RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 TRBV30A0A0K0K1B3 111 aa8.96□□□□□ -0.98
PKNOX1-209ENST00000560448 LOC107984640A0A0U1RRK4 108 aa8.96□□□□□ -0.98
PKNOX1-209ENST00000560448 TMEM238LA0A1B0GVL6 79 aa8.96□□□□□ -0.98
PKNOX1-209ENST00000560448 A6NJY4 79 aa8.96□□□□□ -0.98
PKNOX1-209ENST00000560448 KIAA0087Q14695 138 aa8.96□□□□□ -0.98
PKNOX1-209ENST00000560448 Q6ZRU5 148 aa8.96□□□□□ -0.98
PKNOX1-209ENST00000560448 SCXQ7RTU7 201 aa8.96□□□□□ -0.98
PKNOX1-209ENST00000560448 COX7B2Q8TF08 81 aa8.96□□□□□ -0.98
PKNOX1-209ENST00000560448 LINC00526Q96FQ7 95 aa8.96□□□□□ -0.98
PKNOX1-209ENST00000560448 HSPG2P98160 4391 aa8.95□□□□□ -0.98
PKNOX1-209ENST00000560448 HERV-K104P63124 156 aa8.95□□□□□ -0.98
PKNOX1-209ENST00000560448 MUSTN1Q8IVN3 82 aa8.95□□□□□ -0.98
PKNOX1-209ENST00000560448 SPACA4Q8TDM5 124 aa8.95□□□□□ -0.98
PKNOX1-209ENST00000560448 KRTAP17-1Q9BYP8 105 aa8.95□□□□□ -0.98
PKNOX1-209ENST00000560448 H3BUT2 72 aa8.94□□□□□ -0.98
PKNOX1-209ENST00000560448 TLX1NBP0CAT3 122 aa8.94□□□□□ -0.98
PKNOX1-209ENST00000560448 CKS1BP61024 79 aa8.94□□□□□ -0.98
PKNOX1-209ENST00000560448 C6orf226Q5I0X4 101 aa8.94□□□□□ -0.98
PKNOX1-209ENST00000560448 CIRBP-AS1Q8TBR5 109 aa8.94□□□□□ -0.98
PKNOX1-209ENST00000560448 DNAH8Q96JB1 4490 aa8.93□□□□□ -0.98
PKNOX1-209ENST00000560448 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
PKNOX1-209ENST00000560448 EIF4EBP3O60516 100 aaPredicted RBP8.93□□□□□ -0.98
PKNOX1-209ENST00000560448 CFC1BP0CG36 223 aa8.93□□□□□ -0.98
PKNOX1-209ENST00000560448 CFC1P0CG37 223 aa8.93□□□□□ -0.98
PKNOX1-209ENST00000560448 SFTA2Q6UW10 78 aa8.93□□□□□ -0.98
PKNOX1-209ENST00000560448 NAA38Q9BRA0 125 aaKnown RBP8.93□□□□□ -0.98
PKNOX1-209ENST00000560448 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.93□□□□□ -0.98
PKNOX1-209ENST00000560448 A4D1N5 150 aa8.92□□□□□ -0.98
PKNOX1-209ENST00000560448 RPL24P83731 157 aaKnown RBP8.92□□□□□ -0.98
PKNOX1-209ENST00000560448 A0A1W2PPM0 123 aa8.91□□□□□ -0.98
PKNOX1-209ENST00000560448 EPM2AB3EWF7 344 aa8.91□□□□□ -0.98
PKNOX1-209ENST00000560448 IFITM1P13164 125 aa8.91□□□□□ -0.98
PKNOX1-209ENST00000560448 UBE2V1Q13404 147 aa8.91□□□□□ -0.98
PKNOX1-209ENST00000560448 VAMP3Q15836 100 aa8.91□□□□□ -0.98
PKNOX1-209ENST00000560448 DPH3Q96FX2 82 aa8.91□□□□□ -0.98
PKNOX1-209ENST00000560448 TOMM7Q9P0U1 55 aa8.91□□□□□ -0.98
PKNOX1-209ENST00000560448 PCLOQ9Y6V0 5065 aa8.91□□□□□ -0.98
PKNOX1-209ENST00000560448 A0A096LNI7 61 aa8.9□□□□□ -0.98
PKNOX1-209ENST00000560448 UNQ6190/PRO20217Q6UXQ8 127 aa8.9□□□□□ -0.98
PKNOX1-209ENST00000560448 PLAC8Q9NZF1 115 aa8.9□□□□□ -0.98
PKNOX1-209ENST00000560448 C6orf48Q9UBA6 75 aa8.89□□□□□ -0.99
PKNOX1-209ENST00000560448 A0A087WYN8 130 aa8.88□□□□□ -0.99
PKNOX1-209ENST00000560448 A0A0B4J2C4 111 aa8.88□□□□□ -0.99
PKNOX1-209ENST00000560448 IGKV2-24A0A0C4DH68 120 aa8.88□□□□□ -0.99
PKNOX1-209ENST00000560448 NDUFC2-KCTD14E9PQ53 114 aa8.88□□□□□ -0.99
PKNOX1-209ENST00000560448 PLA2G1BP04054 148 aaKnown RBP8.88□□□□□ -0.99
PKNOX1-209ENST00000560448 DAND5Q8N907 189 aa8.88□□□□□ -0.99
PKNOX1-209ENST00000560448 PPDPFQ9H3Y8 114 aa8.88□□□□□ -0.99
PKNOX1-209ENST00000560448 CHTF8P0CG12 524 aa8.88□□□□□ -0.99
PKNOX1-209ENST00000560448 RPL18AQ02543 176 aaKnown RBP8.88□□□□□ -0.99
PKNOX1-209ENST00000560448 MEIG1Q5JSS6 88 aa8.88□□□□□ -0.99
PKNOX1-209ENST00000560448 C10orf25Q5T742 122 aa8.88□□□□□ -0.99
PKNOX1-209ENST00000560448 Q5VSD8 79 aa8.88□□□□□ -0.99
PKNOX1-209ENST00000560448 C2orf82Q6UX34 121 aa8.88□□□□□ -0.99
PKNOX1-209ENST00000560448 LINC00308Q8TCZ7 52 aa8.88□□□□□ -0.99
PKNOX1-209ENST00000560448 PANO1I0J062 215 aa8.87□□□□□ -0.99
PKNOX1-209ENST00000560448 K7EP34 96 aa8.87□□□□□ -0.99
PKNOX1-209ENST00000560448 TSPAN13O95857 204 aa8.87□□□□□ -0.99
PKNOX1-209ENST00000560448 HAMPP81172 84 aa8.87□□□□□ -0.99
PKNOX1-209ENST00000560448 GAGE2BQ13066 116 aa8.87□□□□□ -0.99
PKNOX1-209ENST00000560448 SOSTDC1Q6X4U4 206 aa8.87□□□□□ -0.99
PKNOX1-209ENST00000560448 LINC00528Q8N1L1 170 aa8.87□□□□□ -0.99
PKNOX1-209ENST00000560448 PRO1854Q9UHT4 67 aa8.87□□□□□ -0.99
PKNOX1-209ENST00000560448 SMR3BP02814 79 aaPredicted RBP8.86□□□□□ -0.99
PKNOX1-209ENST00000560448 FABP2P12104 132 aa8.86□□□□□ -0.99
PKNOX1-209ENST00000560448 A0A0U1RRA0 63 aa8.85□□□□□ -0.99
PKNOX1-209ENST00000560448 GAGE10A6NGK3 116 aa8.85□□□□□ -0.99
PKNOX1-209ENST00000560448 NPC2P61916 151 aa8.85□□□□□ -0.99
PKNOX1-209ENST00000560448 Q6ZRP5 223 aa8.85□□□□□ -0.99
PKNOX1-209ENST00000560448 C7orf33Q8WU49 177 aa8.85□□□□□ -0.99
PKNOX1-209ENST00000560448 SPCS1Q9Y6A9 102 aa8.84□□□□□ -0.99
PKNOX1-209ENST00000560448 COX17Q14061 63 aa8.83□□□□□ -1
PKNOX1-209ENST00000560448 GTF2H5Q6ZYL4 71 aa8.83□□□□□ -1
PKNOX1-209ENST00000560448 COPS9Q8WXC6 57 aa8.83□□□□□ -1
PKNOX1-209ENST00000560448 ERG28Q9UKR5 140 aa8.83□□□□□ -1
PKNOX1-209ENST00000560448 MIR7-3HGQ8N6C7 128 aa8.82□□□□□ -1
PKNOX1-209ENST00000560448 LINC00158P58513 81 aa8.81□□□□□ -1
PKNOX1-209ENST00000560448 C9orf116Q5BN46 136 aaPredicted RBP8.8□□□□□ -1
PKNOX1-209ENST00000560448 RPL37AP61513 92 aaKnown RBP8.8□□□□□ -1
PKNOX1-209ENST00000560448 GAGE2EQ4V326 116 aa8.8□□□□□ -1
PKNOX1-209ENST00000560448 GAGE2DQ9UEU5 116 aa8.8□□□□□ -1
PKNOX1-209ENST00000560448 ABCA13Q86UQ4 5058 aa8.79□□□□□ -1
PKNOX1-209ENST00000560448 LOC107984156A0A0G2JMH3 177 aa8.79□□□□□ -1
PKNOX1-209ENST00000560448 PFN2P35080 140 aa8.79□□□□□ -1
PKNOX1-209ENST00000560448 ARL17AQ8IVW1 177 aa8.79□□□□□ -1
PKNOX1-209ENST00000560448 FAT1Q14517 4588 aa8.77□□□□□ -1.01
PKNOX1-209ENST00000560448 KRTAP4-5Q9BYR2 181 aa8.77□□□□□ -1.01
PKNOX1-209ENST00000560448 A0A1W2PNN7 141 aa8.76□□□□□ -1.01
PKNOX1-209ENST00000560448 C9orf129Q5T035 196 aaKnown RBP8.76□□□□□ -1.01
PKNOX1-209ENST00000560448 PLA2G2DQ9UNK4 145 aa8.76□□□□□ -1.01
PKNOX1-209ENST00000560448 H7C2G1 150 aa8.75□□□□□ -1.01
PKNOX1-209ENST00000560448 RPL13AP40429 203 aaKnown RBP8.75□□□□□ -1.01
PKNOX1-209ENST00000560448 LYRM7Q5U5X0 104 aa8.75□□□□□ -1.01
PKNOX1-209ENST00000560448 SND1-IT1Q9HBX3 110 aa8.75□□□□□ -1.01
PKNOX1-209ENST00000560448 IGKV2-28A0A075B6P5 120 aa8.74□□□□□ -1.01
PKNOX1-209ENST00000560448 IGKV2D-28P01615 120 aa8.74□□□□□ -1.01
PKNOX1-209ENST00000560448 INAFM2P0DMQ5 153 aa8.74□□□□□ -1.01
PKNOX1-209ENST00000560448 KRTAP10-4P60372 401 aaPredicted RBP8.74□□□□□ -1.01
PKNOX1-209ENST00000560448 H3BMG7 143 aa8.73□□□□□ -1.01
PKNOX1-209ENST00000560448 TRIAP1O43715 76 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms