RNA–Protein interactions for RNA: ENST00000562373.1

NR4A1-219, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-219ENST00000562373 HSPB8Q9UJY1 196 aa12.6□□□□□ -0.39
NR4A1-219ENST00000562373 IGLV1-50A0A075B6I6 118 aa12.59□□□□□ -0.39
NR4A1-219ENST00000562373 RPL28P46779 137 aaKnown RBP12.59□□□□□ -0.39
NR4A1-219ENST00000562373 RPL24P83731 157 aaKnown RBP12.59□□□□□ -0.39
NR4A1-219ENST00000562373 MEIG1Q5JSS6 88 aa12.59□□□□□ -0.39
NR4A1-219ENST00000562373 TMEM238C9JI98 176 aa12.58□□□□□ -0.4
NR4A1-219ENST00000562373 TSPEAR-AS2P59090 65 aa12.58□□□□□ -0.4
NR4A1-219ENST00000562373 NDUFA12Q9UI09 145 aa12.58□□□□□ -0.4
NR4A1-219ENST00000562373 HIST1H2BKO60814 126 aa12.56□□□□□ -0.4
NR4A1-219ENST00000562373 HIST1H2BJP06899 126 aa12.56□□□□□ -0.4
NR4A1-219ENST00000562373 HIST1H2BOP23527 126 aa12.56□□□□□ -0.4
NR4A1-219ENST00000562373 HIST1H2BBP33778 126 aa12.56□□□□□ -0.4
NR4A1-219ENST00000562373 UBE2AP49459 152 aa12.56□□□□□ -0.4
NR4A1-219ENST00000562373 HIST1H2BDP58876 126 aa12.56□□□□□ -0.4
NR4A1-219ENST00000562373 HIST1H2BCP62807 126 aa12.56□□□□□ -0.4
NR4A1-219ENST00000562373 HIST2H2BEQ16778 126 aa12.56□□□□□ -0.4
NR4A1-219ENST00000562373 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.56□□□□□ -0.4
NR4A1-219ENST00000562373 HIST1H2BHQ93079 126 aa12.56□□□□□ -0.4
NR4A1-219ENST00000562373 HIST1H2BNQ99877 126 aa12.56□□□□□ -0.4
NR4A1-219ENST00000562373 HIST1H2BMQ99879 126 aa12.56□□□□□ -0.4
NR4A1-219ENST00000562373 LEPROTO15243 131 aa12.55□□□□□ -0.4
NR4A1-219ENST00000562373 ATP6V1G1O75348 118 aa12.55□□□□□ -0.4
NR4A1-219ENST00000562373 DPM2O94777 84 aa12.55□□□□□ -0.4
NR4A1-219ENST00000562373 KRTAP13-1Q8IUC0 172 aa12.55□□□□□ -0.4
NR4A1-219ENST00000562373 MIR7-3HGQ8N6C7 128 aa12.55□□□□□ -0.4
NR4A1-219ENST00000562373 ANAPC11Q9NYG5 84 aa12.55□□□□□ -0.4
NR4A1-219ENST00000562373 MYMXA0A1B0GTQ4 84 aa12.53□□□□□ -0.4
NR4A1-219ENST00000562373 IGKCP01834 107 aa12.53□□□□□ -0.4
NR4A1-219ENST00000562373 PLNP26678 52 aa12.53□□□□□ -0.4
NR4A1-219ENST00000562373 HERV-K104P63124 156 aa12.53□□□□□ -0.4
NR4A1-219ENST00000562373 PRLHP81277 87 aa12.53□□□□□ -0.4
NR4A1-219ENST00000562373 FAM19A1Q7Z5A9 133 aa12.53□□□□□ -0.4
NR4A1-219ENST00000562373 TMEM126AQ9H061 195 aa12.53□□□□□ -0.4
NR4A1-219ENST00000562373 UBR4Q5T4S7 5183 aa12.52□□□□□ -0.41
NR4A1-219ENST00000562373 M0R378 163 aa12.52□□□□□ -0.41
NR4A1-219ENST00000562373 MAP1LC3CQ9BXW4 147 aa12.52□□□□□ -0.41
NR4A1-219ENST00000562373 BOD1L2Q8IYS8 172 aa12.51□□□□□ -0.41
NR4A1-219ENST00000562373 PLEKHB2Q96CS7 222 aa12.51□□□□□ -0.41
NR4A1-219ENST00000562373 A0A087X002 238 aa12.5□□□□□ -0.41
NR4A1-219ENST00000562373 J3QQQ9 107 aa12.5□□□□□ -0.41
NR4A1-219ENST00000562373 DAND5Q8N907 189 aa12.5□□□□□ -0.41
NR4A1-219ENST00000562373 NCR3O14931 201 aa12.49□□□□□ -0.41
NR4A1-219ENST00000562373 RPL13AP40429 203 aaKnown RBP12.48□□□□□ -0.41
NR4A1-219ENST00000562373 HERVK_113P61574 105 aa12.48□□□□□ -0.41
NR4A1-219ENST00000562373 LRP2P98164 4655 aa12.46□□□□□ -0.41
NR4A1-219ENST00000562373 LINC00587B1AMM8 73 aa12.46□□□□□ -0.41
NR4A1-219ENST00000562373 SYS1-DBNDD2H3BUS1 97 aa12.46□□□□□ -0.41
NR4A1-219ENST00000562373 LGALS3P17931 250 aaKnown RBP12.46□□□□□ -0.41
NR4A1-219ENST00000562373 CRYGAP11844 174 aa12.43□□□□□ -0.42
NR4A1-219ENST00000562373 TSPAN13O95857 204 aa12.42□□□□□ -0.42
NR4A1-219ENST00000562373 TYMSOSQ8TAI1 123 aa12.42□□□□□ -0.42
NR4A1-219ENST00000562373 KRTAP13-2Q52LG2 175 aa12.41□□□□□ -0.42
NR4A1-219ENST00000562373 HIGD2AQ9BW72 106 aa12.41□□□□□ -0.42
NR4A1-219ENST00000562373 E9PLD3 99 aa12.4□□□□□ -0.42
NR4A1-219ENST00000562373 NMUP48645 174 aa12.4□□□□□ -0.42
NR4A1-219ENST00000562373 TRBV10-3A0A0K0K1G6 114 aa12.39□□□□□ -0.43
NR4A1-219ENST00000562373 NPC2P61916 151 aa12.39□□□□□ -0.43
NR4A1-219ENST00000562373 A0A0J9YXY3 114 aa12.38□□□□□ -0.43
NR4A1-219ENST00000562373 LINC01545Q5VT33 79 aa12.38□□□□□ -0.43
NR4A1-219ENST00000562373 IGKV2D-26A0A0A0MRZ7 120 aa12.37□□□□□ -0.43
NR4A1-219ENST00000562373 C3orf79P0CE67 100 aa12.37□□□□□ -0.43
NR4A1-219ENST00000562373 ADAMTSL4-AS1Q5T5F5 129 aa12.37□□□□□ -0.43
NR4A1-219ENST00000562373 PET117Q6UWS5 81 aa12.37□□□□□ -0.43
NR4A1-219ENST00000562373 LPAP08519 4548 aa12.37□□□□□ -0.43
NR4A1-219ENST00000562373 LOC107984156A0A0G2JMH3 177 aa12.36□□□□□ -0.43
NR4A1-219ENST00000562373 PRYO14603 147 aa12.36□□□□□ -0.43
NR4A1-219ENST00000562373 EIF4EBP3O60516 100 aaPredicted RBP12.36□□□□□ -0.43
NR4A1-219ENST00000562373 ARL17AQ8IVW1 177 aa12.36□□□□□ -0.43
NR4A1-219ENST00000562373 KCNQ1DNQ9H478 68 aa12.36□□□□□ -0.43
NR4A1-219ENST00000562373 SOSTDC1Q6X4U4 206 aa12.35□□□□□ -0.43
NR4A1-219ENST00000562373 KRTDAPP60985 99 aa12.34□□□□□ -0.43
NR4A1-219ENST00000562373 FAM229BQ4G0N7 80 aa12.34□□□□□ -0.43
NR4A1-219ENST00000562373 COA6Q5JTJ3 125 aaKnown RBP12.34□□□□□ -0.43
NR4A1-219ENST00000562373 SPRR1AP35321 89 aa12.33□□□□□ -0.44
NR4A1-219ENST00000562373 PRR4Q16378 134 aa12.33□□□□□ -0.44
NR4A1-219ENST00000562373 TTTY13Q9BZ97 58 aa12.33□□□□□ -0.44
NR4A1-219ENST00000562373 KRTAP4-16G5E9R7 235 aaPredicted RBP12.32□□□□□ -0.44
NR4A1-219ENST00000562373 DDTP30046 118 aa12.32□□□□□ -0.44
NR4A1-219ENST00000562373 MIEN1Q9BRT3 115 aa12.32□□□□□ -0.44
NR4A1-219ENST00000562373 ETDCA0A1B0GVM5 59 aa12.31□□□□□ -0.44
NR4A1-219ENST00000562373 C3orf22Q8N5N4 141 aa12.31□□□□□ -0.44
NR4A1-219ENST00000562373 LINC00337Q8N6G1 96 aa12.31□□□□□ -0.44
NR4A1-219ENST00000562373 SMCR5Q8TEV8 140 aa12.31□□□□□ -0.44
NR4A1-219ENST00000562373 TRBV10-2A0A0K0K1G8 114 aa12.29□□□□□ -0.44
NR4A1-219ENST00000562373 SPRR4Q96PI1 79 aa12.29□□□□□ -0.44
NR4A1-219ENST00000562373 LITAFQ99732 161 aa12.28□□□□□ -0.44
NR4A1-219ENST00000562373 SPANXB1Q9NS25 103 aaPredicted RBP12.28□□□□□ -0.44
NR4A1-219ENST00000562373 PPDPFQ9H3Y8 114 aa12.27□□□□□ -0.45
NR4A1-219ENST00000562373 ZNF815PA8K554 130 aa12.26□□□□□ -0.45
NR4A1-219ENST00000562373 B5MCH6 92 aa12.26□□□□□ -0.45
NR4A1-219ENST00000562373 NDUFC2O95298 119 aa12.26□□□□□ -0.45
NR4A1-219ENST00000562373 S100A7L2Q5SY68 101 aa12.26□□□□□ -0.45
NR4A1-219ENST00000562373 S100A12P80511 92 aa12.25□□□□□ -0.45
NR4A1-219ENST00000562373 ATOH7Q8N100 152 aa12.25□□□□□ -0.45
NR4A1-219ENST00000562373 LINC00304Q8N9R0 145 aa12.25□□□□□ -0.45
NR4A1-219ENST00000562373 ERC2-IT1O76042 136 aa12.24□□□□□ -0.45
NR4A1-219ENST00000562373 IGLV6-57P01721 117 aa12.24□□□□□ -0.45
NR4A1-219ENST00000562373 LINC00308Q8TCZ7 52 aa12.24□□□□□ -0.45
NR4A1-219ENST00000562373 ANKRD39Q53RE8 183 aa12.23□□□□□ -0.45
NR4A1-219ENST00000562373 RETNLBQ9BQ08 111 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms