RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 FAM19A5Q7Z5A7 132 aaPredicted RBP5.56□□□□□ -1.52
HERC1-210ENST00000560897 MAP1LC3CQ9BXW4 147 aa5.56□□□□□ -1.52
HERC1-210ENST00000560897 GEMIN7Q9H840 131 aaKnown RBP5.56□□□□□ -1.52
HERC1-210ENST00000560897 LINC00959A0A1B0GUT2 108 aa5.55□□□□□ -1.52
HERC1-210ENST00000560897 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
HERC1-210ENST00000560897 PMVKQ15126 192 aa5.55□□□□□ -1.52
HERC1-210ENST00000560897 IFI27L1Q96BM0 104 aa5.55□□□□□ -1.52
HERC1-210ENST00000560897 OPRPNQ99935 248 aaPredicted RBP5.55□□□□□ -1.52
HERC1-210ENST00000560897 CHTOPQ9Y3Y2 248 aaKnown RBP5.55□□□□□ -1.52
HERC1-210ENST00000560897 IGLV4-3A0A075B6K6 122 aa5.54□□□□□ -1.52
HERC1-210ENST00000560897 A0A087X002 238 aa5.54□□□□□ -1.52
HERC1-210ENST00000560897 IGIPA6NJ69 53 aa5.54□□□□□ -1.52
HERC1-210ENST00000560897 ZNF861PO60384 105 aa5.54□□□□□ -1.52
HERC1-210ENST00000560897 RNF151Q2KHN1 245 aa5.54□□□□□ -1.52
HERC1-210ENST00000560897 PDZD11Q5EBL8 140 aa5.54□□□□□ -1.52
HERC1-210ENST00000560897 Q6ZUT4 128 aa5.54□□□□□ -1.52
HERC1-210ENST00000560897 KRTAP11-1Q8IUC1 163 aa5.54□□□□□ -1.52
HERC1-210ENST00000560897 LINC00304Q8N9R0 145 aa5.54□□□□□ -1.52
HERC1-210ENST00000560897 H3BRM9 83 aa5.53□□□□□ -1.52
HERC1-210ENST00000560897 M0QXV9 152 aa5.53□□□□□ -1.52
HERC1-210ENST00000560897 COX7A2LO14548 114 aa5.53□□□□□ -1.52
HERC1-210ENST00000560897 CD164L2Q6UWJ8 174 aa5.53□□□□□ -1.52
HERC1-210ENST00000560897 URB1-AS1Q96HZ7 61 aa5.53□□□□□ -1.52
HERC1-210ENST00000560897 CST9LQ9H4G1 147 aa5.53□□□□□ -1.52
HERC1-210ENST00000560897 FAM168BA1KXE4 195 aa5.52□□□□□ -1.53
HERC1-210ENST00000560897 C20orf202A1L168 122 aa5.52□□□□□ -1.53
HERC1-210ENST00000560897 HERVK_113P63121 156 aa5.52□□□□□ -1.53
HERC1-210ENST00000560897 C2orf48Q96LS8 159 aa5.52□□□□□ -1.53
HERC1-210ENST00000560897 PRYO14603 147 aa5.51□□□□□ -1.53
HERC1-210ENST00000560897 NUPR1O60356 82 aa5.51□□□□□ -1.53
HERC1-210ENST00000560897 PRSS2P07478 247 aa5.51□□□□□ -1.53
HERC1-210ENST00000560897 C5orf38Q86SI9 138 aa5.51□□□□□ -1.53
HERC1-210ENST00000560897 AMELXQ99217 191 aa5.51□□□□□ -1.53
HERC1-210ENST00000560897 KRTDAPP60985 99 aa5.5□□□□□ -1.53
HERC1-210ENST00000560897 TMEM170BQ5T4T1 132 aa5.5□□□□□ -1.53
HERC1-210ENST00000560897 ZC2HC1BQ5TFG8 222 aa5.5□□□□□ -1.53
HERC1-210ENST00000560897 KRTAP4-1Q9BYQ7 146 aa5.5□□□□□ -1.53
HERC1-210ENST00000560897 TRAV12-1A0A0B4J245 112 aa5.49□□□□□ -1.53
HERC1-210ENST00000560897 TINCRA0A1B0GVN0 87 aa5.49□□□□□ -1.53
HERC1-210ENST00000560897 M0R143 59 aa5.49□□□□□ -1.53
HERC1-210ENST00000560897 LINC00310P59036 64 aa5.49□□□□□ -1.53
HERC1-210ENST00000560897 GAGE2EQ4V326 116 aa5.49□□□□□ -1.53
HERC1-210ENST00000560897 LINC00242Q5T6M2 205 aa5.49□□□□□ -1.53
HERC1-210ENST00000560897 KRTAP4-12Q9BQ66 201 aa5.49□□□□□ -1.53
HERC1-210ENST00000560897 GAGE2DQ9UEU5 116 aa5.49□□□□□ -1.53
HERC1-210ENST00000560897 A0A096LNJ9 63 aa5.48□□□□□ -1.53
HERC1-210ENST00000560897 A0A1B0GV90 55 aa5.48□□□□□ -1.53
HERC1-210ENST00000560897 C9orf118A6NHY6 69 aa5.48□□□□□ -1.53
HERC1-210ENST00000560897 F8VRH5 84 aa5.48□□□□□ -1.53
HERC1-210ENST00000560897 PLNP26678 52 aa5.48□□□□□ -1.53
HERC1-210ENST00000560897 RPL28P46779 137 aaKnown RBP5.48□□□□□ -1.53
HERC1-210ENST00000560897 CKS1BP61024 79 aa5.48□□□□□ -1.53
HERC1-210ENST00000560897 HERVK_113P61574 105 aa5.48□□□□□ -1.53
HERC1-210ENST00000560897 MT1HP80294 61 aa5.48□□□□□ -1.53
HERC1-210ENST00000560897 SPAG11BQ08648 103 aa5.48□□□□□ -1.53
HERC1-210ENST00000560897 C6orf226Q5I0X4 101 aa5.48□□□□□ -1.53
HERC1-210ENST00000560897 MIEN1Q9BRT3 115 aa5.48□□□□□ -1.53
HERC1-210ENST00000560897 PRO1933Q9H354 126 aa5.48□□□□□ -1.53
HERC1-210ENST00000560897 TOMM7Q9P0U1 55 aa5.48□□□□□ -1.53
HERC1-210ENST00000560897 A0A0A0MQY5 61 aa5.47□□□□□ -1.53
HERC1-210ENST00000560897 SYS1-DBNDD2H3BUS1 97 aa5.47□□□□□ -1.53
HERC1-210ENST00000560897 DPM2O94777 84 aa5.47□□□□□ -1.53
HERC1-210ENST00000560897 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
HERC1-210ENST00000560897 FP248Q71RG6 208 aaPredicted RBP5.47□□□□□ -1.53
HERC1-210ENST00000560897 ORAOV1Q8WV07 137 aa5.47□□□□□ -1.53
HERC1-210ENST00000560897 SNHG12Q9BXW3 62 aa5.47□□□□□ -1.53
HERC1-210ENST00000560897 HSBP1L1C9JCN9 74 aa5.46□□□□□ -1.54
HERC1-210ENST00000560897 M0R2T5 61 aa5.46□□□□□ -1.54
HERC1-210ENST00000560897 IGKCP01834 107 aa5.46□□□□□ -1.54
HERC1-210ENST00000560897 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.54
HERC1-210ENST00000560897 LINC01561Q8N1V8 128 aa5.46□□□□□ -1.54
HERC1-210ENST00000560897 VAMP8Q9BV40 100 aa5.46□□□□□ -1.54
HERC1-210ENST00000560897 MRPL35Q9NZE8 188 aaKnown RBP5.46□□□□□ -1.54
HERC1-210ENST00000560897 CDKN2A-AS1Q9UH64 79 aa5.46□□□□□ -1.54
HERC1-210ENST00000560897 IGKV2D-26A0A0A0MRZ7 120 aa5.45□□□□□ -1.54
HERC1-210ENST00000560897 IGHV3OR16-9A0A0B4J2B5 98 aa5.45□□□□□ -1.54
HERC1-210ENST00000560897 NDUFA1O15239 70 aa5.45□□□□□ -1.54
HERC1-210ENST00000560897 C3orf79P0CE67 100 aa5.45□□□□□ -1.54
HERC1-210ENST00000560897 IGLC3P0DOY3 106 aa5.45□□□□□ -1.54
HERC1-210ENST00000560897 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
HERC1-210ENST00000560897 FAM19A3Q7Z5A8 133 aa5.45□□□□□ -1.54
HERC1-210ENST00000560897 PMCHL2Q9BQD1 86 aa5.45□□□□□ -1.54
HERC1-210ENST00000560897 SPINK8P0C7L1 97 aa5.44□□□□□ -1.54
HERC1-210ENST00000560897 TLX1NBP0CAT3 122 aa5.44□□□□□ -1.54
HERC1-210ENST00000560897 KRTAP13-2Q52LG2 175 aa5.44□□□□□ -1.54
HERC1-210ENST00000560897 FAM104AQ969W3 186 aa5.44□□□□□ -1.54
HERC1-210ENST00000560897 ANAPC11Q9NYG5 84 aa5.44□□□□□ -1.54
HERC1-210ENST00000560897 C11orf86A6NJI1 115 aa5.43□□□□□ -1.54
HERC1-210ENST00000560897 KRTAP13-3Q3SY46 172 aa5.43□□□□□ -1.54
HERC1-210ENST00000560897 COX7B2Q8TF08 81 aa5.43□□□□□ -1.54
HERC1-210ENST00000560897 UQCR10Q9UDW1 63 aa5.43□□□□□ -1.54
HERC1-210ENST00000560897 ZNF22P17026 224 aaPredicted RBP5.42□□□□□ -1.54
HERC1-210ENST00000560897 LGALS3P17931 250 aaKnown RBP5.42□□□□□ -1.54
HERC1-210ENST00000560897 CXCL5P42830 114 aa5.42□□□□□ -1.54
HERC1-210ENST00000560897 FAM229BQ4G0N7 80 aa5.42□□□□□ -1.54
HERC1-210ENST00000560897 SFTA2Q6UW10 78 aa5.42□□□□□ -1.54
HERC1-210ENST00000560897 Q8IZM0 81 aa5.42□□□□□ -1.54
HERC1-210ENST00000560897 PLEKHB2Q96CS7 222 aa5.42□□□□□ -1.54
HERC1-210ENST00000560897 IGLV5-45A0A087WSX0 123 aa5.41□□□□□ -1.54
HERC1-210ENST00000560897 DLEU1O43261 78 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms