RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 MUC4Q99102 2169 aa1.14□□□□□ -2.23
SHCBP1-202ENST00000563219 DLEC1Q9Y238 1755 aa1.13□□□□□ -2.23
SHCBP1-202ENST00000563219 ZGRF1Q86YA3 2104 aa1.13□□□□□ -2.23
SHCBP1-202ENST00000563219 FBN3Q75N90 2809 aa1.13□□□□□ -2.23
SHCBP1-202ENST00000563219 LY75O60449 1722 aa1.13□□□□□ -2.23
SHCBP1-202ENST00000563219 NRAPQ86VF7 1730 aa1.13□□□□□ -2.23
SHCBP1-202ENST00000563219 K7EMI3 77 aa1.13□□□□□ -2.23
SHCBP1-202ENST00000563219 SPINK4O60575 86 aa1.13□□□□□ -2.23
SHCBP1-202ENST00000563219 ZNF137PP52743 207 aa1.13□□□□□ -2.23
SHCBP1-202ENST00000563219 FXYD6P3P58550 94 aa1.13□□□□□ -2.23
SHCBP1-202ENST00000563219 RPL37AP61513 92 aaKnown RBP1.13□□□□□ -2.23
SHCBP1-202ENST00000563219 IQGAP1P46940 1657 aa1.13□□□□□ -2.23
SHCBP1-202ENST00000563219 KIF21BO75037 1637 aa1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 TRGV1A0A0A0MS02 117 aa1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 M0R1W7 72 aa1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 IL9P15248 144 aa1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 SPINK7P58062 85 aa1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 FXYD4P59646 89 aa1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 RPL38P63173 70 aaKnown RBP1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 KRTAP21-3Q3LHN1 58 aa1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 SPATA8Q6RVD6 105 aa1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 SPRR4Q96PI1 79 aa1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 PLAC8Q9NZF1 115 aa1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 GCC2Q8IWJ2 1684 aa1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 NINQ8N4C6 2090 aa1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 PRRC2BQ5JSZ5 2229 aaKnown RBP1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 DDX60Q8IY21 1712 aaKnown RBP1.12□□□□□ -2.23
SHCBP1-202ENST00000563219 TULP4Q9NRJ4 1543 aa1.11□□□□□ -2.23
SHCBP1-202ENST00000563219 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.11□□□□□ -2.23
SHCBP1-202ENST00000563219 I3L3M4 83 aa1.11□□□□□ -2.23
SHCBP1-202ENST00000563219 FREM3P0C091 2139 aa1.11□□□□□ -2.23
SHCBP1-202ENST00000563219 ARL14EPLP0DKL9 152 aa1.11□□□□□ -2.23
SHCBP1-202ENST00000563219 ACYP2P14621 99 aa1.11□□□□□ -2.23
SHCBP1-202ENST00000563219 HAMPP81172 84 aa1.11□□□□□ -2.23
SHCBP1-202ENST00000563219 FXYD3Q14802 87 aa1.11□□□□□ -2.23
SHCBP1-202ENST00000563219 LINC00322Q6ZN03 302 aaPredicted RBP1.11□□□□□ -2.23
SHCBP1-202ENST00000563219 DEFB132Q7Z7B7 95 aa1.11□□□□□ -2.23
SHCBP1-202ENST00000563219 DOT1LQ8TEK3 1739 aa1.11□□□□□ -2.23
SHCBP1-202ENST00000563219 DEPDC5O75140 1603 aa1.11□□□□□ -2.23
SHCBP1-202ENST00000563219 NCOA6Q14686 2063 aaPredicted RBP1.11□□□□□ -2.23
SHCBP1-202ENST00000563219 NBDYA0A0U1RRE5 68 aa1.1□□□□□ -2.23
SHCBP1-202ENST00000563219 LCE6AA0A183 80 aa1.1□□□□□ -2.23
SHCBP1-202ENST00000563219 A0A1B0GU69 56 aa1.1□□□□□ -2.23
SHCBP1-202ENST00000563219 H0YGX0 51 aa1.1□□□□□ -2.23
SHCBP1-202ENST00000563219 NDUFA4O00483 81 aa1.1□□□□□ -2.23
SHCBP1-202ENST00000563219 NDUFA3O95167 84 aa1.1□□□□□ -2.23
SHCBP1-202ENST00000563219 C5orf56Q8N8D9 126 aa1.1□□□□□ -2.23
SHCBP1-202ENST00000563219 PI4KAP42356 2102 aa1.1□□□□□ -2.23
SHCBP1-202ENST00000563219 ZNF831Q5JPB2 1677 aa1.1□□□□□ -2.23
SHCBP1-202ENST00000563219 TOGARAM1Q9Y4F4 1720 aa1.09□□□□□ -2.23
SHCBP1-202ENST00000563219 SAMD9LQ8IVG5 1584 aa1.09□□□□□ -2.23
SHCBP1-202ENST00000563219 A0A087WTM6 91 aa1.09□□□□□ -2.23
SHCBP1-202ENST00000563219 LOC110117498A0A087WWA1 95 aa1.09□□□□□ -2.23
SHCBP1-202ENST00000563219 LINC01546A6NGU7 62 aa1.09□□□□□ -2.23
SHCBP1-202ENST00000563219 NCR3O14931 201 aa1.09□□□□□ -2.23
SHCBP1-202ENST00000563219 COX6B1P14854 86 aa1.09□□□□□ -2.23
SHCBP1-202ENST00000563219 COX7BP24311 80 aa1.09□□□□□ -2.23
SHCBP1-202ENST00000563219 Q96NJ1 140 aa1.09□□□□□ -2.23
SHCBP1-202ENST00000563219 TMEM167BQ9NRX6 74 aa1.09□□□□□ -2.23
SHCBP1-202ENST00000563219 UNC13CQ8NB66 2214 aa1.09□□□□□ -2.24
SHCBP1-202ENST00000563219 E9PCH4 1651 aa1.09□□□□□ -2.24
SHCBP1-202ENST00000563219 SLIT1O75093 1534 aa1.09□□□□□ -2.24
SHCBP1-202ENST00000563219 RP1L1Q8IWN7 2480 aaPredicted RBP1.08□□□□□ -2.24
SHCBP1-202ENST00000563219 LMO7Q8WWI1 1683 aa1.08□□□□□ -2.24
SHCBP1-202ENST00000563219 ETDCA0A1B0GVM5 59 aa1.08□□□□□ -2.24
SHCBP1-202ENST00000563219 IGIPA6NJ69 53 aa1.08□□□□□ -2.24
SHCBP1-202ENST00000563219 INE1O15225 51 aa1.08□□□□□ -2.24
SHCBP1-202ENST00000563219 MRPL33O75394 65 aaKnown RBP1.08□□□□□ -2.24
SHCBP1-202ENST00000563219 ANGP03950 147 aaKnown RBP1.08□□□□□ -2.24
SHCBP1-202ENST00000563219 DEFB114Q30KQ6 69 aa1.08□□□□□ -2.24
SHCBP1-202ENST00000563219 MYO7BQ6PIF6 2116 aa1.08□□□□□ -2.24
SHCBP1-202ENST00000563219 Q6ZQY7 126 aa1.08□□□□□ -2.24
SHCBP1-202ENST00000563219 LINC00472Q9H8W2 130 aa1.08□□□□□ -2.24
SHCBP1-202ENST00000563219 SPTBP11277 2137 aa1.07□□□□□ -2.24
SHCBP1-202ENST00000563219 ESPL1Q14674 2120 aa1.07□□□□□ -2.24
SHCBP1-202ENST00000563219 LRRC37A2A6NM11 1700 aa1.07□□□□□ -2.24
SHCBP1-202ENST00000563219 C4AP0C0L4 1744 aa1.07□□□□□ -2.24
SHCBP1-202ENST00000563219 M0R2N4 97 aa1.07□□□□□ -2.24
SHCBP1-202ENST00000563219 SSBP3-AS1Q7Z2R9 100 aa1.07□□□□□ -2.24
SHCBP1-202ENST00000563219 HELZ2Q9BYK8 2649 aaKnown RBP1.07□□□□□ -2.24
SHCBP1-202ENST00000563219 MED12Q93074 2177 aa1.07□□□□□ -2.24
SHCBP1-202ENST00000563219 LINC00959A0A1B0GUT2 108 aa1.06□□□□□ -2.24
SHCBP1-202ENST00000563219 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.06□□□□□ -2.24
SHCBP1-202ENST00000563219 SMIM11BQ8TCY0 68 aa1.06□□□□□ -2.24
SHCBP1-202ENST00000563219 CCL19Q99731 98 aa1.06□□□□□ -2.24
SHCBP1-202ENST00000563219 KCNQ1DNQ9H478 68 aa1.06□□□□□ -2.24
SHCBP1-202ENST00000563219 DUOX1Q9NRD9 1551 aa1.05□□□□□ -2.24
SHCBP1-202ENST00000563219 ZFHX3Q15911 3703 aa1.05□□□□□ -2.24
SHCBP1-202ENST00000563219 SPTY2D1-AS1A0A0U1RR47 76 aa1.05□□□□□ -2.24
SHCBP1-202ENST00000563219 CPSF4LA6NMK7 179 aaKnown RBP1.05□□□□□ -2.24
SHCBP1-202ENST00000563219 PIN1P1O15428 100 aa1.05□□□□□ -2.24
SHCBP1-202ENST00000563219 Q6ZRX8 168 aa1.05□□□□□ -2.24
SHCBP1-202ENST00000563219 TET1Q8NFU7 2136 aa1.05□□□□□ -2.24
SHCBP1-202ENST00000563219 PLAC4Q8WY50 150 aa1.05□□□□□ -2.24
SHCBP1-202ENST00000563219 C4BP0C0L5 1744 aa1.05□□□□□ -2.24
SHCBP1-202ENST00000563219 MYO7AQ13402 2215 aa1.05□□□□□ -2.24
SHCBP1-202ENST00000563219 A0A0G2JMZ2 1700 aa1.04□□□□□ -2.24
SHCBP1-202ENST00000563219 PLXNB2O15031 1838 aa1.04□□□□□ -2.24
SHCBP1-202ENST00000563219 KRTAP10-4P60372 401 aaPredicted RBP1.04□□□□□ -2.24
SHCBP1-202ENST00000563219 TECTAO75443 2155 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 181.3 ms