RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 C2orf82Q6UX34 121 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 SDIM1Q6ZPB5 146 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 Q6ZRU5 148 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 PCP2Q8IVA1 136 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 BOD1L2Q8IYS8 172 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 LINC00518Q8N0U6 118 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 LINC00526Q96FQ7 95 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 VAMP8Q9BV40 100 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 PPDPFQ9H3Y8 114 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 C6orf48Q9UBA6 75 aa3.52□□□□□ -1.85
ZEB1-220ENST00000560909 LOC107984156A0A0G2JMH3 177 aa3.51□□□□□ -1.85
ZEB1-220ENST00000560909 LINC00587B1AMM8 73 aa3.51□□□□□ -1.85
ZEB1-220ENST00000560909 EPM2AB3EWF7 344 aa3.51□□□□□ -1.85
ZEB1-220ENST00000560909 LGALS3P17931 250 aaKnown RBP3.51□□□□□ -1.85
ZEB1-220ENST00000560909 CKS1BP61024 79 aa3.51□□□□□ -1.85
ZEB1-220ENST00000560909 CIRBPQ14011 172 aaKnown RBP3.51□□□□□ -1.85
ZEB1-220ENST00000560909 ARL17AQ8IVW1 177 aa3.51□□□□□ -1.85
ZEB1-220ENST00000560909 CARD19Q96LW7 228 aa3.51□□□□□ -1.85
ZEB1-220ENST00000560909 CAMK2N2Q96S95 79 aa3.51□□□□□ -1.85
ZEB1-220ENST00000560909 LITAFQ99732 161 aa3.51□□□□□ -1.85
ZEB1-220ENST00000560909 TTTY13Q9BZ97 58 aa3.51□□□□□ -1.85
ZEB1-220ENST00000560909 TOMM7Q9P0U1 55 aa3.51□□□□□ -1.85
ZEB1-220ENST00000560909 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.5□□□□□ -1.85
ZEB1-220ENST00000560909 A0A0J9YXY3 114 aa3.5□□□□□ -1.85
ZEB1-220ENST00000560909 ZNF815PA8K554 130 aa3.5□□□□□ -1.85
ZEB1-220ENST00000560909 NDUFC2-KCTD14E9PQ53 114 aa3.5□□□□□ -1.85
ZEB1-220ENST00000560909 SPATA45Q537H7 98 aa3.5□□□□□ -1.85
ZEB1-220ENST00000560909 Q6ZSA8 131 aa3.5□□□□□ -1.85
ZEB1-220ENST00000560909 HIGD1BQ9P298 99 aa3.5□□□□□ -1.85
ZEB1-220ENST00000560909 ERG28Q9UKR5 140 aa3.5□□□□□ -1.85
ZEB1-220ENST00000560909 PAM16Q9Y3D7 125 aa3.5□□□□□ -1.85
ZEB1-220ENST00000560909 LOC107984640A0A0U1RRK4 108 aa3.49□□□□□ -1.85
ZEB1-220ENST00000560909 GCSHP23434 173 aa3.49□□□□□ -1.85
ZEB1-220ENST00000560909 S100A12P80511 92 aa3.49□□□□□ -1.85
ZEB1-220ENST00000560909 C9orf116Q5BN46 136 aaPredicted RBP3.49□□□□□ -1.85
ZEB1-220ENST00000560909 ADAMTSL4-AS1Q5T5F5 129 aa3.49□□□□□ -1.85
ZEB1-220ENST00000560909 SLC25A34Q6PIV7 304 aa3.49□□□□□ -1.85
ZEB1-220ENST00000560909 Q6ZRP5 223 aa3.49□□□□□ -1.85
ZEB1-220ENST00000560909 Q6ZVH6 145 aa3.49□□□□□ -1.85
ZEB1-220ENST00000560909 C12orf57Q99622 126 aa3.49□□□□□ -1.85
ZEB1-220ENST00000560909 SPANXB1Q9NS25 103 aaPredicted RBP3.49□□□□□ -1.85
ZEB1-220ENST00000560909 RYR1P21817 5038 aa3.48□□□□□ -1.85
ZEB1-220ENST00000560909 FAT1Q14517 4588 aa3.48□□□□□ -1.85
ZEB1-220ENST00000560909 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.48□□□□□ -1.85
ZEB1-220ENST00000560909 IGLV5-52A0A0A0MRZ9 124 aa3.48□□□□□ -1.85
ZEB1-220ENST00000560909 C16orf90A8MZG2 172 aa3.48□□□□□ -1.85
ZEB1-220ENST00000560909 C2orf91Q6ZV80 131 aa3.48□□□□□ -1.85
ZEB1-220ENST00000560909 C14orf144Q96I85 54 aa3.48□□□□□ -1.85
ZEB1-220ENST00000560909 MIEN1Q9BRT3 115 aa3.48□□□□□ -1.85
ZEB1-220ENST00000560909 SPANXDQ9BXN6 97 aa3.48□□□□□ -1.85
ZEB1-220ENST00000560909 SPANXCQ9NY87 97 aa3.48□□□□□ -1.85
ZEB1-220ENST00000560909 PKIGQ9Y2B9 76 aa3.48□□□□□ -1.85
ZEB1-220ENST00000560909 IGLV5-37A0A075B6J1 123 aa3.47□□□□□ -1.85
ZEB1-220ENST00000560909 SMIM13P0DJ93 91 aa3.47□□□□□ -1.85
ZEB1-220ENST00000560909 IFITM1P13164 125 aa3.47□□□□□ -1.85
ZEB1-220ENST00000560909 KRTAP10-1P60331 282 aa3.47□□□□□ -1.85
ZEB1-220ENST00000560909 C9orf129Q5T035 196 aaKnown RBP3.47□□□□□ -1.85
ZEB1-220ENST00000560909 KRTAP7-1Q8IUC3 87 aa3.47□□□□□ -1.85
ZEB1-220ENST00000560909 SND1-IT1Q9HBX3 110 aa3.47□□□□□ -1.85
ZEB1-220ENST00000560909 LINC00474Q9P2X8 69 aa3.47□□□□□ -1.85
ZEB1-220ENST00000560909 UQCR10Q9UDW1 63 aa3.47□□□□□ -1.85
ZEB1-220ENST00000560909 TP73-AS1Q9UF72 201 aa3.47□□□□□ -1.85
ZEB1-220ENST00000560909 HSPG2P98160 4391 aa3.47□□□□□ -1.85
ZEB1-220ENST00000560909 A0A096LNI7 61 aa3.46□□□□□ -1.86
ZEB1-220ENST00000560909 TMEM238C9JI98 176 aa3.46□□□□□ -1.86
ZEB1-220ENST00000560909 PANO1I0J062 215 aa3.46□□□□□ -1.86
ZEB1-220ENST00000560909 FUSP35637 526 aaKnown RBP eCLIP3.46□□□□□ -1.86
ZEB1-220ENST00000560909 LINC00158P58513 81 aa3.46□□□□□ -1.86
ZEB1-220ENST00000560909 TAL2Q16559 108 aa3.46□□□□□ -1.86
ZEB1-220ENST00000560909 MEIG1Q5JSS6 88 aa3.46□□□□□ -1.86
ZEB1-220ENST00000560909 SOSTDC1Q6X4U4 206 aa3.46□□□□□ -1.86
ZEB1-220ENST00000560909 MIR7-3HGQ8N6C7 128 aa3.46□□□□□ -1.86
ZEB1-220ENST00000560909 LINC00308Q8TCZ7 52 aa3.46□□□□□ -1.86
ZEB1-220ENST00000560909 SPACA4Q8TDM5 124 aa3.46□□□□□ -1.86
ZEB1-220ENST00000560909 PLAC8Q9NZF1 115 aa3.46□□□□□ -1.86
ZEB1-220ENST00000560909 KIAA1109Q2LD37 5005 aa3.45□□□□□ -1.86
ZEB1-220ENST00000560909 NDUFC2O95298 119 aa3.45□□□□□ -1.86
ZEB1-220ENST00000560909 VPREB1P12018 145 aa3.45□□□□□ -1.86
ZEB1-220ENST00000560909 PFN2P35080 140 aa3.45□□□□□ -1.86
ZEB1-220ENST00000560909 LINC01620Q4KN68 170 aa3.45□□□□□ -1.86
ZEB1-220ENST00000560909 SCGB1D4Q6XE38 83 aa3.45□□□□□ -1.86
ZEB1-220ENST00000560909 Q8NDZ9 215 aa3.45□□□□□ -1.86
ZEB1-220ENST00000560909 VPS13BQ7Z7G8 4022 aa3.45□□□□□ -1.86
ZEB1-220ENST00000560909 HERC2O95714 4834 aa3.45□□□□□ -1.86
ZEB1-220ENST00000560909 TRBV10-2A0A0K0K1G8 114 aa3.44□□□□□ -1.86
ZEB1-220ENST00000560909 A0A1W2PNN7 141 aa3.44□□□□□ -1.86
ZEB1-220ENST00000560909 CHTF8P0CG12 524 aa3.44□□□□□ -1.86
ZEB1-220ENST00000560909 GAGE2BQ13066 116 aa3.44□□□□□ -1.86
ZEB1-220ENST00000560909 DAND5Q8N907 189 aa3.44□□□□□ -1.86
ZEB1-220ENST00000560909 COPS9Q8WXC6 57 aa3.44□□□□□ -1.86
ZEB1-220ENST00000560909 PRO1933Q9H354 126 aa3.44□□□□□ -1.86
ZEB1-220ENST00000560909 XAGE1AQ9HD64 81 aa3.44□□□□□ -1.86
ZEB1-220ENST00000560909 A0A087WYN8 130 aa3.43□□□□□ -1.86
ZEB1-220ENST00000560909 A0A0U1RRA0 63 aa3.43□□□□□ -1.86
ZEB1-220ENST00000560909 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
ZEB1-220ENST00000560909 TSTD3H0UI37 97 aa3.43□□□□□ -1.86
ZEB1-220ENST00000560909 XGP55808 180 aa3.43□□□□□ -1.86
ZEB1-220ENST00000560909 RPL18AQ02543 176 aaKnown RBP3.43□□□□□ -1.86
ZEB1-220ENST00000560909 HSD52Q0P140 79 aa3.43□□□□□ -1.86
ZEB1-220ENST00000560909 GAGE2EQ4V326 116 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms