ENST00000565453 EIF4EBP3O60516 100 aaPredicted RBP8.91□□□□□ -0.98
CDH3-204ENST00000565453 IGLV6-57P01721 117 aa8.91□□□□□ -0.98
CDH3-204ENST00000565453 S100A12P80511 92 aa8.91□□□□□ -0.98
CDH3-204ENST00000565453 Q9BRP9 147 aa8.91□□□□□ -0.98
CDH3-204ENST00000565453 CDIP1Q9H305 208 aa8.91□□□□□ -0.98
CDH3-204ENST00000565453 A0A0J9YXY3 114 aa8.9□□□□□ -0.98
CDH3-204ENST00000565453 E9PLD3 99 aa8.9□□□□□ -0.98
CDH3-204ENST00000565453 ADAMTSL4-AS1Q5T5F5 129 aa8.9□□□□□ -0.98
CDH3-204ENST00000565453 A0A0U1RQV1 116 aa8.89□□□□□ -0.99
CDH3-204ENST00000565453 C4orf48Q5BLP8 95 aa8.89□□□□□ -0.99
CDH3-204ENST00000565453 GAGE2AQ6NT46 116 aa8.89□□□□□ -0.99
CDH3-204ENST00000565453 Q6ZRX8 168 aa8.89□□□□□ -0.99
CDH3-204ENST00000565453 MIEN1Q9BRT3 115 aa8.89□□□□□ -0.99
CDH3-204ENST00000565453 FP248Q71RG6 208 aaPredicted RBP8.88□□□□□ -0.99
CDH3-204ENST00000565453 SYS1-DBNDD2H3BUS1 97 aa8.86□□□□□ -0.99
CDH3-204ENST00000565453 HIST1H2BKO60814 126 aa8.86□□□□□ -0.99
CDH3-204ENST00000565453 SPINK1P00995 79 aa8.86□□□□□ -0.99
CDH3-204ENST00000565453 HIST1H2BJP06899 126 aa8.86□□□□□ -0.99
CDH3-204ENST00000565453 HIST1H2BOP23527 126 aa8.86□□□□□ -0.99
CDH3-204ENST00000565453 HIST1H2BBP33778 126 aa8.86□□□□□ -0.99
CDH3-204ENST00000565453 HIST1H2BDP58876 126 aa8.86□□□□□ -0.99
CDH3-204ENST00000565453 NPC2P61916 151 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms