RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 LEPROTO15243 131 aa12.34□□□□□ -0.43
CMTM3-206ENST00000563672 LINC00158P58513 81 aa12.34□□□□□ -0.43
CMTM3-206ENST00000563672 HERV-K104P63124 156 aa12.34□□□□□ -0.43
CMTM3-206ENST00000563672 NDUFA12Q9UI09 145 aa12.34□□□□□ -0.43
CMTM3-206ENST00000563672 SYS1-DBNDD2H3BUS1 97 aa12.33□□□□□ -0.44
CMTM3-206ENST00000563672 VPREB1P12018 145 aa12.33□□□□□ -0.44
CMTM3-206ENST00000563672 TSPEAR-AS2P59090 65 aa12.33□□□□□ -0.44
CMTM3-206ENST00000563672 NKAPP1Q8N9T2 125 aa12.33□□□□□ -0.44
CMTM3-206ENST00000563672 DIRC1Q969H9 104 aa12.32□□□□□ -0.44
CMTM3-206ENST00000563672 PLEKHB2Q96CS7 222 aa12.32□□□□□ -0.44
CMTM3-206ENST00000563672 A0A0U1RRA0 63 aa12.31□□□□□ -0.44
CMTM3-206ENST00000563672 MYMXA0A1B0GTQ4 84 aa12.31□□□□□ -0.44
CMTM3-206ENST00000563672 GAGE10A6NGK3 116 aa12.31□□□□□ -0.44
CMTM3-206ENST00000563672 RPL37AP8A6NKH3 93 aa12.3□□□□□ -0.44
CMTM3-206ENST00000563672 H0Y9J4 135 aa12.3□□□□□ -0.44
CMTM3-206ENST00000563672 ATP6V1G1O75348 118 aa12.3□□□□□ -0.44
CMTM3-206ENST00000563672 SMIM13P0DJ93 91 aa12.3□□□□□ -0.44
CMTM3-206ENST00000563672 KRTAP10-8P60410 259 aa12.3□□□□□ -0.44
CMTM3-206ENST00000563672 HERVK_113P61574 105 aa12.3□□□□□ -0.44
CMTM3-206ENST00000563672 RPL24P83731 157 aaKnown RBP12.3□□□□□ -0.44
CMTM3-206ENST00000563672 Q8NDZ9 215 aa12.3□□□□□ -0.44
CMTM3-206ENST00000563672 LINC00587B1AMM8 73 aa12.29□□□□□ -0.44
CMTM3-206ENST00000563672 J3QQQ9 107 aa12.29□□□□□ -0.44
CMTM3-206ENST00000563672 MEIG1Q5JSS6 88 aa12.29□□□□□ -0.44
CMTM3-206ENST00000563672 ZNF861PO60384 105 aa12.28□□□□□ -0.44
CMTM3-206ENST00000563672 LINC01545Q5VT33 79 aa12.28□□□□□ -0.44
CMTM3-206ENST00000563672 PET117Q6UWS5 81 aa12.28□□□□□ -0.44
CMTM3-206ENST00000563672 BCE1O60756 84 aa12.26□□□□□ -0.45
CMTM3-206ENST00000563672 MIR7-3HGQ8N6C7 128 aa12.26□□□□□ -0.45
CMTM3-206ENST00000563672 HMCN2Q8NDA2 5059 aa12.26□□□□□ -0.45
CMTM3-206ENST00000563672 IGLV1-50A0A075B6I6 118 aa12.25□□□□□ -0.45
CMTM3-206ENST00000563672 C3orf79P0CE67 100 aa12.25□□□□□ -0.45
CMTM3-206ENST00000563672 NMUP48645 174 aa12.25□□□□□ -0.45
CMTM3-206ENST00000563672 E9PLD3 99 aa12.24□□□□□ -0.45
CMTM3-206ENST00000563672 LGALS3P17931 250 aaKnown RBP12.24□□□□□ -0.45
CMTM3-206ENST00000563672 IGKV2-28A0A075B6P5 120 aa12.23□□□□□ -0.45
CMTM3-206ENST00000563672 IGKV2D-28P01615 120 aa12.23□□□□□ -0.45
CMTM3-206ENST00000563672 KRTAP1-4P0C5Y4 121 aa12.21□□□□□ -0.45
CMTM3-206ENST00000563672 RPL28P46779 137 aaKnown RBP12.21□□□□□ -0.45
CMTM3-206ENST00000563672 KRTDAPP60985 99 aa12.2□□□□□ -0.46
CMTM3-206ENST00000563672 KRTAP13-1Q8IUC0 172 aa12.2□□□□□ -0.46
CMTM3-206ENST00000563672 BOD1L2Q8IYS8 172 aa12.2□□□□□ -0.46
CMTM3-206ENST00000563672 LOC107984156A0A0G2JMH3 177 aa12.19□□□□□ -0.46
CMTM3-206ENST00000563672 M0R378 163 aa12.19□□□□□ -0.46
CMTM3-206ENST00000563672 ARL17AQ8IVW1 177 aa12.19□□□□□ -0.46
CMTM3-206ENST00000563672 TMEM238C9JI98 176 aa12.17□□□□□ -0.46
CMTM3-206ENST00000563672 DAND5Q8N907 189 aa12.17□□□□□ -0.46
CMTM3-206ENST00000563672 TMEM126AQ9H061 195 aa12.17□□□□□ -0.46
CMTM3-206ENST00000563672 A0A0J9YXY3 114 aa12.16□□□□□ -0.46
CMTM3-206ENST00000563672 PRR26Q8N8Z3 221 aa12.16□□□□□ -0.46
CMTM3-206ENST00000563672 IGKV2D-26A0A0A0MRZ7 120 aa12.15□□□□□ -0.46
CMTM3-206ENST00000563672 UBE2AP49459 152 aa12.15□□□□□ -0.46
CMTM3-206ENST00000563672 ADAMTSL4-AS1Q5T5F5 129 aa12.13□□□□□ -0.47
CMTM3-206ENST00000563672 C20orf202A1L168 122 aa12.12□□□□□ -0.47
CMTM3-206ENST00000563672 NCR3O14931 201 aa12.12□□□□□ -0.47
CMTM3-206ENST00000563672 HIST3H2BBQ8N257 126 aa12.12□□□□□ -0.47
CMTM3-206ENST00000563672 FAM19A1Q7Z5A9 133 aa12.11□□□□□ -0.47
CMTM3-206ENST00000563672 PRLHP81277 87 aa12.1□□□□□ -0.47
CMTM3-206ENST00000563672 LITAFQ99732 161 aa12.09□□□□□ -0.47
CMTM3-206ENST00000563672 HIST1H2BLQ99880 126 aa12.09□□□□□ -0.47
CMTM3-206ENST00000563672 TRBV10-2A0A0K0K1G8 114 aa12.08□□□□□ -0.48
CMTM3-206ENST00000563672 EIF4EBP3O60516 100 aaPredicted RBP12.08□□□□□ -0.48
CMTM3-206ENST00000563672 NDUFC2O95298 119 aa12.08□□□□□ -0.48
CMTM3-206ENST00000563672 SOSTDC1Q6X4U4 206 aa12.08□□□□□ -0.48
CMTM3-206ENST00000563672 MIEN1Q9BRT3 115 aa12.08□□□□□ -0.48
CMTM3-206ENST00000563672 TTTY13Q9BZ97 58 aa12.08□□□□□ -0.48
CMTM3-206ENST00000563672 KCNQ1DNQ9H478 68 aa12.08□□□□□ -0.48
CMTM3-206ENST00000563672 TRBV10-3A0A0K0K1G6 114 aa12.07□□□□□ -0.48
CMTM3-206ENST00000563672 ZNF815PA8K554 130 aa12.07□□□□□ -0.48
CMTM3-206ENST00000563672 PRYO14603 147 aa12.07□□□□□ -0.48
CMTM3-206ENST00000563672 TIMM17BO60830 172 aa12.07□□□□□ -0.48
CMTM3-206ENST00000563672 AKR1D1P51857 326 aa12.07□□□□□ -0.48
CMTM3-206ENST00000563672 S100A2P29034 98 aa12.06□□□□□ -0.48
CMTM3-206ENST00000563672 SPRR1AP35321 89 aa12.06□□□□□ -0.48
CMTM3-206ENST00000563672 RPL13AP40429 203 aaKnown RBP12.06□□□□□ -0.48
CMTM3-206ENST00000563672 ATOH7Q8N100 152 aa12.06□□□□□ -0.48
CMTM3-206ENST00000563672 S100A6P06703 90 aa12.05□□□□□ -0.48
CMTM3-206ENST00000563672 ANKRD39Q53RE8 183 aa12.05□□□□□ -0.48
CMTM3-206ENST00000563672 SPANXB1Q9NS25 103 aaPredicted RBP12.05□□□□□ -0.48
CMTM3-206ENST00000563672 NPC2P61916 151 aa12.04□□□□□ -0.48
CMTM3-206ENST00000563672 LINC00337Q8N6G1 96 aa12.04□□□□□ -0.48
CMTM3-206ENST00000563672 KRTAP4-16G5E9R7 235 aaPredicted RBP12.03□□□□□ -0.48
CMTM3-206ENST00000563672 A0A087X002 238 aa12.02□□□□□ -0.49
CMTM3-206ENST00000563672 DDTP30046 118 aa12.02□□□□□ -0.49
CMTM3-206ENST00000563672 LINC00308Q8TCZ7 52 aa12.02□□□□□ -0.49
CMTM3-206ENST00000563672 IGLV6-57P01721 117 aa12.01□□□□□ -0.49
CMTM3-206ENST00000563672 ANAPC11Q9NYG5 84 aa12.01□□□□□ -0.49
CMTM3-206ENST00000563672 CRYGAP11844 174 aa12□□□□□ -0.49
CMTM3-206ENST00000563672 SNRPEP62304 92 aaKnown RBP12□□□□□ -0.49
CMTM3-206ENST00000563672 S100A12P80511 92 aa11.99□□□□□ -0.49
CMTM3-206ENST00000563672 FAM229BQ4G0N7 80 aa11.99□□□□□ -0.49
CMTM3-206ENST00000563672 HIGD2AQ9BW72 106 aa11.99□□□□□ -0.49
CMTM3-206ENST00000563672 SPANXCQ9NY87 97 aa11.98□□□□□ -0.49
CMTM3-206ENST00000563672 ETDCA0A1B0GVM5 59 aa11.97□□□□□ -0.49
CMTM3-206ENST00000563672 C5orf52A6NGY3 159 aa11.97□□□□□ -0.49
CMTM3-206ENST00000563672 S100A7L2Q5SY68 101 aa11.97□□□□□ -0.49
CMTM3-206ENST00000563672 PCP2Q8IVA1 136 aa11.97□□□□□ -0.49
CMTM3-206ENST00000563672 SCGB1D4Q6XE38 83 aa11.96□□□□□ -0.49
CMTM3-206ENST00000563672 KRTAP13-2Q52LG2 175 aa11.95□□□□□ -0.5
CMTM3-206ENST00000563672 SPANXDQ9BXN6 97 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms