RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 IBA57-AS1B1ANH7 110 aa9.74□□□□□ -0.85
GTF3C1-203ENST00000562609 LY6G6DO95868 133 aa9.74□□□□□ -0.85
GTF3C1-203ENST00000562609 C11orf68Q9H3H3 251 aaKnown RBP9.74□□□□□ -0.85
GTF3C1-203ENST00000562609 MIFP14174 115 aa9.74□□□□□ -0.85
GTF3C1-203ENST00000562609 ATP5EP56381 51 aaPredicted RBP9.74□□□□□ -0.85
GTF3C1-203ENST00000562609 TRRAPQ9Y4A5 3859 aa9.74□□□□□ -0.85
GTF3C1-203ENST00000562609 M0R2N4 97 aa9.74□□□□□ -0.85
GTF3C1-203ENST00000562609 K7EQD1 137 aa9.73□□□□□ -0.85
GTF3C1-203ENST00000562609 Q8N3U1 123 aa9.73□□□□□ -0.85
GTF3C1-203ENST00000562609 A8MTW9 85 aa9.72□□□□□ -0.85
GTF3C1-203ENST00000562609 Q6ZQT0 140 aa9.72□□□□□ -0.85
GTF3C1-203ENST00000562609 Q6ZVQ6 151 aa9.72□□□□□ -0.85
GTF3C1-203ENST00000562609 INSP01308 110 aa9.72□□□□□ -0.85
GTF3C1-203ENST00000562609 TRBV7-4A0A0J9YYF1 115 aa9.71□□□□□ -0.85
GTF3C1-203ENST00000562609 UBE2L6O14933 153 aa9.71□□□□□ -0.85
GTF3C1-203ENST00000562609 KRTAP10-3P60369 221 aa9.71□□□□□ -0.85
GTF3C1-203ENST00000562609 INAFM1C9JVW0 142 aa9.71□□□□□ -0.86
GTF3C1-203ENST00000562609 PRR3P79522 188 aaKnown RBP9.71□□□□□ -0.86
GTF3C1-203ENST00000562609 C1orf158Q8N1D5 194 aa9.71□□□□□ -0.86
GTF3C1-203ENST00000562609 IL17DQ8TAD2 202 aa9.7□□□□□ -0.86
GTF3C1-203ENST00000562609 NANOS2P60321 138 aaKnown RBP9.69□□□□□ -0.86
GTF3C1-203ENST00000562609 TEP1Q99973 2627 aaKnown RBP9.68□□□□□ -0.86
GTF3C1-203ENST00000562609 TRGV1A0A0A0MS02 117 aa9.68□□□□□ -0.86
GTF3C1-203ENST00000562609 SCXQ7RTU7 201 aa9.68□□□□□ -0.86
GTF3C1-203ENST00000562609 TMEM254Q8TBM7 123 aa9.68□□□□□ -0.86
GTF3C1-203ENST00000562609 LAMTOR3Q9UHA4 124 aa9.68□□□□□ -0.86
GTF3C1-203ENST00000562609 SPATA3Q8NHX4 192 aa9.67□□□□□ -0.86
GTF3C1-203ENST00000562609 NREPQ16612 68 aa9.67□□□□□ -0.86
GTF3C1-203ENST00000562609 F8P00451 2351 aa9.66□□□□□ -0.86
GTF3C1-203ENST00000562609 TRBV10-1A0A0K0K1A3 114 aa9.66□□□□□ -0.86
GTF3C1-203ENST00000562609 CXCL6P80162 114 aa9.66□□□□□ -0.86
GTF3C1-203ENST00000562609 LOC110117498A0A087WWA1 95 aa9.65□□□□□ -0.86
GTF3C1-203ENST00000562609 IGHV3OR16-9A0A0B4J2B5 98 aa9.65□□□□□ -0.86
GTF3C1-203ENST00000562609 IGLV1-51P01701 117 aa9.65□□□□□ -0.86
GTF3C1-203ENST00000562609 GIG44P09565 113 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-203ENST00000562609 ESRGQ1W209 222 aa9.65□□□□□ -0.86
GTF3C1-203ENST00000562609 C6orf226Q5I0X4 101 aa9.65□□□□□ -0.86
GTF3C1-203ENST00000562609 PMAIP1Q13794 54 aa9.64□□□□□ -0.87
GTF3C1-203ENST00000562609 C6orf99Q4VX62 202 aa9.64□□□□□ -0.87
GTF3C1-203ENST00000562609 NOP10Q9NPE3 64 aaKnown RBP9.64□□□□□ -0.87
GTF3C1-203ENST00000562609 A0A087WZ39 114 aa9.63□□□□□ -0.87
GTF3C1-203ENST00000562609 ZNF561-AS1K7EIQ3 104 aa9.63□□□□□ -0.87
GTF3C1-203ENST00000562609 C19orf73Q9NVV2 129 aa9.63□□□□□ -0.87
GTF3C1-203ENST00000562609 IGLV4-60A0A075B6I1 120 aa9.62□□□□□ -0.87
GTF3C1-203ENST00000562609 BPY2O14599 106 aa9.61□□□□□ -0.87
GTF3C1-203ENST00000562609 C6orf223Q8N319 242 aa9.61□□□□□ -0.87
GTF3C1-203ENST00000562609 FUSP35637 526 aaKnown RBP eCLIP9.61□□□□□ -0.87
GTF3C1-203ENST00000562609 PLAC8L1A1L4L8 177 aa9.6□□□□□ -0.87
GTF3C1-203ENST00000562609 LINC00575Q6W349 94 aa9.6□□□□□ -0.87
GTF3C1-203ENST00000562609 PRYO14603 147 aa9.6□□□□□ -0.87
GTF3C1-203ENST00000562609 PRR15Q8IV56 129 aa9.59□□□□□ -0.87
GTF3C1-203ENST00000562609 LOC100131303A0A0U1RQF7 123 aa9.58□□□□□ -0.88
GTF3C1-203ENST00000562609 Q6ZTC4 211 aa9.57□□□□□ -0.88
GTF3C1-203ENST00000562609 TRGV2A0A075B6R0 118 aa9.57□□□□□ -0.88
GTF3C1-203ENST00000562609 ERC2-IT1O76042 136 aa9.57□□□□□ -0.88
GTF3C1-203ENST00000562609 CSNK1G2-AS1Q8NCQ2 148 aa9.56□□□□□ -0.88
GTF3C1-203ENST00000562609 STAB1Q9NY15 2570 aa9.56□□□□□ -0.88
GTF3C1-203ENST00000562609 LRCOL1A6NCL2 159 aa9.55□□□□□ -0.88
GTF3C1-203ENST00000562609 MUC7Q8TAX7 377 aa9.55□□□□□ -0.88
GTF3C1-203ENST00000562609 PDE6GP18545 87 aa9.55□□□□□ -0.88
GTF3C1-203ENST00000562609 C9orf66Q5T8R8 295 aa9.55□□□□□ -0.88
GTF3C1-203ENST00000562609 Q8N9L7 120 aa9.55□□□□□ -0.88
GTF3C1-203ENST00000562609 Q6ZRU5 148 aa9.55□□□□□ -0.88
GTF3C1-203ENST00000562609 Q6ZQY7 126 aa9.54□□□□□ -0.88
GTF3C1-203ENST00000562609 DAD1P61803 113 aa9.54□□□□□ -0.88
GTF3C1-203ENST00000562609 PKD1L1Q8TDX9 2849 aa9.53□□□□□ -0.88
GTF3C1-203ENST00000562609 HIGD2AQ9BW72 106 aa9.53□□□□□ -0.88
GTF3C1-203ENST00000562609 LINC00959A0A1B0GUT2 108 aa9.53□□□□□ -0.88
GTF3C1-203ENST00000562609 DEFB130BP0DP73 79 aa9.53□□□□□ -0.88
GTF3C1-203ENST00000562609 DEFB130AP0DP74 79 aa9.53□□□□□ -0.88
GTF3C1-203ENST00000562609 CMC4P56277 68 aaPredicted RBP9.52□□□□□ -0.88
GTF3C1-203ENST00000562609 Q8NDZ9 215 aa9.52□□□□□ -0.88
GTF3C1-203ENST00000562609 C16orf74Q96GX8 76 aa9.52□□□□□ -0.89
GTF3C1-203ENST00000562609 OCR1Q9BZK8 76 aa9.51□□□□□ -0.89
GTF3C1-203ENST00000562609 CD164L2Q6UWJ8 174 aa9.51□□□□□ -0.89
GTF3C1-203ENST00000562609 Q8IZM0 81 aa9.51□□□□□ -0.89
GTF3C1-203ENST00000562609 MAST4O15021 2626 aa9.51□□□□□ -0.89
GTF3C1-203ENST00000562609 DEFB4AO15263 64 aa9.5□□□□□ -0.89
GTF3C1-203ENST00000562609 TRBV6-8A0A0A6YYG3 113 aa9.5□□□□□ -0.89
GTF3C1-203ENST00000562609 TRGV4A0A0C4DH28 118 aa9.5□□□□□ -0.89
GTF3C1-203ENST00000562609 C9orf116Q5BN46 136 aaPredicted RBP9.5□□□□□ -0.89
GTF3C1-203ENST00000562609 Q6ZRP5 223 aa9.49□□□□□ -0.89
GTF3C1-203ENST00000562609 FBN1P35555 2871 aaKnown RBP9.49□□□□□ -0.89
GTF3C1-203ENST00000562609 hDV103S1A0JD37 113 aa9.49□□□□□ -0.89
GTF3C1-203ENST00000562609 RETNQ9HD89 108 aa9.48□□□□□ -0.89
GTF3C1-203ENST00000562609 CLPSL2Q6UWE3 100 aa9.48□□□□□ -0.89
GTF3C1-203ENST00000562609 PSPHP1O15172 72 aa9.47□□□□□ -0.89
GTF3C1-203ENST00000562609 IGKV4-1P06312 121 aa9.46□□□□□ -0.89
GTF3C1-203ENST00000562609 DEFB135Q30KP9 77 aa9.46□□□□□ -0.89
GTF3C1-203ENST00000562609 Q1T7F1 81 aa9.46□□□□□ -0.9
GTF3C1-203ENST00000562609 A0A096LPF7 62 aa9.45□□□□□ -0.9
GTF3C1-203ENST00000562609 CD164Q04900 197 aa9.45□□□□□ -0.9
GTF3C1-203ENST00000562609 COX17Q14061 63 aa9.45□□□□□ -0.9
GTF3C1-203ENST00000562609 NOTCH1P46531 2555 aa9.44□□□□□ -0.9
GTF3C1-203ENST00000562609 LINC00269Q8N2A0 174 aa9.44□□□□□ -0.9
GTF3C1-203ENST00000562609 C1orf64Q8NEQ6 169 aa9.44□□□□□ -0.9
GTF3C1-203ENST00000562609 X6R8D5 127 aa9.44□□□□□ -0.9
GTF3C1-203ENST00000562609 COL6A5A8TX70 2615 aa9.42□□□□□ -0.9
GTF3C1-203ENST00000562609 KIAA0087Q14695 138 aa9.42□□□□□ -0.9
GTF3C1-203ENST00000562609 ANK2Q01484 3957 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms