RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 ZNF815PA8K554 130 aa10.21□□□□□ -0.77
USB1-206ENST00000562534 M0QXV9 152 aa10.21□□□□□ -0.77
USB1-206ENST00000562534 ANKRD39Q53RE8 183 aa10.21□□□□□ -0.77
USB1-206ENST00000562534 MIR7-3HGQ8N6C7 128 aa10.21□□□□□ -0.77
USB1-206ENST00000562534 TP73-AS1Q9UF72 201 aa10.21□□□□□ -0.77
USB1-206ENST00000562534 HERC2O95714 4834 aa10.21□□□□□ -0.78
USB1-206ENST00000562534 KRTAP4-5Q9BYR2 181 aa10.2□□□□□ -0.78
USB1-206ENST00000562534 IGLV5-37A0A075B6J1 123 aa10.19□□□□□ -0.78
USB1-206ENST00000562534 NKAPP1Q8N9T2 125 aa10.19□□□□□ -0.78
USB1-206ENST00000562534 TIMM17BO60830 172 aa10.18□□□□□ -0.78
USB1-206ENST00000562534 MRPL55Q7Z7F7 128 aaKnown RBP10.18□□□□□ -0.78
USB1-206ENST00000562534 LOC107984156A0A0G2JMH3 177 aa10.17□□□□□ -0.78
USB1-206ENST00000562534 UBE2BP63146 152 aa10.17□□□□□ -0.78
USB1-206ENST00000562534 JOSD1Q15040 202 aaPredicted RBP10.17□□□□□ -0.78
USB1-206ENST00000562534 ARL17AQ8IVW1 177 aa10.17□□□□□ -0.78
USB1-206ENST00000562534 VPREB1P12018 145 aa10.16□□□□□ -0.78
USB1-206ENST00000562534 KRTAP10-4P60372 401 aaPredicted RBP10.16□□□□□ -0.78
USB1-206ENST00000562534 TTTY13Q9BZ97 58 aa10.16□□□□□ -0.78
USB1-206ENST00000562534 ADAMTSL4-AS1Q5T5F5 129 aa10.15□□□□□ -0.78
USB1-206ENST00000562534 SCGB1D4Q6XE38 83 aa10.15□□□□□ -0.78
USB1-206ENST00000562534 BOD1L2Q8IYS8 172 aa10.15□□□□□ -0.78
USB1-206ENST00000562534 DAND5Q8N907 189 aa10.15□□□□□ -0.78
USB1-206ENST00000562534 LINC00167Q96N53 147 aa10.15□□□□□ -0.78
USB1-206ENST00000562534 MIEN1Q9BRT3 115 aa10.15□□□□□ -0.78
USB1-206ENST00000562534 INAFM2P0DMQ5 153 aa10.14□□□□□ -0.79
USB1-206ENST00000562534 PRR3P79522 188 aaKnown RBP10.14□□□□□ -0.79
USB1-206ENST00000562534 PCP2Q8IVA1 136 aa10.14□□□□□ -0.79
USB1-206ENST00000562534 PSORS1C2Q9UIG4 136 aa10.14□□□□□ -0.79
USB1-206ENST00000562534 LITAFQ99732 161 aa10.12□□□□□ -0.79
USB1-206ENST00000562534 TMEM238C9JI98 176 aa10.11□□□□□ -0.79
USB1-206ENST00000562534 M0R378 163 aa10.11□□□□□ -0.79
USB1-206ENST00000562534 C1orf137Q5JT78 98 aa10.11□□□□□ -0.79
USB1-206ENST00000562534 FAT1Q14517 4588 aa10.1□□□□□ -0.79
USB1-206ENST00000562534 GAGE10A6NGK3 116 aa10.1□□□□□ -0.79
USB1-206ENST00000562534 RPL37AP8A6NKH3 93 aa10.1□□□□□ -0.79
USB1-206ENST00000562534 NDUFC2O95298 119 aa10.1□□□□□ -0.79
USB1-206ENST00000562534 Q6ZVH6 145 aa10.1□□□□□ -0.79
USB1-206ENST00000562534 KRTAP11-1Q8IUC1 163 aa10.1□□□□□ -0.79
USB1-206ENST00000562534 Q8NDZ9 215 aa10.1□□□□□ -0.79
USB1-206ENST00000562534 IGLV1-50A0A075B6I6 118 aa10.09□□□□□ -0.79
USB1-206ENST00000562534 COPS9Q8WXC6 57 aa10.09□□□□□ -0.79
USB1-206ENST00000562534 LINC00308Q8TCZ7 52 aa10.08□□□□□ -0.8
USB1-206ENST00000562534 VAMP8Q9BV40 100 aa10.08□□□□□ -0.8
USB1-206ENST00000562534 SPANXDQ9BXN6 97 aa10.08□□□□□ -0.8
USB1-206ENST00000562534 SPANXCQ9NY87 97 aa10.08□□□□□ -0.8
USB1-206ENST00000562534 SRRM2Q9UQ35 2752 aaKnown RBP10.08□□□□□ -0.8
USB1-206ENST00000562534 TRBV10-2A0A0K0K1G8 114 aa10.07□□□□□ -0.8
USB1-206ENST00000562534 IFITM1P13164 125 aa10.07□□□□□ -0.8
USB1-206ENST00000562534 NPC2P61916 151 aa10.07□□□□□ -0.8
USB1-206ENST00000562534 IGLV7-43P04211 117 aa10.06□□□□□ -0.8
USB1-206ENST00000562534 COX8AP10176 69 aa10.06□□□□□ -0.8
USB1-206ENST00000562534 SRSF9Q13242 221 aaKnown RBP eCLIP10.06□□□□□ -0.8
USB1-206ENST00000562534 SPATA45Q537H7 98 aa10.06□□□□□ -0.8
USB1-206ENST00000562534 PYY3Q5JQD4 70 aa10.06□□□□□ -0.8
USB1-206ENST00000562534 SPINK6Q6UWN8 80 aa10.06□□□□□ -0.8
USB1-206ENST00000562534 SOSTDC1Q6X4U4 206 aa10.06□□□□□ -0.8
USB1-206ENST00000562534 PAM16Q9Y3D7 125 aa10.06□□□□□ -0.8
USB1-206ENST00000562534 IGKV2-28A0A075B6P5 120 aa10.05□□□□□ -0.8
USB1-206ENST00000562534 DLEU1O43261 78 aa10.05□□□□□ -0.8
USB1-206ENST00000562534 IGKV2D-28P01615 120 aa10.05□□□□□ -0.8
USB1-206ENST00000562534 PPDPFQ9H3Y8 114 aa10.05□□□□□ -0.8
USB1-206ENST00000562534 SPANXB1Q9NS25 103 aaPredicted RBP10.05□□□□□ -0.8
USB1-206ENST00000562534 VPS13BQ7Z7G8 4022 aa10.04□□□□□ -0.8
USB1-206ENST00000562534 NCR3O14931 201 aa10.04□□□□□ -0.8
USB1-206ENST00000562534 EIF4EBP3O60516 100 aaPredicted RBP10.04□□□□□ -0.8
USB1-206ENST00000562534 HNRNPA3P51991 378 aaKnown RBP10.04□□□□□ -0.8
USB1-206ENST00000562534 S100A12P80511 92 aa10.04□□□□□ -0.8
USB1-206ENST00000562534 BCE1O60756 84 aa10.03□□□□□ -0.8
USB1-206ENST00000562534 LINC00518Q8N0U6 118 aa10.03□□□□□ -0.8
USB1-206ENST00000562534 REG3GQ6UW15 175 aa10.02□□□□□ -0.81
USB1-206ENST00000562534 C14orf144Q96I85 54 aa10.02□□□□□ -0.81
USB1-206ENST00000562534 S100A7L2Q5SY68 101 aa10.01□□□□□ -0.81
USB1-206ENST00000562534 MUSTN1Q8IVN3 82 aa10.01□□□□□ -0.81
USB1-206ENST00000562534 ZNF861PO60384 105 aa10□□□□□ -0.81
USB1-206ENST00000562534 DDTP30046 118 aa10□□□□□ -0.81
USB1-206ENST00000562534 SLC25A34Q6PIV7 304 aa10□□□□□ -0.81
USB1-206ENST00000562534 TMEM126AQ9H061 195 aa10□□□□□ -0.81
USB1-206ENST00000562534 KCNQ1DNQ9H478 68 aa10□□□□□ -0.81
USB1-206ENST00000562534 CBY1Q9Y3M2 126 aa10□□□□□ -0.81
USB1-206ENST00000562534 TRBV10-3A0A0K0K1G6 114 aa9.99□□□□□ -0.81
USB1-206ENST00000562534 RPL28P46779 137 aaKnown RBP9.99□□□□□ -0.81
USB1-206ENST00000562534 DIRC1Q969H9 104 aa9.99□□□□□ -0.81
USB1-206ENST00000562534 PRYO14603 147 aa9.98□□□□□ -0.81
USB1-206ENST00000562534 IGLV6-57P01721 117 aa9.97□□□□□ -0.81
USB1-206ENST00000562534 UBE2AP49459 152 aa9.97□□□□□ -0.81
USB1-206ENST00000562534 OXTP01178 125 aa9.96□□□□□ -0.82
USB1-206ENST00000562534 FAM19A1Q7Z5A9 133 aa9.96□□□□□ -0.82
USB1-206ENST00000562534 OR13C6PQ8NH95 151 aa9.96□□□□□ -0.82
USB1-206ENST00000562534 HIST1H4GQ99525 98 aa9.96□□□□□ -0.82
USB1-206ENST00000562534 HIGD1BQ9P298 99 aa9.96□□□□□ -0.82
USB1-206ENST00000562534 ABCA13Q86UQ4 5058 aa9.96□□□□□ -0.82
USB1-206ENST00000562534 H0Y9J4 135 aa9.94□□□□□ -0.82
USB1-206ENST00000562534 SPRR1AP35321 89 aa9.94□□□□□ -0.82
USB1-206ENST00000562534 LINC00337Q8N6G1 96 aa9.94□□□□□ -0.82
USB1-206ENST00000562534 PCLOQ9Y6V0 5065 aa9.93□□□□□ -0.82
USB1-206ENST00000562534 KRTAP29-1A8MX34 341 aaPredicted RBP9.93□□□□□ -0.82
USB1-206ENST00000562534 ETDCA0A1B0GVM5 59 aa9.92□□□□□ -0.82
USB1-206ENST00000562534 KRTAP13-1Q8IUC0 172 aa9.92□□□□□ -0.82
USB1-206ENST00000562534 TRAV23DV6A0A075B6W5 121 aa9.91□□□□□ -0.82
USB1-206ENST00000562534 TRAV13-2A0A0B4J235 113 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms