RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-206	ENST00000563343		Q6ZN92	141 aa		4.17	□□□□□ -1.74
HERPUD1-206	ENST00000563343	FAM19A1	Q7Z5A9	133 aa		4.17	□□□□□ -1.74
HERPUD1-206	ENST00000563343	C20orf78	Q9BR46	151 aa		4.17	□□□□□ -1.74
HERPUD1-206	ENST00000563343	TMEM126A	Q9H061	195 aa		4.17	□□□□□ -1.74
HERPUD1-206	ENST00000563343	PYGO1	Q9Y3Y4	419 aa		4.17	□□□□□ -1.74
HERPUD1-206	ENST00000563343	SYNE2	Q8WXH0	6885 aa	Known RBP	4.17	□□□□□ -1.74
HERPUD1-206	ENST00000563343	MACF1	Q9UPN3	7388 aa	Known RBP	4.17	□□□□□ -1.74
HERPUD1-206	ENST00000563343	HIGD1C	A8MV81	97 aa		4.16	□□□□□ -1.74
HERPUD1-206	ENST00000563343	TMEM250	H0YL14	139 aa		4.16	□□□□□ -1.74
HERPUD1-206	ENST00000563343		M0R378	163 aa		4.16	□□□□□ -1.74
HERPUD1-206	ENST00000563343	RPS29	P62273	56 aa	Known RBP	4.16	□□□□□ -1.74
HERPUD1-206	ENST00000563343	MRPL51	Q4U2R6	128 aa	Known RBP	4.16	□□□□□ -1.74
HERPUD1-206	ENST00000563343	C6orf226	Q5I0X4	101 aa		4.16	□□□□□ -1.74
HERPUD1-206	ENST00000563343	BORCS7	Q96B45	105 aa		4.16	□□□□□ -1.74
HERPUD1-206	ENST00000563343	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.16	□□□□□ -1.74
HERPUD1-206	ENST00000563343	SMIM2	Q9BVW6	85 aa		4.16	□□□□□ -1.74
HERPUD1-206	ENST00000563343	GNB1L	Q9BYB4	327 aa		4.16	□□□□□ -1.74
HERPUD1-206	ENST00000563343	KRTAP9-8	Q9BYQ0	159 aa		4.16	□□□□□ -1.74
HERPUD1-206	ENST00000563343	NDUFA12	Q9UI09	145 aa		4.16	□□□□□ -1.74
HERPUD1-206	ENST00000563343	TCAP	O15273	167 aa		4.15	□□□□□ -1.75
HERPUD1-206	ENST00000563343	FABP9	Q0Z7S8	132 aa		4.15	□□□□□ -1.75
HERPUD1-206	ENST00000563343	ZC2HC1B	Q5TFG8	222 aa		4.15	□□□□□ -1.75
HERPUD1-206	ENST00000563343	FAM19A3	Q7Z5A8	133 aa		4.15	□□□□□ -1.75
HERPUD1-206	ENST00000563343	FAM19A2	Q8N3H0	131 aa		4.15	□□□□□ -1.75
HERPUD1-206	ENST00000563343	NKAPP1	Q8N9T2	125 aa		4.15	□□□□□ -1.75
HERPUD1-206	ENST00000563343	TMEM141	Q96I45	108 aa		4.15	□□□□□ -1.75
HERPUD1-206	ENST00000563343	SRP19	P09132	144 aa	Known RBP	4.14	□□□□□ -1.75
HERPUD1-206	ENST00000563343	IFI27	P40305	119 aa	Predicted RBP	4.14	□□□□□ -1.75
HERPUD1-206	ENST00000563343	SNRPE	P62304	92 aa	Known RBP	4.14	□□□□□ -1.75
HERPUD1-206	ENST00000563343	FAM104B	Q5XKR9	115 aa		4.14	□□□□□ -1.75
HERPUD1-206	ENST00000563343	YPEL4	Q96NS1	127 aa		4.14	□□□□□ -1.75
HERPUD1-206	ENST00000563343	AMELX	Q99217	191 aa		4.14	□□□□□ -1.75
HERPUD1-206	ENST00000563343	HIGD2A	Q9BW72	106 aa		4.14	□□□□□ -1.75
HERPUD1-206	ENST00000563343	TRAV9-1	A0A075B6T8	112 aa		4.13	□□□□□ -1.75
HERPUD1-206	ENST00000563343	PCP4L1	A6NKN8	68 aa		4.13	□□□□□ -1.75
HERPUD1-206	ENST00000563343	TSTD3	H0UI37	97 aa		4.13	□□□□□ -1.75
HERPUD1-206	ENST00000563343	VPREB1	P12018	145 aa		4.13	□□□□□ -1.75
HERPUD1-206	ENST00000563343	CXCL5	P42830	114 aa		4.13	□□□□□ -1.75
HERPUD1-206	ENST00000563343	NAT8	Q9UHE5	227 aa		4.13	□□□□□ -1.75
HERPUD1-206	ENST00000563343		C9JQL5	133 aa		4.12	□□□□□ -1.75
HERPUD1-206	ENST00000563343	SLC25A20	O43772	301 aa		4.12	□□□□□ -1.75
HERPUD1-206	ENST00000563343	NPY	P01303	97 aa		4.12	□□□□□ -1.75
HERPUD1-206	ENST00000563343	RIG	Q13278	110 aa		4.12	□□□□□ -1.75
HERPUD1-206	ENST00000563343	COA6	Q5JTJ3	125 aa	Known RBP	4.12	□□□□□ -1.75
HERPUD1-206	ENST00000563343	C2orf66	Q6UXQ4	117 aa		4.12	□□□□□ -1.75
HERPUD1-206	ENST00000563343	TEX43	Q6ZNM6	134 aa		4.12	□□□□□ -1.75
HERPUD1-206	ENST00000563343		Q8NDZ9	215 aa		4.12	□□□□□ -1.75
HERPUD1-206	ENST00000563343	CDKN2A-AS1	Q9UH64	79 aa		4.12	□□□□□ -1.75
HERPUD1-206	ENST00000563343	CFC1	P0CG37	223 aa		4.11	□□□□□ -1.75
HERPUD1-206	ENST00000563343	CKS2	P33552	79 aa		4.11	□□□□□ -1.75
HERPUD1-206	ENST00000563343	COX19	Q49B96	90 aa		4.11	□□□□□ -1.75
HERPUD1-206	ENST00000563343	LINC00483	Q53H64	154 aa		4.11	□□□□□ -1.75
HERPUD1-206	ENST00000563343	COX6B2	Q6YFQ2	88 aa		4.11	□□□□□ -1.75
HERPUD1-206	ENST00000563343	SMIM1	B2RUZ4	78 aa		4.1	□□□□□ -1.75
HERPUD1-206	ENST00000563343	SMIM7	Q9BQ49	75 aa		4.1	□□□□□ -1.75
HERPUD1-206	ENST00000563343	C2orf88	Q9BSF0	95 aa		4.1	□□□□□ -1.75
HERPUD1-206	ENST00000563343	OSTC	Q9NRP0	149 aa		4.1	□□□□□ -1.75
HERPUD1-206	ENST00000563343	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.1	□□□□□ -1.75
HERPUD1-206	ENST00000563343		V9GYV3	84 aa		4.1	□□□□□ -1.75
HERPUD1-206	ENST00000563343		D6R8Y8	96 aa		4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	HIST1H2BK	O60814	126 aa		4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	HIST1H2BJ	P06899	126 aa		4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	HIST1H2BO	P23527	126 aa		4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	HIST1H2BB	P33778	126 aa		4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	HIST1H2BD	P58876	126 aa		4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	HIST1H2BC	P62807	126 aa		4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	HIST2H2BE	Q16778	126 aa		4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	LINC01551	Q86U37	167 aa		4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	HIST3H2BB	Q8N257	126 aa		4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	HIST1H2BH	Q93079	126 aa		4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	HIST1H2BN	Q99877	126 aa		4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	HIST1H2BM	Q99879	126 aa		4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	GEMIN7	Q9H840	131 aa	Known RBP	4.09	□□□□□ -1.75
HERPUD1-206	ENST00000563343	IGIP	A6NJ69	53 aa		4.08	□□□□□ -1.76
HERPUD1-206	ENST00000563343	HERVK_113	P63121	156 aa		4.08	□□□□□ -1.76
HERPUD1-206	ENST00000563343	MOBP	Q13875	183 aa		4.08	□□□□□ -1.76
HERPUD1-206	ENST00000563343	JOSD1	Q15040	202 aa	Predicted RBP	4.08	□□□□□ -1.76
HERPUD1-206	ENST00000563343	SSBP3-AS1	Q7Z2R9	100 aa		4.08	□□□□□ -1.76
HERPUD1-206	ENST00000563343	COX7B2	Q8TF08	81 aa		4.08	□□□□□ -1.76
HERPUD1-206	ENST00000563343	C9orf92	A6NGG3	77 aa		4.07	□□□□□ -1.76
HERPUD1-206	ENST00000563343	LINC00587	B1AMM8	73 aa		4.07	□□□□□ -1.76
HERPUD1-206	ENST00000563343	CEBPG	P53567	150 aa		4.07	□□□□□ -1.76
HERPUD1-206	ENST00000563343	NDUFA6	P56556	154 aa		4.07	□□□□□ -1.76
HERPUD1-206	ENST00000563343	ADIRF	Q15847	76 aa		4.07	□□□□□ -1.76
HERPUD1-206	ENST00000563343	KRTAP6-3	Q3LI67	103 aa		4.07	□□□□□ -1.76
HERPUD1-206	ENST00000563343	PYY3	Q5JQD4	70 aa		4.07	□□□□□ -1.76
HERPUD1-206	ENST00000563343	SMCR5	Q8TEV8	140 aa		4.07	□□□□□ -1.76
HERPUD1-206	ENST00000563343	VCX2	Q9H322	139 aa		4.07	□□□□□ -1.76
HERPUD1-206	ENST00000563343	TRGC2	P03986	189 aa		4.06	□□□□□ -1.76
HERPUD1-206	ENST00000563343	DDT	P30046	118 aa		4.06	□□□□□ -1.76
HERPUD1-206	ENST00000563343	RPL23	P62829	140 aa	Known RBP	4.06	□□□□□ -1.76
HERPUD1-206	ENST00000563343	SEC11A	P67812	179 aa		4.06	□□□□□ -1.76
HERPUD1-206	ENST00000563343	PDZD11	Q5EBL8	140 aa		4.06	□□□□□ -1.76
HERPUD1-206	ENST00000563343	HIST1H2BL	Q99880	126 aa		4.06	□□□□□ -1.76
HERPUD1-206	ENST00000563343	SND1-IT1	Q9HBX3	110 aa		4.06	□□□□□ -1.76
HERPUD1-206	ENST00000563343	NAT8B	Q9UHF3	227 aa		4.06	□□□□□ -1.76
HERPUD1-206	ENST00000563343	IGLV5-45	A0A087WSX0	123 aa		4.05	□□□□□ -1.76
HERPUD1-206	ENST00000563343	IGLV9-49	A0A0B4J1Y8	123 aa		4.05	□□□□□ -1.76
HERPUD1-206	ENST00000563343		A0A1B0GXF2	115 aa		4.05	□□□□□ -1.76

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