RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 IGHV4-30-4P0DP06 118 aa4.3□□□□□ -1.72
CLK3-212ENST00000563418 SPINT4Q6UDR6 99 aa4.3□□□□□ -1.72
CLK3-212ENST00000563418 A8MWP4 228 aa4.29□□□□□ -1.72
CLK3-212ENST00000563418 FAM229BQ4G0N7 80 aa4.29□□□□□ -1.72
CLK3-212ENST00000563418 Q6ZRX8 168 aa4.29□□□□□ -1.72
CLK3-212ENST00000563418 IGHV6-1A0A0B4J1U7 121 aa4.29□□□□□ -1.72
CLK3-212ENST00000563418 K7EQZ3 153 aa4.29□□□□□ -1.72
CLK3-212ENST00000563418 KCNQ1DNQ9H478 68 aa4.29□□□□□ -1.72
CLK3-212ENST00000563418 RIF1Q5UIP0 2472 aaKnown RBP4.29□□□□□ -1.72
CLK3-212ENST00000563418 Q5VV11 94 aa4.28□□□□□ -1.72
CLK3-212ENST00000563418 OTOGLQ3ZCN5 2332 aa4.28□□□□□ -1.72
CLK3-212ENST00000563418 PLA2G2CQ5R387 149 aa4.28□□□□□ -1.72
CLK3-212ENST00000563418 DEFB135Q30KP9 77 aa4.28□□□□□ -1.72
CLK3-212ENST00000563418 HIVEP2P31629 2446 aa4.28□□□□□ -1.72
CLK3-212ENST00000563418 Q8N9P0 234 aaPredicted RBP4.27□□□□□ -1.73
CLK3-212ENST00000563418 C11orf71Q6IPW1 123 aa4.27□□□□□ -1.73
CLK3-212ENST00000563418 C16orf90A8MZG2 172 aa4.26□□□□□ -1.73
CLK3-212ENST00000563418 DEFB116Q30KQ4 102 aa4.26□□□□□ -1.73
CLK3-212ENST00000563418 Q6YL49 198 aa4.26□□□□□ -1.73
CLK3-212ENST00000563418 ACACBO00763 2458 aa4.26□□□□□ -1.73
CLK3-212ENST00000563418 C9orf129Q5T035 196 aaKnown RBP4.25□□□□□ -1.73
CLK3-212ENST00000563418 ZNF462Q96JM2 2506 aa4.25□□□□□ -1.73
CLK3-212ENST00000563418 LINC00313P59037 77 aa4.25□□□□□ -1.73
CLK3-212ENST00000563418 LINC01558Q9Y6Z2 57 aa4.25□□□□□ -1.73
CLK3-212ENST00000563418 GPR179Q6PRD1 2367 aa4.25□□□□□ -1.73
CLK3-212ENST00000563418 LINC00528Q8N1L1 170 aa4.25□□□□□ -1.73
CLK3-212ENST00000563418 DEFB131BA0A096LNP1 70 aa4.24□□□□□ -1.73
CLK3-212ENST00000563418 LINC00476Q8WZB0 136 aa4.24□□□□□ -1.73
CLK3-212ENST00000563418 ODF3L2Q3SX64 289 aa4.24□□□□□ -1.73
CLK3-212ENST00000563418 IGKV2-24A0A0C4DH68 120 aa4.24□□□□□ -1.73
CLK3-212ENST00000563418 TLN1Q9Y490 2541 aaKnown RBP4.24□□□□□ -1.73
CLK3-212ENST00000563418 A0A096LNI7 61 aa4.24□□□□□ -1.73
CLK3-212ENST00000563418 PIEZO1Q92508 2521 aa4.23□□□□□ -1.73
CLK3-212ENST00000563418 IGLV7-46A0A075B6I9 117 aa4.23□□□□□ -1.73
CLK3-212ENST00000563418 C7orf33Q8WU49 177 aa4.23□□□□□ -1.73
CLK3-212ENST00000563418 A0A087X002 238 aa4.22□□□□□ -1.73
CLK3-212ENST00000563418 C11orf45Q8TAV5 145 aa4.22□□□□□ -1.73
CLK3-212ENST00000563418 SSBP3-AS1Q7Z2R9 100 aa4.21□□□□□ -1.74
CLK3-212ENST00000563418 Q8NA96 180 aa4.21□□□□□ -1.74
CLK3-212ENST00000563418 PTPN13Q12923 2485 aa4.21□□□□□ -1.74
CLK3-212ENST00000563418 IGLV5-48A0A075B6I7 105 aa4.21□□□□□ -1.74
CLK3-212ENST00000563418 DOPEY1Q5JWR5 2465 aa4.21□□□□□ -1.74
CLK3-212ENST00000563418 PLA2G2AP14555 144 aa4.21□□□□□ -1.74
CLK3-212ENST00000563418 IGLV9-49A0A0B4J1Y8 123 aa4.2□□□□□ -1.74
CLK3-212ENST00000563418 SPINK6Q6UWN8 80 aa4.2□□□□□ -1.74
CLK3-212ENST00000563418 ADORA2A-AS1P86434 159 aa4.2□□□□□ -1.74
CLK3-212ENST00000563418 DEFB4AO15263 64 aa4.2□□□□□ -1.74
CLK3-212ENST00000563418 FAM229AH3BQW9 127 aa4.2□□□□□ -1.74
CLK3-212ENST00000563418 DMAC1Q96GE9 116 aa4.19□□□□□ -1.74
CLK3-212ENST00000563418 TLN2Q9Y4G6 2542 aa4.19□□□□□ -1.74
CLK3-212ENST00000563418 A0A1W2PNU3 283 aaPredicted RBP4.19□□□□□ -1.74
CLK3-212ENST00000563418 TTC28Q96AY4 2481 aa4.19□□□□□ -1.74
CLK3-212ENST00000563418 SONP18583 2426 aaKnown RBP4.19□□□□□ -1.74
CLK3-212ENST00000563418 ST20-AS1Q8NBB2 130 aa4.18□□□□□ -1.74
CLK3-212ENST00000563418 A6NN06 94 aa4.18□□□□□ -1.74
CLK3-212ENST00000563418 C1orf134Q5TEV5 83 aa4.18□□□□□ -1.74
CLK3-212ENST00000563418 ZNF575Q86XF7 245 aa4.18□□□□□ -1.74
CLK3-212ENST00000563418 MRPL34Q9BQ48 92 aaKnown RBP4.18□□□□□ -1.74
CLK3-212ENST00000563418 RPL37AP61513 92 aaKnown RBP4.17□□□□□ -1.74
CLK3-212ENST00000563418 SPRR4Q96PI1 79 aa4.17□□□□□ -1.74
CLK3-212ENST00000563418 C22orf24Q9Y442 160 aa4.17□□□□□ -1.74
CLK3-212ENST00000563418 CRIPTQ9P021 101 aa4.17□□□□□ -1.74
CLK3-212ENST00000563418 IGLV1-51P01701 117 aa4.17□□□□□ -1.74
CLK3-212ENST00000563418 C10orf99Q6UWK7 81 aa4.17□□□□□ -1.74
CLK3-212ENST00000563418 SPINK1P00995 79 aa4.16□□□□□ -1.74
CLK3-212ENST00000563418 PRLHP81277 87 aa4.15□□□□□ -1.75
CLK3-212ENST00000563418 Q8N377 158 aa4.15□□□□□ -1.75
CLK3-212ENST00000563418 H3BNG1 76 aa4.15□□□□□ -1.75
CLK3-212ENST00000563418 MAPK1IP1LQ8NDC0 245 aa4.15□□□□□ -1.75
CLK3-212ENST00000563418 PLA2G2DQ9UNK4 145 aa4.14□□□□□ -1.75
CLK3-212ENST00000563418 PLA2G1BP04054 148 aaKnown RBP4.14□□□□□ -1.75
CLK3-212ENST00000563418 DEFB113Q30KQ7 82 aa4.14□□□□□ -1.75
CLK3-212ENST00000563418 IGFL1Q6UW32 110 aa4.14□□□□□ -1.75
CLK3-212ENST00000563418 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
CLK3-212ENST00000563418 FN1P02751 2386 aaKnown RBP4.14□□□□□ -1.75
CLK3-212ENST00000563418 C8orf17Q9NRJ1 99 aa4.13□□□□□ -1.75
CLK3-212ENST00000563418 DSCR10P59022 87 aa4.13□□□□□ -1.75
CLK3-212ENST00000563418 BPTFQ12830 3046 aa4.13□□□□□ -1.75
CLK3-212ENST00000563418 LINC01556Q5JQF7 62 aa4.13□□□□□ -1.75
CLK3-212ENST00000563418 Q8NAQ8 132 aa4.13□□□□□ -1.75
CLK3-212ENST00000563418 A0A1B0GVX0 72 aa4.12□□□□□ -1.75
CLK3-212ENST00000563418 IGKV2D-30A0A075B6S6 120 aa4.12□□□□□ -1.75
CLK3-212ENST00000563418 IGKV2-30P06310 120 aa4.12□□□□□ -1.75
CLK3-212ENST00000563418 CSAG1Q6PB30 78 aa4.12□□□□□ -1.75
CLK3-212ENST00000563418 M0R2N4 97 aa4.12□□□□□ -1.75
CLK3-212ENST00000563418 FAM104AQ969W3 186 aa4.12□□□□□ -1.75
CLK3-212ENST00000563418 IGLV1-50A0A075B6I6 118 aa4.12□□□□□ -1.75
CLK3-212ENST00000563418 A0A1W2PNM2 257 aa4.12□□□□□ -1.75
CLK3-212ENST00000563418 A0A096LNT2 108 aa4.11□□□□□ -1.75
CLK3-212ENST00000563418 IGLV8-61A0A075B6I0 122 aa4.11□□□□□ -1.75
CLK3-212ENST00000563418 C18orf65Q6ZTR6 163 aa4.1□□□□□ -1.75
CLK3-212ENST00000563418 ABCA2Q9BZC7 2435 aa4.1□□□□□ -1.75
CLK3-212ENST00000563418 ZCCHC13Q8WW36 166 aaKnown RBP4.1□□□□□ -1.75
CLK3-212ENST00000563418 PIEZO2Q9H5I5 2752 aa4.1□□□□□ -1.75
CLK3-212ENST00000563418 PRR26Q8N8Z3 221 aa4.1□□□□□ -1.75
CLK3-212ENST00000563418 C15orf56Q8N910 161 aa4.1□□□□□ -1.75
CLK3-212ENST00000563418 LCE6AA0A183 80 aa4.1□□□□□ -1.75
CLK3-212ENST00000563418 CHTF8P0CG12 524 aa4.1□□□□□ -1.75
CLK3-212ENST00000563418 PRR34Q9NV39 138 aa4.09□□□□□ -1.75
CLK3-212ENST00000563418 TLX1NBP0CAT3 122 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms