RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 TIMM17BO60830 172 aa17.13■□□□□ 0.33
SH3GL3-205ENST00000563901 MIEN1Q9BRT3 115 aa17.12■□□□□ 0.33
SH3GL3-205ENST00000563901 A0A1W2PNN7 141 aa17.1■□□□□ 0.33
SH3GL3-205ENST00000563901 SOSTDC1Q6X4U4 206 aa17.1■□□□□ 0.33
SH3GL3-205ENST00000563901 KRTAP7-1Q8IUC3 87 aa17.1■□□□□ 0.33
SH3GL3-205ENST00000563901 Q8NDZ9 215 aa17.1■□□□□ 0.33
SH3GL3-205ENST00000563901 LINC00474Q9P2X8 69 aa17.1■□□□□ 0.33
SH3GL3-205ENST00000563901 A0A087WYN8 130 aa17.09■□□□□ 0.33
SH3GL3-205ENST00000563901 TMEM238C9JI98 176 aa17.09■□□□□ 0.33
SH3GL3-205ENST00000563901 C2orf91Q6ZV80 131 aa17.09■□□□□ 0.33
SH3GL3-205ENST00000563901 SERTAD4-AS1Q5TG53 156 aa17.08■□□□□ 0.32
SH3GL3-205ENST00000563901 FAM19A5Q7Z5A7 132 aaPredicted RBP17.08■□□□□ 0.32
SH3GL3-205ENST00000563901 SCXQ7RTU7 201 aa17.07■□□□□ 0.32
SH3GL3-205ENST00000563901 APOBP04114 4563 aaKnown RBP17.07■□□□□ 0.32
SH3GL3-205ENST00000563901 CIRBP-AS1Q8TBR5 109 aa17.07■□□□□ 0.32
SH3GL3-205ENST00000563901 DDTP30046 118 aa17.06■□□□□ 0.32
SH3GL3-205ENST00000563901 SPANXDQ9BXN6 97 aa17.06■□□□□ 0.32
SH3GL3-205ENST00000563901 SPANXCQ9NY87 97 aa17.06■□□□□ 0.32
SH3GL3-205ENST00000563901 LINC00308Q8TCZ7 52 aa17.04■□□□□ 0.32
SH3GL3-205ENST00000563901 XGP55808 180 aa17.03■□□□□ 0.32
SH3GL3-205ENST00000563901 HNRNPA3P51991 378 aaKnown RBP17.02■□□□□ 0.31
SH3GL3-205ENST00000563901 SPANXB1Q9NS25 103 aaPredicted RBP17.02■□□□□ 0.31
SH3GL3-205ENST00000563901 PLAC8Q9NZF1 115 aa17.02■□□□□ 0.31
SH3GL3-205ENST00000563901 SRSF9Q13242 221 aaKnown RBP eCLIP17.01■□□□□ 0.31
SH3GL3-205ENST00000563901 HIGD1BQ9P298 99 aa17■□□□□ 0.31
SH3GL3-205ENST00000563901 PRR3P79522 188 aaKnown RBP16.99■□□□□ 0.31
SH3GL3-205ENST00000563901 MUSTN1Q8IVN3 82 aa16.99■□□□□ 0.31
SH3GL3-205ENST00000563901 LOC107984156A0A0G2JMH3 177 aa16.99■□□□□ 0.31
SH3GL3-205ENST00000563901 VPREB1P12018 145 aa16.99■□□□□ 0.31
SH3GL3-205ENST00000563901 ARL17AQ8IVW1 177 aa16.99■□□□□ 0.31
SH3GL3-205ENST00000563901 HIST1H4GQ99525 98 aa16.97■□□□□ 0.31
SH3GL3-205ENST00000563901 PLA2G2DQ9UNK4 145 aa16.97■□□□□ 0.31
SH3GL3-205ENST00000563901 PHF5AQ7RTV0 110 aaKnown RBP16.96■□□□□ 0.31
SH3GL3-205ENST00000563901 M0QXV9 152 aa16.96■□□□□ 0.3
SH3GL3-205ENST00000563901 Q6ZVH6 145 aa16.96■□□□□ 0.3
SH3GL3-205ENST00000563901 C22orf24Q9Y442 160 aa16.96■□□□□ 0.3
SH3GL3-205ENST00000563901 EPM2AB3EWF7 344 aa16.95■□□□□ 0.3
SH3GL3-205ENST00000563901 NCR3O14931 201 aa16.95■□□□□ 0.3
SH3GL3-205ENST00000563901 IFITM1P13164 125 aa16.92■□□□□ 0.3
SH3GL3-205ENST00000563901 RPL24P83731 157 aaKnown RBP16.92■□□□□ 0.3
SH3GL3-205ENST00000563901 NKAPP1Q8N9T2 125 aa16.92■□□□□ 0.3
SH3GL3-205ENST00000563901 GAGE10A6NGK3 116 aa16.92■□□□□ 0.3
SH3GL3-205ENST00000563901 IGLV5-37A0A075B6J1 123 aa16.91■□□□□ 0.3
SH3GL3-205ENST00000563901 CTAG1AP78358 180 aa16.9■□□□□ 0.3
SH3GL3-205ENST00000563901 CDK2AP2O75956 126 aa16.89■□□□□ 0.29
SH3GL3-205ENST00000563901 SMR3BP02814 79 aaPredicted RBP16.88■□□□□ 0.29
SH3GL3-205ENST00000563901 MRPL55Q7Z7F7 128 aaKnown RBP16.88■□□□□ 0.29
SH3GL3-205ENST00000563901 C7orf33Q8WU49 177 aa16.88■□□□□ 0.29
SH3GL3-205ENST00000563901 KRTAP11-1Q8IUC1 163 aa16.88■□□□□ 0.29
SH3GL3-205ENST00000563901 NDUFC2O95298 119 aa16.87■□□□□ 0.29
SH3GL3-205ENST00000563901 COPS9Q8WXC6 57 aa16.87■□□□□ 0.29
SH3GL3-205ENST00000563901 LINC00167Q96N53 147 aa16.87■□□□□ 0.29
SH3GL3-205ENST00000563901 HSPG2P98160 4391 aa16.87■□□□□ 0.29
SH3GL3-205ENST00000563901 IGKV2-28A0A075B6P5 120 aa16.86■□□□□ 0.29
SH3GL3-205ENST00000563901 IGKV2D-28P01615 120 aa16.86■□□□□ 0.29
SH3GL3-205ENST00000563901 KIAA1109Q2LD37 5005 aa16.85■□□□□ 0.29
SH3GL3-205ENST00000563901 A4D1N5 150 aa16.85■□□□□ 0.29
SH3GL3-205ENST00000563901 RPL37AP8A6NKH3 93 aa16.85■□□□□ 0.29
SH3GL3-205ENST00000563901 CEND1Q8N111 149 aa16.84■□□□□ 0.29
SH3GL3-205ENST00000563901 PPDPFQ9H3Y8 114 aa16.84■□□□□ 0.29
SH3GL3-205ENST00000563901 BIRC6Q9NR09 4857 aa16.84■□□□□ 0.29
SH3GL3-205ENST00000563901 M0R378 163 aa16.83■□□□□ 0.28
SH3GL3-205ENST00000563901 HSD52Q0P140 79 aa16.83■□□□□ 0.28
SH3GL3-205ENST00000563901 TAL2Q16559 108 aa16.83■□□□□ 0.28
SH3GL3-205ENST00000563901 RYR1P21817 5038 aa16.82■□□□□ 0.28
SH3GL3-205ENST00000563901 UBE2BP63146 152 aa16.81■□□□□ 0.28
SH3GL3-205ENST00000563901 FXYD2P54710 66 aa16.8■□□□□ 0.28
SH3GL3-205ENST00000563901 LBHQ53QV2 105 aaPredicted RBP16.8■□□□□ 0.28
SH3GL3-205ENST00000563901 LINC00337Q8N6G1 96 aa16.8■□□□□ 0.28
SH3GL3-205ENST00000563901 TRBV10-2A0A0K0K1G8 114 aa16.78■□□□□ 0.28
SH3GL3-205ENST00000563901 TRBV10-3A0A0K0K1G6 114 aa16.78■□□□□ 0.28
SH3GL3-205ENST00000563901 LINC00528Q8N1L1 170 aa16.78■□□□□ 0.28
SH3GL3-205ENST00000563901 KRTAP17-1Q9BYP8 105 aa16.78■□□□□ 0.28
SH3GL3-205ENST00000563901 IGLV1-50A0A075B6I6 118 aa16.76■□□□□ 0.27
SH3GL3-205ENST00000563901 HINT1P49773 126 aaPredicted RBP16.76■□□□□ 0.27
SH3GL3-205ENST00000563901 M0R143 59 aa16.75■□□□□ 0.27
SH3GL3-205ENST00000563901 OR13C6PQ8NH95 151 aa16.75■□□□□ 0.27
SH3GL3-205ENST00000563901 S100A7L2Q5SY68 101 aa16.74■□□□□ 0.27
SH3GL3-205ENST00000563901 FAT1Q14517 4588 aa16.73■□□□□ 0.27
SH3GL3-205ENST00000563901 PSORS1C2Q9UIG4 136 aa16.73■□□□□ 0.27
SH3GL3-205ENST00000563901 IGLV6-57P01721 117 aa16.72■□□□□ 0.27
SH3GL3-205ENST00000563901 BATFQ16520 125 aa16.72■□□□□ 0.27
SH3GL3-205ENST00000563901 BVES-AS1Q5T3Y7 98 aa16.72■□□□□ 0.27
SH3GL3-205ENST00000563901 CFC1BP0CG36 223 aa16.71■□□□□ 0.27
SH3GL3-205ENST00000563901 CFC1P0CG37 223 aa16.71■□□□□ 0.27
SH3GL3-205ENST00000563901 SNHG12Q9BXW3 62 aa16.71■□□□□ 0.27
SH3GL3-205ENST00000563901 A6NDN8 102 aa16.7■□□□□ 0.26
SH3GL3-205ENST00000563901 VPS13BQ7Z7G8 4022 aa16.68■□□□□ 0.26
SH3GL3-205ENST00000563901 TMEM238LA0A1B0GVL6 79 aa16.67■□□□□ 0.26
SH3GL3-205ENST00000563901 A6NJY4 79 aa16.67■□□□□ 0.26
SH3GL3-205ENST00000563901 NHP2Q9NX24 153 aaKnown RBP16.67■□□□□ 0.26
SH3GL3-205ENST00000563901 TMEM126AQ9H061 195 aa16.66■□□□□ 0.26
SH3GL3-205ENST00000563901 TRAV13-2A0A0B4J235 113 aa16.65■□□□□ 0.26
SH3GL3-205ENST00000563901 K7ERJ3 54 aa16.65■□□□□ 0.26
SH3GL3-205ENST00000563901 RPL37AP61513 92 aaKnown RBP16.65■□□□□ 0.26
SH3GL3-205ENST00000563901 KCNQ1DNQ9H478 68 aa16.65■□□□□ 0.26
SH3GL3-205ENST00000563901 RPL13AP40429 203 aaKnown RBP16.64■□□□□ 0.25
SH3GL3-205ENST00000563901 C1orf137Q5JT78 98 aa16.64■□□□□ 0.25
SH3GL3-205ENST00000563901 TRAV23DV6A0A075B6W5 121 aa16.63■□□□□ 0.25
SH3GL3-205ENST00000563901 REG3GQ6UW15 175 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 458.3 ms