RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 IGKV2D-26A0A0A0MRZ7 120 aa8.78□□□□□ -1
SPG7-210ENST00000564409 KRTAP13-2Q52LG2 175 aa8.78□□□□□ -1
SPG7-210ENST00000564409 M0R378 163 aa8.77□□□□□ -1.01
SPG7-210ENST00000564409 LINC00158P58513 81 aa8.77□□□□□ -1.01
SPG7-210ENST00000564409 LINC00304Q8N9R0 145 aa8.77□□□□□ -1.01
SPG7-210ENST00000564409 IFI27L1Q96BM0 104 aa8.77□□□□□ -1.01
SPG7-210ENST00000564409 ANAPC11Q9NYG5 84 aa8.77□□□□□ -1.01
SPG7-210ENST00000564409 TMEM223A0PJW6 202 aa8.76□□□□□ -1.01
SPG7-210ENST00000564409 LINC00587B1AMM8 73 aa8.76□□□□□ -1.01
SPG7-210ENST00000564409 TMEM238C9JI98 176 aa8.76□□□□□ -1.01
SPG7-210ENST00000564409 PRLHP81277 87 aa8.76□□□□□ -1.01
SPG7-210ENST00000564409 ATP6V1G1O75348 118 aa8.75□□□□□ -1.01
SPG7-210ENST00000564409 HERV-K104P63124 156 aa8.75□□□□□ -1.01
SPG7-210ENST00000564409 CBLN2Q8IUK8 224 aa8.75□□□□□ -1.01
SPG7-210ENST00000564409 PLEKHB2Q96CS7 222 aa8.75□□□□□ -1.01
SPG7-210ENST00000564409 Q8NDZ9 215 aa8.74□□□□□ -1.01
SPG7-210ENST00000564409 A0A0U1RQV1 116 aa8.73□□□□□ -1.01
SPG7-210ENST00000564409 YPEL4Q96NS1 127 aa8.73□□□□□ -1.01
SPG7-210ENST00000564409 PRYO14603 147 aa8.71□□□□□ -1.02
SPG7-210ENST00000564409 HSBP1O75506 76 aa8.71□□□□□ -1.02
SPG7-210ENST00000564409 HIGD2AQ9BW72 106 aa8.71□□□□□ -1.02
SPG7-210ENST00000564409 MAP1LC3CQ9BXW4 147 aa8.71□□□□□ -1.02
SPG7-210ENST00000564409 ZNF706Q9Y5V0 76 aaPredicted RBP8.71□□□□□ -1.02
SPG7-210ENST00000564409 MEIG1Q5JSS6 88 aa8.7□□□□□ -1.02
SPG7-210ENST00000564409 SPAG11AQ6PDA7 123 aa8.7□□□□□ -1.02
SPG7-210ENST00000564409 BOD1L2Q8IYS8 172 aa8.7□□□□□ -1.02
SPG7-210ENST00000564409 MYMXA0A1B0GTQ4 84 aa8.69□□□□□ -1.02
SPG7-210ENST00000564409 SMIM13P0DJ93 91 aa8.69□□□□□ -1.02
SPG7-210ENST00000564409 LINC00337Q8N6G1 96 aa8.69□□□□□ -1.02
SPG7-210ENST00000564409 KCNQ1DNQ9H478 68 aa8.69□□□□□ -1.02
SPG7-210ENST00000564409 A0A0U1RRA0 63 aa8.68□□□□□ -1.02
SPG7-210ENST00000564409 S100A12P80511 92 aa8.68□□□□□ -1.02
SPG7-210ENST00000564409 TPRXLQ17RH7 258 aa8.68□□□□□ -1.02
SPG7-210ENST00000564409 MIR7-3HGQ8N6C7 128 aa8.68□□□□□ -1.02
SPG7-210ENST00000564409 SPRR4Q96PI1 79 aa8.68□□□□□ -1.02
SPG7-210ENST00000564409 NDUFA12Q9UI09 145 aa8.68□□□□□ -1.02
SPG7-210ENST00000564409 MUC2Q02817 5179 aa8.67□□□□□ -1.02
SPG7-210ENST00000564409 SPRR1AP35321 89 aa8.67□□□□□ -1.02
SPG7-210ENST00000564409 SLC7A5P1Q8MH63 180 aa8.66□□□□□ -1.02
SPG7-210ENST00000564409 FAM19A2Q8N3H0 131 aa8.66□□□□□ -1.02
SPG7-210ENST00000564409 IGLV7-46A0A075B6I9 117 aa8.65□□□□□ -1.02
SPG7-210ENST00000564409 LOC107984156A0A0G2JMH3 177 aa8.65□□□□□ -1.02
SPG7-210ENST00000564409 PLNP26678 52 aa8.65□□□□□ -1.02
SPG7-210ENST00000564409 ARL17AQ8IVW1 177 aa8.65□□□□□ -1.02
SPG7-210ENST00000564409 C3orf22Q8N5N4 141 aa8.65□□□□□ -1.02
SPG7-210ENST00000564409 RETNLBQ9BQ08 111 aa8.65□□□□□ -1.02
SPG7-210ENST00000564409 ETDCA0A1B0GVM5 59 aa8.64□□□□□ -1.03
SPG7-210ENST00000564409 LEPROTL1O95214 131 aa8.64□□□□□ -1.03
SPG7-210ENST00000564409 C4orf48Q5BLP8 95 aa8.64□□□□□ -1.03
SPG7-210ENST00000564409 KRTAP4-16G5E9R7 235 aaPredicted RBP8.63□□□□□ -1.03
SPG7-210ENST00000564409 NCR3O14931 201 aa8.63□□□□□ -1.03
SPG7-210ENST00000564409 LEPROTO15243 131 aa8.63□□□□□ -1.03
SPG7-210ENST00000564409 CDIP1Q9H305 208 aa8.63□□□□□ -1.03
SPG7-210ENST00000564409 HSPB8Q9UJY1 196 aa8.63□□□□□ -1.03
SPG7-210ENST00000564409 TRBV10-2A0A0K0K1G8 114 aa8.62□□□□□ -1.03
SPG7-210ENST00000564409 NMUP48645 174 aa8.62□□□□□ -1.03
SPG7-210ENST00000564409 TRBV10-3A0A0K0K1G6 114 aa8.61□□□□□ -1.03
SPG7-210ENST00000564409 H0Y8G0 127 aa8.61□□□□□ -1.03
SPG7-210ENST00000564409 TRGC2P03986 189 aa8.61□□□□□ -1.03
SPG7-210ENST00000564409 HERVK_113P61574 105 aa8.61□□□□□ -1.03
SPG7-210ENST00000564409 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
SPG7-210ENST00000564409 SMCR5Q8TEV8 140 aa8.61□□□□□ -1.03
SPG7-210ENST00000564409 SERF1AO75920 110 aa8.6□□□□□ -1.03
SPG7-210ENST00000564409 J3QQQ9 107 aa8.59□□□□□ -1.03
SPG7-210ENST00000564409 DPM2O94777 84 aa8.59□□□□□ -1.03
SPG7-210ENST00000564409 SPINK1P00995 79 aa8.59□□□□□ -1.03
SPG7-210ENST00000564409 LINC00483Q53H64 154 aa8.59□□□□□ -1.03
SPG7-210ENST00000564409 TSPEAR-AS2P59090 65 aa8.58□□□□□ -1.04
SPG7-210ENST00000564409 MIEN1Q9BRT3 115 aa8.58□□□□□ -1.04
SPG7-210ENST00000564409 PPDPFQ9H3Y8 114 aa8.58□□□□□ -1.04
SPG7-210ENST00000564409 SPANXB1Q9NS25 103 aaPredicted RBP8.58□□□□□ -1.04
SPG7-210ENST00000564409 B5MCH6 92 aa8.57□□□□□ -1.04
SPG7-210ENST00000564409 NDUFC2O95298 119 aa8.57□□□□□ -1.04
SPG7-210ENST00000564409 LGALS3P17931 250 aaKnown RBP8.57□□□□□ -1.04
SPG7-210ENST00000564409 DDTP30046 118 aa8.57□□□□□ -1.04
SPG7-210ENST00000564409 LINC00310P59036 64 aa8.57□□□□□ -1.04
SPG7-210ENST00000564409 IGKCP01834 107 aa8.56□□□□□ -1.04
SPG7-210ENST00000564409 Q8NBF4 154 aa8.56□□□□□ -1.04
SPG7-210ENST00000564409 DAND5Q8N907 189 aa8.55□□□□□ -1.04
SPG7-210ENST00000564409 CBY1Q9Y3M2 126 aa8.55□□□□□ -1.04
SPG7-210ENST00000564409 IGLV6-57P01721 117 aa8.54□□□□□ -1.04
SPG7-210ENST00000564409 FABP4P15090 132 aa8.54□□□□□ -1.04
SPG7-210ENST00000564409 RPS29P62273 56 aaKnown RBP8.54□□□□□ -1.04
SPG7-210ENST00000564409 JOSD1Q15040 202 aaPredicted RBP8.54□□□□□ -1.04
SPG7-210ENST00000564409 S100A7L2Q5SY68 101 aa8.54□□□□□ -1.04
SPG7-210ENST00000564409 Q6ZRX8 168 aa8.54□□□□□ -1.04
SPG7-210ENST00000564409 SSBP3-AS1Q7Z2R9 100 aa8.54□□□□□ -1.04
SPG7-210ENST00000564409 GAGE2AQ6NT46 116 aa8.53□□□□□ -1.04
SPG7-210ENST00000564409 C5orf52A6NGY3 159 aa8.51□□□□□ -1.05
SPG7-210ENST00000564409 PMCHL2Q9BQD1 86 aa8.51□□□□□ -1.05
SPG7-210ENST00000564409 COLCA2A8K830 154 aa8.5□□□□□ -1.05
SPG7-210ENST00000564409 E9PLD3 99 aa8.5□□□□□ -1.05
SPG7-210ENST00000564409 LCE2AQ5TA79 106 aaPredicted RBP8.5□□□□□ -1.05
SPG7-210ENST00000564409 Q9BRP9 147 aa8.5□□□□□ -1.05
SPG7-210ENST00000564409 TRAV23DV6A0A075B6W5 121 aa8.49□□□□□ -1.05
SPG7-210ENST00000564409 ERC2-IT1O76042 136 aa8.49□□□□□ -1.05
SPG7-210ENST00000564409 A0A0J9YXY3 114 aa8.48□□□□□ -1.05
SPG7-210ENST00000564409 HINT1P49773 126 aaPredicted RBP8.48□□□□□ -1.05
SPG7-210ENST00000564409 MOBPQ13875 183 aa8.48□□□□□ -1.05
SPG7-210ENST00000564409 KRTAP13-3Q3SY46 172 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms