RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 PRLHP81277 87 aa10.18□□□□□ -0.78
CDC42BPB-208ENST00000561271 RPL24P83731 157 aaKnown RBP10.17□□□□□ -0.78
CDC42BPB-208ENST00000561271 H0Y8G0 127 aa10.16□□□□□ -0.78
CDC42BPB-208ENST00000561271 TRGC2P03986 189 aa10.16□□□□□ -0.78
CDC42BPB-208ENST00000561271 LINC00158P58513 81 aa10.16□□□□□ -0.78
CDC42BPB-208ENST00000561271 TMEM126AQ9H061 195 aa10.16□□□□□ -0.78
CDC42BPB-208ENST00000561271 ANAPC11Q9NYG5 84 aa10.16□□□□□ -0.78
CDC42BPB-208ENST00000561271 CRYGAP11844 174 aa10.15□□□□□ -0.78
CDC42BPB-208ENST00000561271 LINC00310P59036 64 aa10.15□□□□□ -0.78
CDC42BPB-208ENST00000561271 FAM19A1Q7Z5A9 133 aa10.15□□□□□ -0.78
CDC42BPB-208ENST00000561271 SERF1AO75920 110 aa10.14□□□□□ -0.79
CDC42BPB-208ENST00000561271 M0R378 163 aa10.13□□□□□ -0.79
CDC42BPB-208ENST00000561271 TYMSOSQ8TAI1 123 aa10.13□□□□□ -0.79
CDC42BPB-208ENST00000561271 TSPAN13O95857 204 aa10.12□□□□□ -0.79
CDC42BPB-208ENST00000561271 SMIM13P0DJ93 91 aa10.12□□□□□ -0.79
CDC42BPB-208ENST00000561271 PRR4Q16378 134 aa10.12□□□□□ -0.79
CDC42BPB-208ENST00000561271 MEIG1Q5JSS6 88 aa10.12□□□□□ -0.79
CDC42BPB-208ENST00000561271 SLC7A5P1Q8MH63 180 aa10.12□□□□□ -0.79
CDC42BPB-208ENST00000561271 LEPROTL1O95214 131 aa10.11□□□□□ -0.79
CDC42BPB-208ENST00000561271 KRTAP13-2Q52LG2 175 aa10.11□□□□□ -0.79
CDC42BPB-208ENST00000561271 TSPEAR-AS2P59090 65 aa10.09□□□□□ -0.79
CDC42BPB-208ENST00000561271 MIR7-3HGQ8N6C7 128 aa10.09□□□□□ -0.79
CDC42BPB-208ENST00000561271 NDUFA12Q9UI09 145 aa10.09□□□□□ -0.79
CDC42BPB-208ENST00000561271 NCR3O14931 201 aa10.08□□□□□ -0.8
CDC42BPB-208ENST00000561271 ATP6V1G1O75348 118 aa10.08□□□□□ -0.8
CDC42BPB-208ENST00000561271 FAM229BQ4G0N7 80 aa10.08□□□□□ -0.8
CDC42BPB-208ENST00000561271 BOD1L2Q8IYS8 172 aa10.08□□□□□ -0.8
CDC42BPB-208ENST00000561271 HERV-K104P63124 156 aa10.07□□□□□ -0.8
CDC42BPB-208ENST00000561271 FABP4P15090 132 aa10.06□□□□□ -0.8
CDC42BPB-208ENST00000561271 HIGD2AQ9BW72 106 aa10.06□□□□□ -0.8
CDC42BPB-208ENST00000561271 MYMXA0A1B0GTQ4 84 aa10.05□□□□□ -0.8
CDC42BPB-208ENST00000561271 COLCA2A8K830 154 aa10.05□□□□□ -0.8
CDC42BPB-208ENST00000561271 PMCHL2Q9BQD1 86 aa10.05□□□□□ -0.8
CDC42BPB-208ENST00000561271 HSPB8Q9UJY1 196 aa10.05□□□□□ -0.8
CDC42BPB-208ENST00000561271 LEPROTO15243 131 aa10.04□□□□□ -0.8
CDC42BPB-208ENST00000561271 PLNP26678 52 aa10.04□□□□□ -0.8
CDC42BPB-208ENST00000561271 IGKV2D-26A0A0A0MRZ7 120 aa10.03□□□□□ -0.8
CDC42BPB-208ENST00000561271 PRYO14603 147 aa10.03□□□□□ -0.8
CDC42BPB-208ENST00000561271 DAND5Q8N907 189 aa10.03□□□□□ -0.8
CDC42BPB-208ENST00000561271 LINC00304Q8N9R0 145 aa10.03□□□□□ -0.8
CDC42BPB-208ENST00000561271 PLEKHB2Q96CS7 222 aa10.03□□□□□ -0.8
CDC42BPB-208ENST00000561271 DPM2O94777 84 aa10.02□□□□□ -0.81
CDC42BPB-208ENST00000561271 MAP1LC3CQ9BXW4 147 aa10.02□□□□□ -0.81
CDC42BPB-208ENST00000561271 LINC00587B1AMM8 73 aa10.01□□□□□ -0.81
CDC42BPB-208ENST00000561271 J3QQQ9 107 aa10.01□□□□□ -0.81
CDC42BPB-208ENST00000561271 HERVK_113P61574 105 aa10.01□□□□□ -0.81
CDC42BPB-208ENST00000561271 C3orf22Q8N5N4 141 aa10.01□□□□□ -0.81
CDC42BPB-208ENST00000561271 TRBV10-3A0A0K0K1G6 114 aa10□□□□□ -0.81
CDC42BPB-208ENST00000561271 IGKCP01834 107 aa10□□□□□ -0.81
CDC42BPB-208ENST00000561271 RETNLBQ9BQ08 111 aa10□□□□□ -0.81
CDC42BPB-208ENST00000561271 SPRR4Q96PI1 79 aa9.99□□□□□ -0.81
CDC42BPB-208ENST00000561271 LGALS3P17931 250 aaKnown RBP9.98□□□□□ -0.81
CDC42BPB-208ENST00000561271 SPRR1AP35321 89 aa9.98□□□□□ -0.81
CDC42BPB-208ENST00000561271 KCNQ1DNQ9H478 68 aa9.98□□□□□ -0.81
CDC42BPB-208ENST00000561271 LINC00337Q8N6G1 96 aa9.97□□□□□ -0.81
CDC42BPB-208ENST00000561271 ETDCA0A1B0GVM5 59 aa9.96□□□□□ -0.82
CDC42BPB-208ENST00000561271 KRTAP4-16G5E9R7 235 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPB-208ENST00000561271 NMUP48645 174 aa9.96□□□□□ -0.82
CDC42BPB-208ENST00000561271 ZNF706Q9Y5V0 76 aaPredicted RBP9.95□□□□□ -0.82
CDC42BPB-208ENST00000561271 LOC107984156A0A0G2JMH3 177 aa9.94□□□□□ -0.82
CDC42BPB-208ENST00000561271 HIST1H2BKO60814 126 aa9.94□□□□□ -0.82
CDC42BPB-208ENST00000561271 HIST1H2BJP06899 126 aa9.94□□□□□ -0.82
CDC42BPB-208ENST00000561271 HIST1H2BOP23527 126 aa9.94□□□□□ -0.82
CDC42BPB-208ENST00000561271 HIST1H2BBP33778 126 aa9.94□□□□□ -0.82
CDC42BPB-208ENST00000561271 HIST1H2BDP58876 126 aa9.94□□□□□ -0.82
CDC42BPB-208ENST00000561271 HIST1H2BCP62807 126 aa9.94□□□□□ -0.82
CDC42BPB-208ENST00000561271 HIST2H2BEQ16778 126 aa9.94□□□□□ -0.82
CDC42BPB-208ENST00000561271 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.94□□□□□ -0.82
CDC42BPB-208ENST00000561271 ARL17AQ8IVW1 177 aa9.94□□□□□ -0.82
CDC42BPB-208ENST00000561271 HIST1H2BHQ93079 126 aa9.94□□□□□ -0.82
CDC42BPB-208ENST00000561271 HIST1H2BNQ99877 126 aa9.94□□□□□ -0.82
CDC42BPB-208ENST00000561271 HIST1H2BMQ99879 126 aa9.94□□□□□ -0.82
CDC42BPB-208ENST00000561271 MIEN1Q9BRT3 115 aa9.94□□□□□ -0.82
CDC42BPB-208ENST00000561271 DDTP30046 118 aa9.93□□□□□ -0.82
CDC42BPB-208ENST00000561271 SMCR5Q8TEV8 140 aa9.93□□□□□ -0.82
CDC42BPB-208ENST00000561271 NPC2P61916 151 aa9.92□□□□□ -0.82
CDC42BPB-208ENST00000561271 S100A12P80511 92 aa9.92□□□□□ -0.82
CDC42BPB-208ENST00000561271 PPDPFQ9H3Y8 114 aa9.92□□□□□ -0.82
CDC42BPB-208ENST00000561271 SPANXB1Q9NS25 103 aaPredicted RBP9.92□□□□□ -0.82
CDC42BPB-208ENST00000561271 TRBV10-2A0A0K0K1G8 114 aa9.91□□□□□ -0.82
CDC42BPB-208ENST00000561271 SYS1-DBNDD2H3BUS1 97 aa9.91□□□□□ -0.82
CDC42BPB-208ENST00000561271 SOSTDC1Q6X4U4 206 aa9.91□□□□□ -0.82
CDC42BPB-208ENST00000561271 A0A0J9YXY3 114 aa9.9□□□□□ -0.82
CDC42BPB-208ENST00000561271 B5MCH6 92 aa9.9□□□□□ -0.82
CDC42BPB-208ENST00000561271 E9PLD3 99 aa9.9□□□□□ -0.82
CDC42BPB-208ENST00000561271 EIF4EBP3O60516 100 aaPredicted RBP9.89□□□□□ -0.83
CDC42BPB-208ENST00000561271 ADAMTSL4-AS1Q5T5F5 129 aa9.88□□□□□ -0.83
CDC42BPB-208ENST00000561271 ERC2-IT1O76042 136 aa9.87□□□□□ -0.83
CDC42BPB-208ENST00000561271 NDUFC2O95298 119 aa9.87□□□□□ -0.83
CDC42BPB-208ENST00000561271 S100A7L2Q5SY68 101 aa9.87□□□□□ -0.83
CDC42BPB-208ENST00000561271 Q8NBF4 154 aa9.87□□□□□ -0.83
CDC42BPB-208ENST00000561271 MUC2Q02817 5179 aa9.86□□□□□ -0.83
CDC42BPB-208ENST00000561271 IGLV6-57P01721 117 aa9.86□□□□□ -0.83
CDC42BPB-208ENST00000561271 LINC00483Q53H64 154 aa9.86□□□□□ -0.83
CDC42BPB-208ENST00000561271 LINC01545Q5VT33 79 aa9.86□□□□□ -0.83
CDC42BPB-208ENST00000561271 GAGE2AQ6NT46 116 aa9.86□□□□□ -0.83
CDC42BPB-208ENST00000561271 Q6ZRX8 168 aa9.86□□□□□ -0.83
CDC42BPB-208ENST00000561271 Q9BRP9 147 aa9.86□□□□□ -0.83
CDC42BPB-208ENST00000561271 CTAG1AP78358 180 aa9.85□□□□□ -0.83
CDC42BPB-208ENST00000561271 IGLV7-46A0A075B6I9 117 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 226.5 ms