RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 Q8NDZ9 215 aa3.92□□□□□ -1.78
USP8-210ENST00000560379 CLEC2BQ92478 149 aa3.92□□□□□ -1.78
USP8-210ENST00000560379 CHCHD1Q96BP2 118 aaKnown RBP3.92□□□□□ -1.78
USP8-210ENST00000560379 SMDT1Q9H4I9 107 aa3.92□□□□□ -1.78
USP8-210ENST00000560379 TMEM242Q9NWH2 141 aa3.92□□□□□ -1.78
USP8-210ENST00000560379 CSMD3Q7Z407 3707 aa3.92□□□□□ -1.78
USP8-210ENST00000560379 GCHFRP30047 84 aa3.91□□□□□ -1.78
USP8-210ENST00000560379 LGALSLQ3ZCW2 172 aaPredicted RBP3.91□□□□□ -1.78
USP8-210ENST00000560379 MIR7-3HGQ8N6C7 128 aa3.91□□□□□ -1.78
USP8-210ENST00000560379 Q8NAQ8 132 aa3.91□□□□□ -1.78
USP8-210ENST00000560379 MUC7Q8TAX7 377 aa3.91□□□□□ -1.78
USP8-210ENST00000560379 CMTM2Q8TAZ6 248 aa3.91□□□□□ -1.78
USP8-210ENST00000560379 LENEPQ9Y5L5 61 aa3.91□□□□□ -1.78
USP8-210ENST00000560379 IGHV3-73A0A0B4J1V6 119 aa3.9□□□□□ -1.79
USP8-210ENST00000560379 M0R3E3 92 aa3.9□□□□□ -1.79
USP8-210ENST00000560379 TIMM17BO60830 172 aa3.9□□□□□ -1.79
USP8-210ENST00000560379 CKS2P33552 79 aa3.9□□□□□ -1.79
USP8-210ENST00000560379 DEFB1P60022 68 aa3.9□□□□□ -1.79
USP8-210ENST00000560379 SPINK13Q1W4C9 94 aa3.9□□□□□ -1.79
USP8-210ENST00000560379 TSKUQ8WUA8 353 aa3.9□□□□□ -1.79
USP8-210ENST00000560379 DYNC2H1Q8NCM8 4307 aaKnown RBP3.9□□□□□ -1.79
USP8-210ENST00000560379 KMT2CQ8NEZ4 4911 aaKnown RBP3.89□□□□□ -1.79
USP8-210ENST00000560379 TRAV1-1A0A0B4J248 108 aa3.89□□□□□ -1.79
USP8-210ENST00000560379 NUPR2A6NF83 97 aa3.89□□□□□ -1.79
USP8-210ENST00000560379 XCL1P47992 114 aa3.89□□□□□ -1.79
USP8-210ENST00000560379 CYB561D1Q8N8Q1 229 aa3.89□□□□□ -1.79
USP8-210ENST00000560379 TMEM263Q8WUH6 116 aaKnown RBP3.89□□□□□ -1.79
USP8-210ENST00000560379 IMMP2LQ96T52 175 aa3.89□□□□□ -1.79
USP8-210ENST00000560379 LINC00467Q9BRT7 94 aa3.89□□□□□ -1.79
USP8-210ENST00000560379 MANBALQ9NQG1 85 aa3.89□□□□□ -1.79
USP8-210ENST00000560379 ICOSQ9Y6W8 199 aa3.89□□□□□ -1.79
USP8-210ENST00000560379 LY96Q9Y6Y9 160 aa3.89□□□□□ -1.79
USP8-210ENST00000560379 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.88□□□□□ -1.79
USP8-210ENST00000560379 IGKV2-40A0A087WW87 121 aaPredicted RBP3.88□□□□□ -1.79
USP8-210ENST00000560379 C11orf94C9JXX5 98 aa3.88□□□□□ -1.79
USP8-210ENST00000560379 IGKV2D-40P01614 121 aaPredicted RBP3.88□□□□□ -1.79
USP8-210ENST00000560379 RPL28P46779 137 aaKnown RBP3.88□□□□□ -1.79
USP8-210ENST00000560379 ATP5EP56381 51 aaPredicted RBP3.88□□□□□ -1.79
USP8-210ENST00000560379 C2orf91Q6ZV80 131 aa3.88□□□□□ -1.79
USP8-210ENST00000560379 C5orf38Q86SI9 138 aa3.88□□□□□ -1.79
USP8-210ENST00000560379 Q8N8P6 123 aa3.88□□□□□ -1.79
USP8-210ENST00000560379 C15orf53Q8NAA6 179 aa3.88□□□□□ -1.79
USP8-210ENST00000560379 FAM213BQ8TBF2 198 aa3.88□□□□□ -1.79
USP8-210ENST00000560379 TXNDC17Q9BRA2 123 aa3.88□□□□□ -1.79
USP8-210ENST00000560379 TRAPPC1Q9Y5R8 145 aa3.88□□□□□ -1.79
USP8-210ENST00000560379 TENM2Q9NT68 2774 aa3.88□□□□□ -1.79
USP8-210ENST00000560379 ALMS1Q8TCU4 4167 aa3.88□□□□□ -1.79
USP8-210ENST00000560379 A8MUU9 505 aa3.87□□□□□ -1.79
USP8-210ENST00000560379 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
USP8-210ENST00000560379 Q86TA4 180 aa3.87□□□□□ -1.79
USP8-210ENST00000560379 SPANXA2-OT1Q8N9U9 137 aa3.87□□□□□ -1.79
USP8-210ENST00000560379 Q8TAT8 98 aa3.87□□□□□ -1.79
USP8-210ENST00000560379 LYSTQ99698 3801 aa3.87□□□□□ -1.79
USP8-210ENST00000560379 RETNLBQ9BQ08 111 aa3.87□□□□□ -1.79
USP8-210ENST00000560379 C20orf78Q9BR46 151 aa3.87□□□□□ -1.79
USP8-210ENST00000560379 PLECQ15149 4684 aaKnown RBP3.86□□□□□ -1.79
USP8-210ENST00000560379 TRAV21A0A0B4J279 112 aa3.86□□□□□ -1.79
USP8-210ENST00000560379 TRBV6-1A0A0K0K1D8 114 aa3.86□□□□□ -1.79
USP8-210ENST00000560379 TRBV7-7A0A0K0K1E9 115 aa3.86□□□□□ -1.79
USP8-210ENST00000560379 SPART-AS1P0CW21 52 aa3.86□□□□□ -1.79
USP8-210ENST00000560379 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
USP8-210ENST00000560379 C1orf64Q8NEQ6 169 aa3.86□□□□□ -1.79
USP8-210ENST00000560379 NHP2Q9NX24 153 aaKnown RBP3.86□□□□□ -1.79
USP8-210ENST00000560379 DNAH1Q9P2D7 4330 aa3.86□□□□□ -1.79
USP8-210ENST00000560379 TRAV10A0A0B4J240 114 aa3.85□□□□□ -1.79
USP8-210ENST00000560379 TRAV12-3A0A0B4J271 114 aa3.85□□□□□ -1.79
USP8-210ENST00000560379 A0A0B4J2C4 111 aa3.85□□□□□ -1.79
USP8-210ENST00000560379 IGHV1-24A0A0C4DH33 117 aa3.85□□□□□ -1.79
USP8-210ENST00000560379 GNRH2O43555 120 aa3.85□□□□□ -1.79
USP8-210ENST00000560379 UBE2G1P62253 170 aa3.85□□□□□ -1.79
USP8-210ENST00000560379 FAM229BQ4G0N7 80 aa3.85□□□□□ -1.79
USP8-210ENST00000560379 PRR9Q5T870 116 aa3.85□□□□□ -1.79
USP8-210ENST00000560379 LINC00612Q8N6U2 182 aa3.85□□□□□ -1.79
USP8-210ENST00000560379 PMCHL2Q9BQD1 86 aa3.85□□□□□ -1.79
USP8-210ENST00000560379 TP53TG3Q9ULZ0 132 aa3.85□□□□□ -1.79
USP8-210ENST00000560379 TIMM8BQ9Y5J9 83 aaPredicted RBP3.85□□□□□ -1.79
USP8-210ENST00000560379 SACSQ9NZJ4 4579 aa3.85□□□□□ -1.79
USP8-210ENST00000560379 RYR2Q92736 4967 aa3.85□□□□□ -1.79
USP8-210ENST00000560379 H3BRM9 83 aa3.84□□□□□ -1.79
USP8-210ENST00000560379 DEFB4AO15263 64 aa3.84□□□□□ -1.79
USP8-210ENST00000560379 IGKCP01834 107 aa3.84□□□□□ -1.79
USP8-210ENST00000560379 RPS10P46783 165 aaKnown RBP3.84□□□□□ -1.79
USP8-210ENST00000560379 ST20Q9HBF5 79 aa3.84□□□□□ -1.79
USP8-210ENST00000560379 GNG13Q9P2W3 67 aa3.84□□□□□ -1.79
USP8-210ENST00000560379 DNAH10OSP0CZ25 163 aa3.83□□□□□ -1.8
USP8-210ENST00000560379 FXYD2P54710 66 aa3.83□□□□□ -1.8
USP8-210ENST00000560379 SEC11AP67812 179 aa3.83□□□□□ -1.8
USP8-210ENST00000560379 ADIRFQ15847 76 aa3.83□□□□□ -1.8
USP8-210ENST00000560379 Q8N814 137 aa3.83□□□□□ -1.8
USP8-210ENST00000560379 TVP23CQ96ET8 276 aa3.83□□□□□ -1.8
USP8-210ENST00000560379 MUC4Q99102 2169 aa3.83□□□□□ -1.8
USP8-210ENST00000560379 DNAH6Q9C0G6 4158 aa3.83□□□□□ -1.8
USP8-210ENST00000560379 RYR3Q15413 4870 aa3.82□□□□□ -1.8
USP8-210ENST00000560379 TRAV7A0A075B6U4 112 aa3.82□□□□□ -1.8
USP8-210ENST00000560379 DEFB131BA0A096LNP1 70 aa3.82□□□□□ -1.8
USP8-210ENST00000560379 hADV29S1A0JD25 119 aa3.82□□□□□ -1.8
USP8-210ENST00000560379 hDV103S1A0JD37 113 aa3.82□□□□□ -1.8
USP8-210ENST00000560379 IBA57-AS1B1ANH7 110 aa3.82□□□□□ -1.8
USP8-210ENST00000560379 SPINK4O60575 86 aa3.82□□□□□ -1.8
USP8-210ENST00000560379 IGLC3P0DOY3 106 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms