RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 AKR1C3P42330 323 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 RPL39P62891 51 aaKnown RBP1.72□□□□□ -2.13
HERC1-211ENST00000560983 MRPS36P82909 103 aaKnown RBP1.72□□□□□ -2.13
HERC1-211ENST00000560983 SMAGPQ0VAQ4 97 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 C1orf195Q5TG92 126 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 Q6ZVQ6 151 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 Q8IZM0 81 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 TIMM17AQ99595 171 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 TCEAL7Q9BRU2 100 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 TOMM7Q9P0U1 55 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 TNFSF18Q9UNG2 199 aa1.72□□□□□ -2.13
HERC1-211ENST00000560983 A0A0G2JQZ4 141 aa1.71□□□□□ -2.14
HERC1-211ENST00000560983 CCDC160A6NGH7 325 aa1.71□□□□□ -2.14
HERC1-211ENST00000560983 FCER1GP30273 86 aa1.71□□□□□ -2.14
HERC1-211ENST00000560983 SPRR1AP35321 89 aa1.71□□□□□ -2.14
HERC1-211ENST00000560983 HBBP68871 147 aa1.71□□□□□ -2.14
HERC1-211ENST00000560983 SERF2P84101 59 aa1.71□□□□□ -2.14
HERC1-211ENST00000560983 C6orf99Q4VX62 202 aa1.71□□□□□ -2.14
HERC1-211ENST00000560983 CST9LP1Q5W188 147 aa1.71□□□□□ -2.14
HERC1-211ENST00000560983 HRCT1Q6UXD1 115 aa1.71□□□□□ -2.14
HERC1-211ENST00000560983 Q6ZN92 141 aa1.71□□□□□ -2.14
HERC1-211ENST00000560983 STOML3Q8TAV4 291 aa1.71□□□□□ -2.14
HERC1-211ENST00000560983 LIMD2Q9BT23 127 aa1.71□□□□□ -2.14
HERC1-211ENST00000560983 ALKBH7Q9BT30 221 aaPredicted RBP1.71□□□□□ -2.14
HERC1-211ENST00000560983 PSMG3Q9BT73 122 aaPredicted RBP1.71□□□□□ -2.14
HERC1-211ENST00000560983 VCX3AQ9NNX9 186 aa1.71□□□□□ -2.14
HERC1-211ENST00000560983 CTXND1A0A1B0GTU2 59 aa1.7□□□□□ -2.14
HERC1-211ENST00000560983 RAB5BP61020 215 aa1.7□□□□□ -2.14
HERC1-211ENST00000560983 CNPY1Q3B7I2 92 aa1.7□□□□□ -2.14
HERC1-211ENST00000560983 C10orf91Q5T1B1 145 aa1.7□□□□□ -2.14
HERC1-211ENST00000560983 PPP1R1CQ8WVI7 109 aa1.7□□□□□ -2.14
HERC1-211ENST00000560983 Q9H521 79 aa1.7□□□□□ -2.14
HERC1-211ENST00000560983 FAM236DA0A1B0GTK5 79 aa1.69□□□□□ -2.14
HERC1-211ENST00000560983 XKRY2A2RUG3 117 aa1.69□□□□□ -2.14
HERC1-211ENST00000560983 SMKR1H3BMG3 65 aa1.69□□□□□ -2.14
HERC1-211ENST00000560983 PLA2G10O15496 165 aa1.69□□□□□ -2.14
HERC1-211ENST00000560983 MPC2O95563 127 aa1.69□□□□□ -2.14
HERC1-211ENST00000560983 FAM236CP0DP71 79 aa1.69□□□□□ -2.14
HERC1-211ENST00000560983 RAB4AP20338 218 aa1.69□□□□□ -2.14
HERC1-211ENST00000560983 RPL35P42766 123 aaKnown RBP1.69□□□□□ -2.14
HERC1-211ENST00000560983 H2BFSP57053 126 aa1.69□□□□□ -2.14
HERC1-211ENST00000560983 C9orf153Q5TBE3 101 aa1.69□□□□□ -2.14
HERC1-211ENST00000560983 Q5XG85 94 aa1.69□□□□□ -2.14
HERC1-211ENST00000560983 AKAP14Q86UN6 197 aa1.69□□□□□ -2.14
HERC1-211ENST00000560983 SPANXA1Q9NS26 97 aa1.69□□□□□ -2.14
HERC1-211ENST00000560983 FXYD6-FXYD2A0A087WZ82 144 aa1.68□□□□□ -2.14
HERC1-211ENST00000560983 A8MWL6 223 aa1.68□□□□□ -2.14
HERC1-211ENST00000560983 A8MWP4 228 aa1.68□□□□□ -2.14
HERC1-211ENST00000560983 PPP1R2P9O14990 202 aa1.68□□□□□ -2.14
HERC1-211ENST00000560983 HRES1P13985 223 aa1.68□□□□□ -2.14
HERC1-211ENST00000560983 RAB14P61106 215 aa1.68□□□□□ -2.14
HERC1-211ENST00000560983 SMIM15Q7Z3B0 74 aa1.68□□□□□ -2.14
HERC1-211ENST00000560983 Q9BRP9 147 aa1.68□□□□□ -2.14
HERC1-211ENST00000560983 SND1-IT1Q9HBX3 110 aa1.68□□□□□ -2.14
HERC1-211ENST00000560983 NUDT15Q9NV35 164 aa1.68□□□□□ -2.14
HERC1-211ENST00000560983 LOC107984156A0A0G2JMH3 177 aa1.67□□□□□ -2.14
HERC1-211ENST00000560983 SPRR5A0A1B0GTR4 108 aa1.67□□□□□ -2.14
HERC1-211ENST00000560983 CENPXA8MT69 81 aa1.67□□□□□ -2.14
HERC1-211ENST00000560983 H7C2G1 150 aa1.67□□□□□ -2.14
HERC1-211ENST00000560983 CXCL5P42830 114 aa1.67□□□□□ -2.14
HERC1-211ENST00000560983 CENPWQ5EE01 88 aa1.67□□□□□ -2.14
HERC1-211ENST00000560983 ARL17AQ8IVW1 177 aa1.67□□□□□ -2.14
HERC1-211ENST00000560983 KCNQ1DNQ9H478 68 aa1.67□□□□□ -2.14
HERC1-211ENST00000560983 CDKN2A-AS1Q9UH64 79 aa1.67□□□□□ -2.14
HERC1-211ENST00000560983 TRBV20OR9-2A0A075B6H5 130 aa1.66□□□□□ -2.14
HERC1-211ENST00000560983 MAP1LC3B2A6NCE7 125 aa1.66□□□□□ -2.14
HERC1-211ENST00000560983 RAB5AP20339 215 aa1.66□□□□□ -2.14
HERC1-211ENST00000560983 CD164Q04900 197 aa1.66□□□□□ -2.14
HERC1-211ENST00000560983 TRIQKQ629K1 86 aa1.66□□□□□ -2.14
HERC1-211ENST00000560983 AMN1Q8IY45 258 aa1.66□□□□□ -2.14
HERC1-211ENST00000560983 OBSCN-AS1Q96MR7 158 aa1.66□□□□□ -2.14
HERC1-211ENST00000560983 AMELXQ99217 191 aa1.66□□□□□ -2.14
HERC1-211ENST00000560983 MAP1LC3BQ9GZQ8 125 aa1.66□□□□□ -2.14
HERC1-211ENST00000560983 EIF5A2Q9GZV4 153 aaKnown RBP1.66□□□□□ -2.14
HERC1-211ENST00000560983 TMEM191AQ9H0A3 160 aa1.66□□□□□ -2.14
HERC1-211ENST00000560983 TRBV24-1A0A075B6N3 115 aa1.65□□□□□ -2.15
HERC1-211ENST00000560983 TCAPO15273 167 aa1.65□□□□□ -2.15
HERC1-211ENST00000560983 LYRM1O43325 122 aa1.65□□□□□ -2.15
HERC1-211ENST00000560983 IL7P13232 177 aa1.65□□□□□ -2.15
HERC1-211ENST00000560983 PFN2P35080 140 aa1.65□□□□□ -2.15
HERC1-211ENST00000560983 TAGLN2P37802 199 aaKnown RBP1.65□□□□□ -2.15
HERC1-211ENST00000560983 KRTAP19-8Q3LI54 63 aa1.65□□□□□ -2.15
HERC1-211ENST00000560983 C2orf66Q6UXQ4 117 aa1.65□□□□□ -2.15
HERC1-211ENST00000560983 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.15
HERC1-211ENST00000560983 ST20-AS1Q8NBB2 130 aa1.65□□□□□ -2.15
HERC1-211ENST00000560983 COX7B2Q8TF08 81 aa1.65□□□□□ -2.15
HERC1-211ENST00000560983 SMIM12Q96EX1 92 aa1.65□□□□□ -2.15
HERC1-211ENST00000560983 TMEM141Q96I45 108 aa1.65□□□□□ -2.15
HERC1-211ENST00000560983 C20orf78Q9BR46 151 aa1.65□□□□□ -2.15
HERC1-211ENST00000560983 RBM12B-AS1Q9P1G2 102 aa1.65□□□□□ -2.15
HERC1-211ENST00000560983 TRAV9-1A0A075B6T8 112 aa1.64□□□□□ -2.15
HERC1-211ENST00000560983 ETDCA0A1B0GVM5 59 aa1.64□□□□□ -2.15
HERC1-211ENST00000560983 PPP1R17O96001 155 aa1.64□□□□□ -2.15
HERC1-211ENST00000560983 GIPP09681 153 aaPredicted RBP1.64□□□□□ -2.15
HERC1-211ENST00000560983 IFI27P40305 119 aaPredicted RBP1.64□□□□□ -2.15
HERC1-211ENST00000560983 CCL20P78556 96 aa1.64□□□□□ -2.15
HERC1-211ENST00000560983 PDZD11Q5EBL8 140 aa1.64□□□□□ -2.15
HERC1-211ENST00000560983 Q5VV11 94 aa1.64□□□□□ -2.15
HERC1-211ENST00000560983 RPL7L1Q6DKI1 246 aaKnown RBP1.64□□□□□ -2.15
HERC1-211ENST00000560983 ALKAL2Q6UX46 152 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms