RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 UBE2DNLQ8IWF7 75 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 OR2T35Q8NGX2 323 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 OR13C6PQ8NH95 151 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 DEFB104AQ8WTQ1 72 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 FAM167A-AS1Q96KT0 104 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 TSC22D3Q99576 134 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 TRGV9Q99603 122 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 MGST2Q99735 147 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 SLC25A21Q9BQT8 299 aaPredicted RBP0.84□□□□□ -2.27
PALB2-203ENST00000565038 GINS3Q9BRX5 216 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 NPVFQ9HCQ7 196 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 U3KQ87 197 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 V9GYH0 126 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 A0A087WTM6 91 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 A0A087WX48 190 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 TRGV1A0A0A0MS02 117 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 TRAV12-1A0A0B4J245 112 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 TMEM256-PLSCR3K7ERE1 68 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 SSSCA1O60232 199 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 SPINK4O60575 86 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 NDUFB6O95139 128 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 DNAL4O96015 105 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 IGHV3-30P01768 117 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 IGHV3-33P01772 117 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 IGLC2P0DOY2 106 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 IGHV3-30-5P0DP03 117 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 CRIP1P50238 77 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 CRYBA4P53673 196 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 SNRPD3P62318 126 aaKnown RBP0.83□□□□□ -2.28
PALB2-203ENST00000565038 AKR1C8PQ5T2L2 129 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 LINC00305Q7Z4B0 112 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 WFDC10BQ8IUB3 73 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 TOMM5Q8N4H5 51 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 TMEM254Q8TBM7 123 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 SMIM4Q8WVI0 70 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 HYLS1Q96M11 299 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 PDCD10Q9BUL8 212 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 SMIM3Q9BZL3 60 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 Q9H521 79 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 C14orf132Q9NPU4 83 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 RPRMQ9NS64 109 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 SCP2D1Q9UJQ7 156 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 HIGD1AQ9Y241 93 aa0.83□□□□□ -2.28
PALB2-203ENST00000565038 TIMM8BQ9Y5J9 83 aaPredicted RBP0.83□□□□□ -2.28
PALB2-203ENST00000565038 FSIP2Q5CZC0 6907 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 F6UZH7 168 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 CORTO00230 105 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 IFNA1P01562 189 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 OR10J4P0C629 311 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 NBEAP1P0C6P0 100 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 IL7P13232 177 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 S100GP29377 79 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 TMBIM6P55061 237 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 CCL18P55774 89 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 TCTAP57738 103 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 PDE6HQ13956 83 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 TMEM128Q5BJH2 165 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 C10orf113Q5VZT2 155 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 EIF5AL1Q6IS14 154 aaKnown RBP0.82□□□□□ -2.28
PALB2-203ENST00000565038 SMIM20Q8N5G0 67 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 Q8TAT8 98 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 ODF3Q96PU9 254 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 PRRT1Q99946 306 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 NPCDR1Q9BY65 106 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 CDC42SE1Q9NRR8 79 aa0.82□□□□□ -2.28
PALB2-203ENST00000565038 DUXBA0A1W2PPF3 345 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 TMEM189A5PLL7 270 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 H7BYZ3 331 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 LYRM1O43325 122 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 SLC25A5P05141 298 aaKnown RBP0.81□□□□□ -2.28
PALB2-203ENST00000565038 MT1HL1P0DM35 61 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 SLC25A6P12236 298 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 RPL7P18124 248 aaKnown RBP0.81□□□□□ -2.28
PALB2-203ENST00000565038 FGF7P21781 194 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 RAB5CP51148 216 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 FOXA3P55318 350 aaPredicted RBP0.81□□□□□ -2.28
PALB2-203ENST00000565038 S100A10P60903 97 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 B2MP61769 119 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 MRPS10P82664 201 aaKnown RBP0.81□□□□□ -2.28
PALB2-203ENST00000565038 SSBP1Q04837 148 aaKnown RBP0.81□□□□□ -2.28
PALB2-203ENST00000565038 C1orf137Q5JT78 98 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 FAM74A1Q5RGS3 127 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 Q5VSD8 79 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 CFAP126Q5VTH2 177 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 KRTAP26-1Q6PEX3 210 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 ENHOQ6UWT2 76 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 BORCS5Q969J3 196 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 OBSCN-AS1Q96MR7 158 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 CIB3Q96Q77 187 aaPredicted RBP0.81□□□□□ -2.28
PALB2-203ENST00000565038 TMEM126AQ9H061 195 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 SH3BGRL3Q9H299 93 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 BATF3Q9NR55 127 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 LYRM2Q9NU23 88 aaPredicted RBP0.81□□□□□ -2.28
PALB2-203ENST00000565038 TMEM14CQ9P0S9 112 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 PRO0255Q9UI72 69 aa0.81□□□□□ -2.28
PALB2-203ENST00000565038 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 UBE2L5PA0A1B0GUS4 154 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 NAP1L6A6NFF2 107 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 A8MWV9 139 aa0.8□□□□□ -2.28
PALB2-203ENST00000565038 TMEM262E9PQX1 116 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms