RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 COX17Q14061 63 aa6.58□□□□□ -1.36
LPCAT4-202ENST00000562404 ANAPC11Q9NYG5 84 aa6.58□□□□□ -1.36
LPCAT4-202ENST00000562404 TMEM238C9JI98 176 aa6.57□□□□□ -1.36
LPCAT4-202ENST00000562404 TSPEAR-AS2P59090 65 aa6.57□□□□□ -1.36
LPCAT4-202ENST00000562404 LEPROTL1O95214 131 aa6.56□□□□□ -1.36
LPCAT4-202ENST00000562404 SMIM13P0DJ93 91 aa6.56□□□□□ -1.36
LPCAT4-202ENST00000562404 RPL28P46779 137 aaKnown RBP6.56□□□□□ -1.36
LPCAT4-202ENST00000562404 LINC00158P58513 81 aa6.56□□□□□ -1.36
LPCAT4-202ENST00000562404 M0R378 163 aa6.55□□□□□ -1.36
LPCAT4-202ENST00000562404 FABP4P15090 132 aa6.55□□□□□ -1.36
LPCAT4-202ENST00000562404 PRLHP81277 87 aa6.55□□□□□ -1.36
LPCAT4-202ENST00000562404 PMCHL2Q9BQD1 86 aa6.55□□□□□ -1.36
LPCAT4-202ENST00000562404 TMEM126AQ9H061 195 aa6.55□□□□□ -1.36
LPCAT4-202ENST00000562404 RPL24P83731 157 aaKnown RBP6.54□□□□□ -1.36
LPCAT4-202ENST00000562404 KRTAP13-2Q52LG2 175 aa6.54□□□□□ -1.36
LPCAT4-202ENST00000562404 SFTA2Q6UW10 78 aa6.54□□□□□ -1.36
LPCAT4-202ENST00000562404 RPL13AP40429 203 aaKnown RBP6.53□□□□□ -1.36
LPCAT4-202ENST00000562404 UBE2AP49459 152 aa6.53□□□□□ -1.36
LPCAT4-202ENST00000562404 MIR7-3HGQ8N6C7 128 aa6.53□□□□□ -1.36
LPCAT4-202ENST00000562404 NDUFA12Q9UI09 145 aa6.53□□□□□ -1.36
LPCAT4-202ENST00000562404 MEIG1Q5JSS6 88 aa6.52□□□□□ -1.37
LPCAT4-202ENST00000562404 FAM19A1Q7Z5A9 133 aa6.52□□□□□ -1.37
LPCAT4-202ENST00000562404 DAND5Q8N907 189 aa6.51□□□□□ -1.37
LPCAT4-202ENST00000562404 NCR3O14931 201 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 LEPROTO15243 131 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 HIST1H2BKO60814 126 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 HIST1H2BJP06899 126 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 CRYGAP11844 174 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 HIST1H2BOP23527 126 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 HIST1H2BBP33778 126 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 HIST1H2BDP58876 126 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 HIST1H2BCP62807 126 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 HERV-K104P63124 156 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 HIST2H2BEQ16778 126 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 BOD1L2Q8IYS8 172 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 HIST1H2BHQ93079 126 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 HIST1H2BNQ99877 126 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 HIST1H2BMQ99879 126 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 HSPB8Q9UJY1 196 aa6.5□□□□□ -1.37
LPCAT4-202ENST00000562404 MYMXA0A1B0GTQ4 84 aa6.49□□□□□ -1.37
LPCAT4-202ENST00000562404 DPM2O94777 84 aa6.49□□□□□ -1.37
LPCAT4-202ENST00000562404 TSPAN13O95857 204 aa6.49□□□□□ -1.37
LPCAT4-202ENST00000562404 TYMSOSQ8TAI1 123 aa6.49□□□□□ -1.37
LPCAT4-202ENST00000562404 PLEKHB2Q96CS7 222 aa6.49□□□□□ -1.37
LPCAT4-202ENST00000562404 J3QQQ9 107 aa6.48□□□□□ -1.37
LPCAT4-202ENST00000562404 IGKCP01834 107 aa6.48□□□□□ -1.37
LPCAT4-202ENST00000562404 PLNP26678 52 aa6.48□□□□□ -1.37
LPCAT4-202ENST00000562404 KRTAP4-16G5E9R7 235 aaPredicted RBP6.47□□□□□ -1.37
LPCAT4-202ENST00000562404 EIF4EBP3O60516 100 aaPredicted RBP6.47□□□□□ -1.37
LPCAT4-202ENST00000562404 ATP6V1G1O75348 118 aa6.47□□□□□ -1.37
LPCAT4-202ENST00000562404 SPRR1AP35321 89 aa6.47□□□□□ -1.37
LPCAT4-202ENST00000562404 LOC107984156A0A0G2JMH3 177 aa6.46□□□□□ -1.38
LPCAT4-202ENST00000562404 TRBV10-3A0A0K0K1G6 114 aa6.46□□□□□ -1.38
LPCAT4-202ENST00000562404 FAM229BQ4G0N7 80 aa6.46□□□□□ -1.38
LPCAT4-202ENST00000562404 ARL17AQ8IVW1 177 aa6.46□□□□□ -1.38
LPCAT4-202ENST00000562404 C3orf22Q8N5N4 141 aa6.46□□□□□ -1.38
LPCAT4-202ENST00000562404 HIGD2AQ9BW72 106 aa6.46□□□□□ -1.38
LPCAT4-202ENST00000562404 MAP1LC3CQ9BXW4 147 aa6.46□□□□□ -1.38
LPCAT4-202ENST00000562404 SYS1-DBNDD2H3BUS1 97 aa6.45□□□□□ -1.38
LPCAT4-202ENST00000562404 PRYO14603 147 aa6.45□□□□□ -1.38
LPCAT4-202ENST00000562404 PRR4Q16378 134 aa6.45□□□□□ -1.38
LPCAT4-202ENST00000562404 ADAMTSL4-AS1Q5T5F5 129 aa6.45□□□□□ -1.38
LPCAT4-202ENST00000562404 SOSTDC1Q6X4U4 206 aa6.45□□□□□ -1.38
LPCAT4-202ENST00000562404 KCNQ1DNQ9H478 68 aa6.45□□□□□ -1.38
LPCAT4-202ENST00000562404 IGKV2D-26A0A0A0MRZ7 120 aa6.44□□□□□ -1.38
LPCAT4-202ENST00000562404 LINC00587B1AMM8 73 aa6.44□□□□□ -1.38
LPCAT4-202ENST00000562404 LGALS3P17931 250 aaKnown RBP6.44□□□□□ -1.38
LPCAT4-202ENST00000562404 HERVK_113P61574 105 aa6.44□□□□□ -1.38
LPCAT4-202ENST00000562404 SPRR4Q96PI1 79 aa6.44□□□□□ -1.38
LPCAT4-202ENST00000562404 A0A0J9YXY3 114 aa6.43□□□□□ -1.38
LPCAT4-202ENST00000562404 E9PLD3 99 aa6.43□□□□□ -1.38
LPCAT4-202ENST00000562404 NMUP48645 174 aa6.43□□□□□ -1.38
LPCAT4-202ENST00000562404 NPC2P61916 151 aa6.43□□□□□ -1.38
LPCAT4-202ENST00000562404 LINC00337Q8N6G1 96 aa6.43□□□□□ -1.38
LPCAT4-202ENST00000562404 SMCR5Q8TEV8 140 aa6.43□□□□□ -1.38
LPCAT4-202ENST00000562404 MUC2Q02817 5179 aa6.42□□□□□ -1.38
LPCAT4-202ENST00000562404 LINC01545Q5VT33 79 aa6.42□□□□□ -1.38
LPCAT4-202ENST00000562404 RETNLBQ9BQ08 111 aa6.42□□□□□ -1.38
LPCAT4-202ENST00000562404 C3orf79P0CE67 100 aa6.41□□□□□ -1.38
LPCAT4-202ENST00000562404 LINC00304Q8N9R0 145 aa6.41□□□□□ -1.38
LPCAT4-202ENST00000562404 LITAFQ99732 161 aa6.41□□□□□ -1.38
LPCAT4-202ENST00000562404 TTTY13Q9BZ97 58 aa6.41□□□□□ -1.38
LPCAT4-202ENST00000562404 TRBV10-2A0A0K0K1G8 114 aa6.4□□□□□ -1.38
LPCAT4-202ENST00000562404 B5MCH6 92 aa6.4□□□□□ -1.38
LPCAT4-202ENST00000562404 ERC2-IT1O76042 136 aa6.4□□□□□ -1.38
LPCAT4-202ENST00000562404 DDTP30046 118 aa6.4□□□□□ -1.38
LPCAT4-202ENST00000562404 COA6Q5JTJ3 125 aaKnown RBP6.4□□□□□ -1.38
LPCAT4-202ENST00000562404 MUC17Q685J3 4493 aa6.39□□□□□ -1.39
LPCAT4-202ENST00000562404 ETDCA0A1B0GVM5 59 aa6.39□□□□□ -1.39
LPCAT4-202ENST00000562404 IGLV6-57P01721 117 aa6.39□□□□□ -1.39
LPCAT4-202ENST00000562404 PET117Q6UWS5 81 aa6.39□□□□□ -1.39
LPCAT4-202ENST00000562404 Q9BRP9 147 aa6.39□□□□□ -1.39
LPCAT4-202ENST00000562404 PPDPFQ9H3Y8 114 aa6.39□□□□□ -1.39
LPCAT4-202ENST00000562404 NDUFC2O95298 119 aa6.38□□□□□ -1.39
LPCAT4-202ENST00000562404 SPANXB1Q9NS25 103 aaPredicted RBP6.38□□□□□ -1.39
LPCAT4-202ENST00000562404 MIEN1Q9BRT3 115 aa6.37□□□□□ -1.39
LPCAT4-202ENST00000562404 KRTDAPP60985 99 aa6.36□□□□□ -1.39
LPCAT4-202ENST00000562404 LINC00483Q53H64 154 aa6.36□□□□□ -1.39
LPCAT4-202ENST00000562404 LCE2DQ5TA82 110 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms