RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 RNASE13Q5GAN3 156 aaKnown RBP12.19□□□□□ -0.46
GDE1-203ENST00000564172 B9D2Q9BPU9 175 aa12.19□□□□□ -0.46
GDE1-203ENST00000564172 IGKV3D-7A0A0C4DH55 119 aa12.19□□□□□ -0.46
GDE1-203ENST00000564172 DNAL4O96015 105 aa12.18□□□□□ -0.46
GDE1-203ENST00000564172 PMAIP1Q13794 54 aa12.18□□□□□ -0.46
GDE1-203ENST00000564172 A0A087WVE0 104 aa12.18□□□□□ -0.46
GDE1-203ENST00000564172 GHRHP01286 108 aa12.18□□□□□ -0.46
GDE1-203ENST00000564172 ADAMTSL4-AS1Q5T5F5 129 aa12.18□□□□□ -0.46
GDE1-203ENST00000564172 H3BNG1 76 aa12.17□□□□□ -0.46
GDE1-203ENST00000564172 ATP5EP56381 51 aaPredicted RBP12.17□□□□□ -0.46
GDE1-203ENST00000564172 ATP5EP2Q5VTU8 51 aa12.17□□□□□ -0.46
GDE1-203ENST00000564172 DEFB131BA0A096LNP1 70 aa12.17□□□□□ -0.46
GDE1-203ENST00000564172 IGHV3-30-3P0DP02 117 aa12.17□□□□□ -0.46
GDE1-203ENST00000564172 C20orf197Q8N268 126 aa12.16□□□□□ -0.46
GDE1-203ENST00000564172 LAMTOR3Q9UHA4 124 aa12.16□□□□□ -0.46
GDE1-203ENST00000564172 KLKP1Q107X0 134 aa12.15□□□□□ -0.46
GDE1-203ENST00000564172 CDC42SE2Q9NRR3 84 aa12.15□□□□□ -0.46
GDE1-203ENST00000564172 DNAH9Q9NYC9 4486 aa12.15□□□□□ -0.46
GDE1-203ENST00000564172 LYPD5Q6UWN5 251 aa12.15□□□□□ -0.46
GDE1-203ENST00000564172 S100A7L2Q5SY68 101 aa12.14□□□□□ -0.47
GDE1-203ENST00000564172 A0A0J9YXV3 536 aa12.14□□□□□ -0.47
GDE1-203ENST00000564172 OBSCN-AS1Q96MR7 158 aa12.14□□□□□ -0.47
GDE1-203ENST00000564172 CD164Q04900 197 aa12.13□□□□□ -0.47
GDE1-203ENST00000564172 LINC00846Q9NV44 126 aa12.13□□□□□ -0.47
GDE1-203ENST00000564172 IGLV4-60A0A075B6I1 120 aa12.12□□□□□ -0.47
GDE1-203ENST00000564172 TRBV10-3A0A0K0K1G6 114 aa12.12□□□□□ -0.47
GDE1-203ENST00000564172 TRAV10A0A0B4J240 114 aa12.11□□□□□ -0.47
GDE1-203ENST00000564172 CCKP06307 115 aa12.11□□□□□ -0.47
GDE1-203ENST00000564172 NDUFA12Q9UI09 145 aa12.11□□□□□ -0.47
GDE1-203ENST00000564172 TRAV7A0A075B6U4 112 aa12.1□□□□□ -0.47
GDE1-203ENST00000564172 IGHV1-58A0A0C4DH39 117 aa12.1□□□□□ -0.47
GDE1-203ENST00000564172 NDUFC1O43677 76 aa12.1□□□□□ -0.47
GDE1-203ENST00000564172 LELP1Q5T871 98 aa12.1□□□□□ -0.47
GDE1-203ENST00000564172 PRR15Q8IV56 129 aa12.1□□□□□ -0.47
GDE1-203ENST00000564172 A0A1B0GUV1 79 aa12.1□□□□□ -0.47
GDE1-203ENST00000564172 Q6ZRU5 148 aa12.1□□□□□ -0.47
GDE1-203ENST00000564172 IGHV3-64A0A075B6Q5 118 aa12.09□□□□□ -0.47
GDE1-203ENST00000564172 TRBV7-6A0A0J9YX20 115 aa12.09□□□□□ -0.47
GDE1-203ENST00000564172 ZNF561-AS1K7EIQ3 104 aa12.07□□□□□ -0.48
GDE1-203ENST00000564172 RPL28P46779 137 aaKnown RBP12.07□□□□□ -0.48
GDE1-203ENST00000564172 COL7A1Q02388 2944 aa12.07□□□□□ -0.48
GDE1-203ENST00000564172 STAB2Q8WWQ8 2551 aa12.07□□□□□ -0.48
GDE1-203ENST00000564172 LINC00242Q5T6M2 205 aa12.06□□□□□ -0.48
GDE1-203ENST00000564172 FAM19A3Q7Z5A8 133 aa12.06□□□□□ -0.48
GDE1-203ENST00000564172 COX6A2Q02221 97 aa12.05□□□□□ -0.48
GDE1-203ENST00000564172 LINC00474Q9P2X8 69 aa12.05□□□□□ -0.48
GDE1-203ENST00000564172 ESRGQ1W209 222 aa12.04□□□□□ -0.48
GDE1-203ENST00000564172 Q8N3U1 123 aa12.04□□□□□ -0.48
GDE1-203ENST00000564172 CIRBPQ14011 172 aaKnown RBP12.03□□□□□ -0.48
GDE1-203ENST00000564172 IGKV3OR2-268A0A0C4DH90 116 aa12.03□□□□□ -0.48
GDE1-203ENST00000564172 RBM3P98179 157 aaKnown RBP12.03□□□□□ -0.48
GDE1-203ENST00000564172 CDKN2A-AS1Q9UH64 79 aa12.03□□□□□ -0.48
GDE1-203ENST00000564172 IGLV5-45A0A087WSX0 123 aa12.02□□□□□ -0.48
GDE1-203ENST00000564172 PRKDCP78527 4128 aaKnown RBP12.02□□□□□ -0.49
GDE1-203ENST00000564172 MEGF8Q7Z7M0 2845 aa12.02□□□□□ -0.49
GDE1-203ENST00000564172 TRAV23DV6A0A075B6W5 121 aa12.01□□□□□ -0.49
GDE1-203ENST00000564172 LINC00308Q8TCZ7 52 aa12.01□□□□□ -0.49
GDE1-203ENST00000564172 FAM218AQ96MZ4 157 aa12.01□□□□□ -0.49
GDE1-203ENST00000564172 C14orf132Q9NPU4 83 aa12.01□□□□□ -0.49
GDE1-203ENST00000564172 TRAV13-2A0A0B4J235 113 aa12□□□□□ -0.49
GDE1-203ENST00000564172 LINC00959A0A1B0GUT2 108 aa11.99□□□□□ -0.49
GDE1-203ENST00000564172 ANGP03950 147 aaKnown RBP11.99□□□□□ -0.49
GDE1-203ENST00000564172 LINC00269Q8N2A0 174 aa11.99□□□□□ -0.49
GDE1-203ENST00000564172 IBA57-AS1B1ANH7 110 aa11.99□□□□□ -0.49
GDE1-203ENST00000564172 WFDC10BQ8IUB3 73 aa11.99□□□□□ -0.49
GDE1-203ENST00000564172 NDUFA1O15239 70 aa11.98□□□□□ -0.49
GDE1-203ENST00000564172 SS18Q15532 418 aa11.98□□□□□ -0.49
GDE1-203ENST00000564172 CLPSL2Q6UWE3 100 aa11.98□□□□□ -0.49
GDE1-203ENST00000564172 F8WEM9 126 aa11.97□□□□□ -0.49
GDE1-203ENST00000564172 REG3AQ06141 175 aa11.96□□□□□ -0.49
GDE1-203ENST00000564172 IGHV3OR16-9A0A0B4J2B5 98 aa11.95□□□□□ -0.5
GDE1-203ENST00000564172 KLK12Q9UKR0 248 aa11.95□□□□□ -0.5
GDE1-203ENST00000564172 Q9HAA7 133 aa11.94□□□□□ -0.5
GDE1-203ENST00000564172 SMIM1B2RUZ4 78 aa11.93□□□□□ -0.5
GDE1-203ENST00000564172 PRR34Q9NV39 138 aa11.93□□□□□ -0.5
GDE1-203ENST00000564172 IGLV5-39A0A0G2JS06 123 aa11.92□□□□□ -0.5
GDE1-203ENST00000564172 LINC00588Q9Y4M8 146 aa11.92□□□□□ -0.5
GDE1-203ENST00000564172 H0YGX0 51 aa11.92□□□□□ -0.5
GDE1-203ENST00000564172 CCL18P55774 89 aa11.91□□□□□ -0.5
GDE1-203ENST00000564172 C9orf129Q5T035 196 aaKnown RBP11.91□□□□□ -0.5
GDE1-203ENST00000564172 ENHOQ6UWT2 76 aa11.91□□□□□ -0.5
GDE1-203ENST00000564172 IGLV10-54A0A075B6I4 117 aa11.9□□□□□ -0.5
GDE1-203ENST00000564172 A0A087WZ39 114 aa11.9□□□□□ -0.5
GDE1-203ENST00000564172 LINC01556Q5JQF7 62 aa11.9□□□□□ -0.5
GDE1-203ENST00000564172 CHCHD10Q8WYQ3 142 aaPredicted RBP11.9□□□□□ -0.5
GDE1-203ENST00000564172 RMI2Q96E14 147 aa11.9□□□□□ -0.51
GDE1-203ENST00000564172 ZNF625Q96I27 306 aaPredicted RBP11.9□□□□□ -0.51
GDE1-203ENST00000564172 CD164L2Q6UWJ8 174 aa11.88□□□□□ -0.51
GDE1-203ENST00000564172 DNAH10OSP0CZ25 163 aa11.87□□□□□ -0.51
GDE1-203ENST00000564172 APLNQ9ULZ1 77 aa11.87□□□□□ -0.51
GDE1-203ENST00000564172 CRPP02741 224 aa11.87□□□□□ -0.51
GDE1-203ENST00000564172 JMJD7-PLA2G4BH0Y9G9 81 aa11.86□□□□□ -0.51
GDE1-203ENST00000564172 UBL5Q9BZL1 73 aa11.86□□□□□ -0.51
GDE1-203ENST00000564172 SNURFQ9Y675 71 aa11.86□□□□□ -0.51
GDE1-203ENST00000564172 NUPR2A6NF83 97 aa11.85□□□□□ -0.51
GDE1-203ENST00000564172 SOSTDC1Q6X4U4 206 aa11.85□□□□□ -0.51
GDE1-203ENST00000564172 FBN3Q75N90 2809 aa11.85□□□□□ -0.51
GDE1-203ENST00000564172 MPLKIPQ8TAP9 179 aa11.84□□□□□ -0.51
GDE1-203ENST00000564172 MRPL55Q7Z7F7 128 aaKnown RBP11.83□□□□□ -0.52
GDE1-203ENST00000564172 ERC2-IT1O76042 136 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms