RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 HIST1H2BDP58876 126 aa9.17□□□□□ -0.94
SNRPA1-210ENST00000560383 HIST1H2BCP62807 126 aa9.17□□□□□ -0.94
SNRPA1-210ENST00000560383 HIST2H2BEQ16778 126 aa9.17□□□□□ -0.94
SNRPA1-210ENST00000560383 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.17□□□□□ -0.94
SNRPA1-210ENST00000560383 HIST1H2BHQ93079 126 aa9.17□□□□□ -0.94
SNRPA1-210ENST00000560383 LINC00167Q96N53 147 aa9.17□□□□□ -0.94
SNRPA1-210ENST00000560383 HIST1H2BNQ99877 126 aa9.17□□□□□ -0.94
SNRPA1-210ENST00000560383 HIST1H2BMQ99879 126 aa9.17□□□□□ -0.94
SNRPA1-210ENST00000560383 SND1-IT1Q9HBX3 110 aa9.17□□□□□ -0.94
SNRPA1-210ENST00000560383 ZNF861PO60384 105 aa9.16□□□□□ -0.94
SNRPA1-210ENST00000560383 HSPB8Q9UJY1 196 aa9.16□□□□□ -0.94
SNRPA1-210ENST00000560383 BCE1O60756 84 aa9.14□□□□□ -0.95
SNRPA1-210ENST00000560383 KRTAP1-4P0C5Y4 121 aa9.14□□□□□ -0.95
SNRPA1-210ENST00000560383 VPREB1P12018 145 aa9.14□□□□□ -0.95
SNRPA1-210ENST00000560383 NKAPP1Q8N9T2 125 aa9.13□□□□□ -0.95
SNRPA1-210ENST00000560383 RPL37AP8A6NKH3 93 aa9.12□□□□□ -0.95
SNRPA1-210ENST00000560383 H0Y8G0 127 aa9.12□□□□□ -0.95
SNRPA1-210ENST00000560383 FABP4P15090 132 aa9.12□□□□□ -0.95
SNRPA1-210ENST00000560383 PLNP26678 52 aa9.12□□□□□ -0.95
SNRPA1-210ENST00000560383 GAGE10A6NGK3 116 aa9.11□□□□□ -0.95
SNRPA1-210ENST00000560383 HERV-K104P63124 156 aa9.11□□□□□ -0.95
SNRPA1-210ENST00000560383 RPL24P83731 157 aaKnown RBP9.11□□□□□ -0.95
SNRPA1-210ENST00000560383 IGLV1-50A0A075B6I6 118 aa9.1□□□□□ -0.95
SNRPA1-210ENST00000560383 DPM2O94777 84 aa9.1□□□□□ -0.95
SNRPA1-210ENST00000560383 LINC00158P58513 81 aa9.1□□□□□ -0.95
SNRPA1-210ENST00000560383 PRR26Q8N8Z3 221 aa9.1□□□□□ -0.95
SNRPA1-210ENST00000560383 Q8NDZ9 215 aa9.1□□□□□ -0.95
SNRPA1-210ENST00000560383 NDUFA12Q9UI09 145 aa9.1□□□□□ -0.95
SNRPA1-210ENST00000560383 RPL28P46779 137 aaKnown RBP9.09□□□□□ -0.95
SNRPA1-210ENST00000560383 KRTAP13-1Q8IUC0 172 aa9.09□□□□□ -0.95
SNRPA1-210ENST00000560383 LINC00587B1AMM8 73 aa9.08□□□□□ -0.96
SNRPA1-210ENST00000560383 LEPROTO15243 131 aa9.08□□□□□ -0.96
SNRPA1-210ENST00000560383 SMIM13P0DJ93 91 aa9.08□□□□□ -0.96
SNRPA1-210ENST00000560383 TSPEAR-AS2P59090 65 aa9.08□□□□□ -0.96
SNRPA1-210ENST00000560383 MAP1LC3CQ9BXW4 147 aa9.08□□□□□ -0.96
SNRPA1-210ENST00000560383 MYMXA0A1B0GTQ4 84 aa9.07□□□□□ -0.96
SNRPA1-210ENST00000560383 IGKCP01834 107 aa9.07□□□□□ -0.96
SNRPA1-210ENST00000560383 COA6Q5JTJ3 125 aaKnown RBP9.07□□□□□ -0.96
SNRPA1-210ENST00000560383 PLEKHB2Q96CS7 222 aa9.07□□□□□ -0.96
SNRPA1-210ENST00000560383 IGKV2-28A0A075B6P5 120 aa9.06□□□□□ -0.96
SNRPA1-210ENST00000560383 A0A0U1RRA0 63 aa9.06□□□□□ -0.96
SNRPA1-210ENST00000560383 IGKV2D-28P01615 120 aa9.06□□□□□ -0.96
SNRPA1-210ENST00000560383 PMCHL2Q9BQD1 86 aa9.06□□□□□ -0.96
SNRPA1-210ENST00000560383 J3QQQ9 107 aa9.05□□□□□ -0.96
SNRPA1-210ENST00000560383 HERVK_113P61574 105 aa9.05□□□□□ -0.96
SNRPA1-210ENST00000560383 MEIG1Q5JSS6 88 aa9.05□□□□□ -0.96
SNRPA1-210ENST00000560383 MIR7-3HGQ8N6C7 128 aa9.05□□□□□ -0.96
SNRPA1-210ENST00000560383 TMEM126AQ9H061 195 aa9.05□□□□□ -0.96
SNRPA1-210ENST00000560383 RPL13AP40429 203 aaKnown RBP9.04□□□□□ -0.96
SNRPA1-210ENST00000560383 NMUP48645 174 aa9.04□□□□□ -0.96
SNRPA1-210ENST00000560383 LPAP08519 4548 aa9.04□□□□□ -0.96
SNRPA1-210ENST00000560383 LOC107984156A0A0G2JMH3 177 aa9.03□□□□□ -0.96
SNRPA1-210ENST00000560383 SYS1-DBNDD2H3BUS1 97 aa9.03□□□□□ -0.96
SNRPA1-210ENST00000560383 M0R378 163 aa9.03□□□□□ -0.96
SNRPA1-210ENST00000560383 ARL17AQ8IVW1 177 aa9.03□□□□□ -0.96
SNRPA1-210ENST00000560383 TMEM238C9JI98 176 aa9.02□□□□□ -0.97
SNRPA1-210ENST00000560383 UBE2AP49459 152 aa9.02□□□□□ -0.97
SNRPA1-210ENST00000560383 IGKV2D-26A0A0A0MRZ7 120 aa9.01□□□□□ -0.97
SNRPA1-210ENST00000560383 E9PLD3 99 aa9.01□□□□□ -0.97
SNRPA1-210ENST00000560383 LINC01545Q5VT33 79 aa9.01□□□□□ -0.97
SNRPA1-210ENST00000560383 BOD1L2Q8IYS8 172 aa9.01□□□□□ -0.97
SNRPA1-210ENST00000560383 S100A6P06703 90 aa9□□□□□ -0.97
SNRPA1-210ENST00000560383 PET117Q6UWS5 81 aa9□□□□□ -0.97
SNRPA1-210ENST00000560383 LGALS3P17931 250 aaKnown RBP8.99□□□□□ -0.97
SNRPA1-210ENST00000560383 PRLHP81277 87 aa8.99□□□□□ -0.97
SNRPA1-210ENST00000560383 FAM19A1Q7Z5A9 133 aa8.99□□□□□ -0.97
SNRPA1-210ENST00000560383 A0A087X002 238 aa8.97□□□□□ -0.97
SNRPA1-210ENST00000560383 DAND5Q8N907 189 aa8.97□□□□□ -0.97
SNRPA1-210ENST00000560383 KCNQ1DNQ9H478 68 aa8.97□□□□□ -0.97
SNRPA1-210ENST00000560383 PRYO14603 147 aa8.96□□□□□ -0.98
SNRPA1-210ENST00000560383 C3orf79P0CE67 100 aa8.96□□□□□ -0.98
SNRPA1-210ENST00000560383 CRYGAP11844 174 aa8.96□□□□□ -0.98
SNRPA1-210ENST00000560383 S100A2P29034 98 aa8.96□□□□□ -0.98
SNRPA1-210ENST00000560383 SPRR1AP35321 89 aa8.96□□□□□ -0.98
SNRPA1-210ENST00000560383 HIST3H2BBQ8N257 126 aa8.96□□□□□ -0.98
SNRPA1-210ENST00000560383 A0A0J9YXY3 114 aa8.95□□□□□ -0.98
SNRPA1-210ENST00000560383 TRBV10-2A0A0K0K1G8 114 aa8.95□□□□□ -0.98
SNRPA1-210ENST00000560383 NCR3O14931 201 aa8.95□□□□□ -0.98
SNRPA1-210ENST00000560383 FAM229BQ4G0N7 80 aa8.95□□□□□ -0.98
SNRPA1-210ENST00000560383 KRTDAPP60985 99 aa8.94□□□□□ -0.98
SNRPA1-210ENST00000560383 LINC00337Q8N6G1 96 aa8.94□□□□□ -0.98
SNRPA1-210ENST00000560383 TRBV10-3A0A0K0K1G6 114 aa8.93□□□□□ -0.98
SNRPA1-210ENST00000560383 KRTAP4-16G5E9R7 235 aaPredicted RBP8.93□□□□□ -0.98
SNRPA1-210ENST00000560383 NDUFC2O95298 119 aa8.93□□□□□ -0.98
SNRPA1-210ENST00000560383 SNRPEP62304 92 aaKnown RBP8.93□□□□□ -0.98
SNRPA1-210ENST00000560383 ANAPC11Q9NYG5 84 aa8.93□□□□□ -0.98
SNRPA1-210ENST00000560383 KRTAP13-2Q52LG2 175 aa8.92□□□□□ -0.98
SNRPA1-210ENST00000560383 ADAMTSL4-AS1Q5T5F5 129 aa8.92□□□□□ -0.98
SNRPA1-210ENST00000560383 HIST1H2BLQ99880 126 aa8.92□□□□□ -0.98
SNRPA1-210ENST00000560383 SPANXB1Q9NS25 103 aaPredicted RBP8.92□□□□□ -0.98
SNRPA1-210ENST00000560383 GHRHP01286 108 aa8.91□□□□□ -0.98
SNRPA1-210ENST00000560383 SOSTDC1Q6X4U4 206 aa8.91□□□□□ -0.98
SNRPA1-210ENST00000560383 TYMSOSQ8TAI1 123 aa8.91□□□□□ -0.98
SNRPA1-210ENST00000560383 MIEN1Q9BRT3 115 aa8.91□□□□□ -0.98
SNRPA1-210ENST00000560383 C5orf52A6NGY3 159 aa8.9□□□□□ -0.98
SNRPA1-210ENST00000560383 EIF4EBP3O60516 100 aaPredicted RBP8.9□□□□□ -0.98
SNRPA1-210ENST00000560383 TIMM17BO60830 172 aa8.9□□□□□ -0.98
SNRPA1-210ENST00000560383 LITAFQ99732 161 aa8.9□□□□□ -0.98
SNRPA1-210ENST00000560383 HIGD2AQ9BW72 106 aa8.9□□□□□ -0.98
SNRPA1-210ENST00000560383 C20orf202A1L168 122 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms