RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 Q8NBF4 154 aa10.45□□□□□ -0.74
TRIP4-211ENST00000560920 H3BRM9 83 aa10.44□□□□□ -0.74
TRIP4-211ENST00000560920 LINC01546A6NGU7 62 aa10.43□□□□□ -0.74
TRIP4-211ENST00000560920 COX17Q14061 63 aa10.42□□□□□ -0.74
TRIP4-211ENST00000560920 LCE2CQ5TA81 110 aa10.42□□□□□ -0.74
TRIP4-211ENST00000560920 LINC01549A6NIU2 74 aa10.41□□□□□ -0.74
TRIP4-211ENST00000560920 SPINK1P00995 79 aa10.41□□□□□ -0.74
TRIP4-211ENST00000560920 ZNF625Q96I27 306 aaPredicted RBP10.41□□□□□ -0.74
TRIP4-211ENST00000560920 ZNF706Q9Y5V0 76 aaPredicted RBP10.4□□□□□ -0.74
TRIP4-211ENST00000560920 IGLC3P0DOY3 106 aa10.39□□□□□ -0.75
TRIP4-211ENST00000560920 ZNF22P17026 224 aaPredicted RBP10.37□□□□□ -0.75
TRIP4-211ENST00000560920 SMCR5Q8TEV8 140 aa10.36□□□□□ -0.75
TRIP4-211ENST00000560920 KRTAP19-2Q3LHN2 52 aa10.34□□□□□ -0.75
TRIP4-211ENST00000560920 XP32Q5T750 250 aa10.34□□□□□ -0.75
TRIP4-211ENST00000560920 Q8N377 158 aa10.34□□□□□ -0.75
TRIP4-211ENST00000560920 A0A1B0GVG6 124 aa10.32□□□□□ -0.76
TRIP4-211ENST00000560920 SPRR1AP35321 89 aa10.32□□□□□ -0.76
TRIP4-211ENST00000560920 NDUFA6P56556 154 aa10.32□□□□□ -0.76
TRIP4-211ENST00000560920 LINC00483Q53H64 154 aa10.32□□□□□ -0.76
TRIP4-211ENST00000560920 KRTAP4-16G5E9R7 235 aaPredicted RBP10.31□□□□□ -0.76
TRIP4-211ENST00000560920 PRYO14603 147 aa10.31□□□□□ -0.76
TRIP4-211ENST00000560920 LINC00158P58513 81 aa10.31□□□□□ -0.76
TRIP4-211ENST00000560920 FA2HQ7L5A8 372 aa10.31□□□□□ -0.76
TRIP4-211ENST00000560920 NDUFA12Q9UI09 145 aa10.31□□□□□ -0.76
TRIP4-211ENST00000560920 RPS29P62273 56 aaKnown RBP10.3□□□□□ -0.76
TRIP4-211ENST00000560920 A0A096LNJ9 63 aa10.29□□□□□ -0.76
TRIP4-211ENST00000560920 MT1HP80294 61 aa10.29□□□□□ -0.76
TRIP4-211ENST00000560920 SFTA2Q6UW10 78 aa10.29□□□□□ -0.76
TRIP4-211ENST00000560920 KCNQ1DNQ9H478 68 aa10.29□□□□□ -0.76
TRIP4-211ENST00000560920 SMCO4Q9NRQ5 59 aa10.29□□□□□ -0.76
TRIP4-211ENST00000560920 TRAV9-1A0A075B6T8 112 aa10.28□□□□□ -0.76
TRIP4-211ENST00000560920 A0A0U1RRA0 63 aa10.28□□□□□ -0.76
TRIP4-211ENST00000560920 C11orf86A6NJI1 115 aa10.28□□□□□ -0.76
TRIP4-211ENST00000560920 GAGE2AQ6NT46 116 aa10.28□□□□□ -0.76
TRIP4-211ENST00000560920 FAM19A2Q8N3H0 131 aa10.28□□□□□ -0.76
TRIP4-211ENST00000560920 MOBPQ13875 183 aa10.27□□□□□ -0.77
TRIP4-211ENST00000560920 SSBP3-AS1Q7Z2R9 100 aa10.27□□□□□ -0.77
TRIP4-211ENST00000560920 IGLV9-49A0A0B4J1Y8 123 aa10.26□□□□□ -0.77
TRIP4-211ENST00000560920 SLC25A20O43772 301 aa10.26□□□□□ -0.77
TRIP4-211ENST00000560920 TMEM170BQ5T4T1 132 aa10.26□□□□□ -0.77
TRIP4-211ENST00000560920 ETDCA0A1B0GVM5 59 aa10.25□□□□□ -0.77
TRIP4-211ENST00000560920 NCR3O14931 201 aa10.24□□□□□ -0.77
TRIP4-211ENST00000560920 ERC2-IT1O76042 136 aa10.24□□□□□ -0.77
TRIP4-211ENST00000560920 BOD1L2Q8IYS8 172 aa10.24□□□□□ -0.77
TRIP4-211ENST00000560920 URB1-AS1Q96HZ7 61 aa10.24□□□□□ -0.77
TRIP4-211ENST00000560920 BAGE3Q86Y29 109 aa10.23□□□□□ -0.77
TRIP4-211ENST00000560920 TRBV10-3A0A0K0K1G6 114 aa10.22□□□□□ -0.77
TRIP4-211ENST00000560920 SMIM13P0DJ93 91 aa10.22□□□□□ -0.77
TRIP4-211ENST00000560920 B5MCH6 92 aa10.21□□□□□ -0.77
TRIP4-211ENST00000560920 CFC1BP0CG36 223 aa10.21□□□□□ -0.77
TRIP4-211ENST00000560920 FABP9Q0Z7S8 132 aa10.21□□□□□ -0.77
TRIP4-211ENST00000560920 HBDP02042 147 aa10.19□□□□□ -0.78
TRIP4-211ENST00000560920 LORP23490 312 aaPredicted RBP10.19□□□□□ -0.78
TRIP4-211ENST00000560920 PMCHL1Q16048 86 aa10.19□□□□□ -0.78
TRIP4-211ENST00000560920 MIR7-3HGQ8N6C7 128 aa10.19□□□□□ -0.78
TRIP4-211ENST00000560920 TMEM223A0PJW6 202 aa10.18□□□□□ -0.78
TRIP4-211ENST00000560920 ATP6V1G1O75348 118 aa10.18□□□□□ -0.78
TRIP4-211ENST00000560920 LINC00614P0C842 121 aa10.18□□□□□ -0.78
TRIP4-211ENST00000560920 Q9BRP9 147 aa10.18□□□□□ -0.78
TRIP4-211ENST00000560920 S100PP25815 95 aa10.17□□□□□ -0.78
TRIP4-211ENST00000560920 COX19Q49B96 90 aa10.17□□□□□ -0.78
TRIP4-211ENST00000560920 PCOTHQ58A44 107 aa10.17□□□□□ -0.78
TRIP4-211ENST00000560920 KRTAP10-6P60371 365 aaPredicted RBP10.16□□□□□ -0.78
TRIP4-211ENST00000560920 CHTOPQ9Y3Y2 248 aaKnown RBP10.16□□□□□ -0.78
TRIP4-211ENST00000560920 IGLV8-61A0A075B6I0 122 aa10.15□□□□□ -0.78
TRIP4-211ENST00000560920 MEIG1Q5JSS6 88 aa10.15□□□□□ -0.78
TRIP4-211ENST00000560920 C18orf32Q8TCD1 76 aa10.15□□□□□ -0.78
TRIP4-211ENST00000560920 TMEM218A2RU14 115 aa10.13□□□□□ -0.79
TRIP4-211ENST00000560920 SEC11CQ9BY50 192 aa10.13□□□□□ -0.79
TRIP4-211ENST00000560920 HERV-K104P63124 156 aa10.11□□□□□ -0.79
TRIP4-211ENST00000560920 S100A12P80511 92 aa10.11□□□□□ -0.79
TRIP4-211ENST00000560920 Q6ZRX8 168 aa10.11□□□□□ -0.79
TRIP4-211ENST00000560920 C9orf153Q5TBE3 101 aa10.1□□□□□ -0.79
TRIP4-211ENST00000560920 DDTP30046 118 aa10.09□□□□□ -0.79
TRIP4-211ENST00000560920 LOC107984156A0A0G2JMH3 177 aa10.08□□□□□ -0.8
TRIP4-211ENST00000560920 LINC00587B1AMM8 73 aa10.08□□□□□ -0.8
TRIP4-211ENST00000560920 CLLU1Q5K131 121 aa10.08□□□□□ -0.8
TRIP4-211ENST00000560920 ARL17AQ8IVW1 177 aa10.08□□□□□ -0.8
TRIP4-211ENST00000560920 TRAV12-1A0A0B4J245 112 aa10.07□□□□□ -0.8
TRIP4-211ENST00000560920 C9orf92A6NGG3 77 aa10.07□□□□□ -0.8
TRIP4-211ENST00000560920 UQCC3Q6UW78 93 aa10.07□□□□□ -0.8
TRIP4-211ENST00000560920 TRBV10-2A0A0K0K1G8 114 aa10.06□□□□□ -0.8
TRIP4-211ENST00000560920 TRAPPC1Q9Y5R8 145 aa10.06□□□□□ -0.8
TRIP4-211ENST00000560920 ST20-AS1Q8NBB2 130 aa10.05□□□□□ -0.8
TRIP4-211ENST00000560920 MAP1LC3CQ9BXW4 147 aa10.05□□□□□ -0.8
TRIP4-211ENST00000560920 LOC100996750A0A140TA64 210 aa10.04□□□□□ -0.8
TRIP4-211ENST00000560920 MYMXA0A1B0GTQ4 84 aa10.04□□□□□ -0.8
TRIP4-211ENST00000560920 KRTAP4-6Q9BYQ5 205 aa10.04□□□□□ -0.8
TRIP4-211ENST00000560920 IGLV6-57P01721 117 aa10.03□□□□□ -0.8
TRIP4-211ENST00000560920 IFI27L1Q96BM0 104 aa10.03□□□□□ -0.8
TRIP4-211ENST00000560920 M0R2T5 61 aa10.01□□□□□ -0.81
TRIP4-211ENST00000560920 JOSD1Q15040 202 aaPredicted RBP10.01□□□□□ -0.81
TRIP4-211ENST00000560920 FLGP20930 4061 aaPredicted RBP10□□□□□ -0.81
TRIP4-211ENST00000560920 TSPEAR-AS2P59090 65 aa10□□□□□ -0.81
TRIP4-211ENST00000560920 HRCT1Q6UXD1 115 aa10□□□□□ -0.81
TRIP4-211ENST00000560920 RPS10P5Q9NQ39 176 aa10□□□□□ -0.81
TRIP4-211ENST00000560920 SPANXB1Q9NS25 103 aaPredicted RBP10□□□□□ -0.81
TRIP4-211ENST00000560920 LIMD2Q9BT23 127 aa9.99□□□□□ -0.81
TRIP4-211ENST00000560920 TRAV23DV6A0A075B6W5 121 aa9.98□□□□□ -0.81
TRIP4-211ENST00000560920 S100A7L2Q5SY68 101 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms