RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 SERTAD4-AS1Q5TG53 156 aa11.96□□□□□ -0.49
SYNGR3-203ENST00000563869 MIEN1Q9BRT3 115 aa11.96□□□□□ -0.49
SYNGR3-203ENST00000563869 HMCN2Q8NDA2 5059 aa11.96□□□□□ -0.5
SYNGR3-203ENST00000563869 SCGB1D4Q6XE38 83 aa11.95□□□□□ -0.5
SYNGR3-203ENST00000563869 TP73-AS1Q9UF72 201 aa11.95□□□□□ -0.5
SYNGR3-203ENST00000563869 A0A0J9YXY3 114 aa11.94□□□□□ -0.5
SYNGR3-203ENST00000563869 TMEM238C9JI98 176 aa11.94□□□□□ -0.5
SYNGR3-203ENST00000563869 LBHQ53QV2 105 aaPredicted RBP11.94□□□□□ -0.5
SYNGR3-203ENST00000563869 ANKRD39Q53RE8 183 aa11.94□□□□□ -0.5
SYNGR3-203ENST00000563869 Q6ZVH6 145 aa11.94□□□□□ -0.5
SYNGR3-203ENST00000563869 VAMP8Q9BV40 100 aa11.94□□□□□ -0.5
SYNGR3-203ENST00000563869 SND1-IT1Q9HBX3 110 aa11.94□□□□□ -0.5
SYNGR3-203ENST00000563869 IGKV2D-26A0A0A0MRZ7 120 aa11.93□□□□□ -0.5
SYNGR3-203ENST00000563869 SMIM13P0DJ93 91 aa11.93□□□□□ -0.5
SYNGR3-203ENST00000563869 UBR4Q5T4S7 5183 aa11.93□□□□□ -0.5
SYNGR3-203ENST00000563869 C9orf129Q5T035 196 aaKnown RBP11.92□□□□□ -0.5
SYNGR3-203ENST00000563869 LINC00528Q8N1L1 170 aa11.92□□□□□ -0.5
SYNGR3-203ENST00000563869 XAGE1AQ9HD64 81 aa11.92□□□□□ -0.5
SYNGR3-203ENST00000563869 PANO1I0J062 215 aa11.91□□□□□ -0.5
SYNGR3-203ENST00000563869 MIR7-3HGQ8N6C7 128 aa11.91□□□□□ -0.5
SYNGR3-203ENST00000563869 NKAPP1Q8N9T2 125 aa11.91□□□□□ -0.5
SYNGR3-203ENST00000563869 LOC107984156A0A0G2JMH3 177 aa11.9□□□□□ -0.5
SYNGR3-203ENST00000563869 ARL17AQ8IVW1 177 aa11.9□□□□□ -0.5
SYNGR3-203ENST00000563869 PPDPFQ9H3Y8 114 aa11.9□□□□□ -0.5
SYNGR3-203ENST00000563869 LRP1Q07954 4544 aaKnown RBP11.89□□□□□ -0.51
SYNGR3-203ENST00000563869 IGLV5-37A0A075B6J1 123 aa11.89□□□□□ -0.51
SYNGR3-203ENST00000563869 S100A12P80511 92 aa11.89□□□□□ -0.51
SYNGR3-203ENST00000563869 M0QXV9 152 aa11.88□□□□□ -0.51
SYNGR3-203ENST00000563869 DLEU1O43261 78 aa11.88□□□□□ -0.51
SYNGR3-203ENST00000563869 FAM19A5Q7Z5A7 132 aaPredicted RBP11.88□□□□□ -0.51
SYNGR3-203ENST00000563869 A0A0U1RRA0 63 aa11.87□□□□□ -0.51
SYNGR3-203ENST00000563869 A0A1W2PNN7 141 aa11.86□□□□□ -0.51
SYNGR3-203ENST00000563869 COX8AP10176 69 aa11.86□□□□□ -0.51
SYNGR3-203ENST00000563869 IFITM1P13164 125 aa11.86□□□□□ -0.51
SYNGR3-203ENST00000563869 CBY1Q9Y3M2 126 aa11.86□□□□□ -0.51
SYNGR3-203ENST00000563869 FAT3Q8TDW7 4589 aa11.85□□□□□ -0.51
SYNGR3-203ENST00000563869 NDUFC2O95298 119 aa11.85□□□□□ -0.51
SYNGR3-203ENST00000563869 SPATA45Q537H7 98 aa11.85□□□□□ -0.51
SYNGR3-203ENST00000563869 PYY3Q5JQD4 70 aa11.85□□□□□ -0.51
SYNGR3-203ENST00000563869 MRPL55Q7Z7F7 128 aaKnown RBP11.85□□□□□ -0.51
SYNGR3-203ENST00000563869 PCP2Q8IVA1 136 aa11.85□□□□□ -0.51
SYNGR3-203ENST00000563869 SPANXDQ9BXN6 97 aa11.85□□□□□ -0.51
SYNGR3-203ENST00000563869 SPANXCQ9NY87 97 aa11.85□□□□□ -0.51
SYNGR3-203ENST00000563869 PAM16Q9Y3D7 125 aa11.85□□□□□ -0.51
SYNGR3-203ENST00000563869 BOD1L2Q8IYS8 172 aa11.84□□□□□ -0.51
SYNGR3-203ENST00000563869 C22orf24Q9Y442 160 aa11.84□□□□□ -0.51
SYNGR3-203ENST00000563869 OXTP01178 125 aa11.83□□□□□ -0.52
SYNGR3-203ENST00000563869 UBE2BP63146 152 aa11.83□□□□□ -0.52
SYNGR3-203ENST00000563869 TRBV10-2A0A0K0K1G8 114 aa11.82□□□□□ -0.52
SYNGR3-203ENST00000563869 FAM168BA1KXE4 195 aa11.82□□□□□ -0.52
SYNGR3-203ENST00000563869 SPANXB1Q9NS25 103 aaPredicted RBP11.82□□□□□ -0.52
SYNGR3-203ENST00000563869 M0R378 163 aa11.81□□□□□ -0.52
SYNGR3-203ENST00000563869 SMIM6P0DI80 62 aa11.81□□□□□ -0.52
SYNGR3-203ENST00000563869 VPREB1P12018 145 aa11.81□□□□□ -0.52
SYNGR3-203ENST00000563869 RPL37AP61513 92 aaKnown RBP11.81□□□□□ -0.52
SYNGR3-203ENST00000563869 SLC25A34Q6PIV7 304 aa11.81□□□□□ -0.52
SYNGR3-203ENST00000563869 TTTY13Q9BZ97 58 aa11.81□□□□□ -0.52
SYNGR3-203ENST00000563869 KRTAP10-4P60372 401 aaPredicted RBP11.8□□□□□ -0.52
SYNGR3-203ENST00000563869 SRSF9Q13242 221 aaKnown RBP eCLIP11.8□□□□□ -0.52
SYNGR3-203ENST00000563869 LINC00518Q8N0U6 118 aa11.8□□□□□ -0.52
SYNGR3-203ENST00000563869 LITAFQ99732 161 aa11.8□□□□□ -0.52
SYNGR3-203ENST00000563869 LINC00308Q8TCZ7 52 aa11.79□□□□□ -0.52
SYNGR3-203ENST00000563869 ADAMTSL4-AS1Q5T5F5 129 aa11.78□□□□□ -0.52
SYNGR3-203ENST00000563869 PHF5AQ7RTV0 110 aaKnown RBP11.78□□□□□ -0.52
SYNGR3-203ENST00000563869 DAND5Q8N907 189 aa11.78□□□□□ -0.52
SYNGR3-203ENST00000563869 HIGD1BQ9P298 99 aa11.78□□□□□ -0.52
SYNGR3-203ENST00000563869 KRTAP7-1Q8IUC3 87 aa11.75□□□□□ -0.53
SYNGR3-203ENST00000563869 LINC00167Q96N53 147 aa11.75□□□□□ -0.53
SYNGR3-203ENST00000563869 C14orf144Q96I85 54 aa11.74□□□□□ -0.53
SYNGR3-203ENST00000563869 PRR3P79522 188 aaKnown RBP11.73□□□□□ -0.53
SYNGR3-203ENST00000563869 S100A7L2Q5SY68 101 aa11.73□□□□□ -0.53
SYNGR3-203ENST00000563869 TAL2Q16559 108 aa11.72□□□□□ -0.53
SYNGR3-203ENST00000563869 HIST1H4GQ99525 98 aa11.72□□□□□ -0.53
SYNGR3-203ENST00000563869 PKHD1L1Q86WI1 4243 aa11.71□□□□□ -0.53
SYNGR3-203ENST00000563869 IGLV1-50A0A075B6I6 118 aa11.71□□□□□ -0.53
SYNGR3-203ENST00000563869 UQCR10Q9UDW1 63 aa11.71□□□□□ -0.53
SYNGR3-203ENST00000563869 PSORS1C2Q9UIG4 136 aa11.71□□□□□ -0.53
SYNGR3-203ENST00000563869 PRYO14603 147 aa11.7□□□□□ -0.54
SYNGR3-203ENST00000563869 NPC2P61916 151 aa11.7□□□□□ -0.54
SYNGR3-203ENST00000563869 TMEM126AQ9H061 195 aa11.7□□□□□ -0.54
SYNGR3-203ENST00000563869 C1orf137Q5JT78 98 aa11.69□□□□□ -0.54
SYNGR3-203ENST00000563869 SOSTDC1Q6X4U4 206 aa11.69□□□□□ -0.54
SYNGR3-203ENST00000563869 GAGE10A6NGK3 116 aa11.68□□□□□ -0.54
SYNGR3-203ENST00000563869 NCR3O14931 201 aa11.68□□□□□ -0.54
SYNGR3-203ENST00000563869 DDTP30046 118 aa11.68□□□□□ -0.54
SYNGR3-203ENST00000563869 MUSTN1Q8IVN3 82 aa11.68□□□□□ -0.54
SYNGR3-203ENST00000563869 TRAV13-2A0A0B4J235 113 aa11.67□□□□□ -0.54
SYNGR3-203ENST00000563869 LOC105371267A0A1B0GV96 52 aa11.67□□□□□ -0.54
SYNGR3-203ENST00000563869 TMEM238LA0A1B0GVL6 79 aa11.67□□□□□ -0.54
SYNGR3-203ENST00000563869 A6NJY4 79 aa11.67□□□□□ -0.54
SYNGR3-203ENST00000563869 RPL37AP8A6NKH3 93 aa11.67□□□□□ -0.54
SYNGR3-203ENST00000563869 BCE1O60756 84 aa11.67□□□□□ -0.54
SYNGR3-203ENST00000563869 REG3GQ6UW15 175 aa11.67□□□□□ -0.54
SYNGR3-203ENST00000563869 IGKV2-28A0A075B6P5 120 aa11.66□□□□□ -0.54
SYNGR3-203ENST00000563869 IGKV2D-28P01615 120 aa11.66□□□□□ -0.54
SYNGR3-203ENST00000563869 KCNQ1DNQ9H478 68 aa11.66□□□□□ -0.54
SYNGR3-203ENST00000563869 IGLV6-57P01721 117 aa11.65□□□□□ -0.54
SYNGR3-203ENST00000563869 RPL28P46779 137 aaKnown RBP11.65□□□□□ -0.54
SYNGR3-203ENST00000563869 HINT1P49773 126 aaPredicted RBP11.65□□□□□ -0.54
SYNGR3-203ENST00000563869 SPINK6Q6UWN8 80 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms