RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 LINC00167Q96N53 147 aa6.77□□□□□ -1.33
LRRC28-216ENST00000559819 LINC00846Q9NV44 126 aa6.77□□□□□ -1.33
LRRC28-216ENST00000559819 CMYA5Q8N3K9 4069 aa6.76□□□□□ -1.33
LRRC28-216ENST00000559819 S100A7L2Q5SY68 101 aa6.76□□□□□ -1.33
LRRC28-216ENST00000559819 ANK2Q01484 3957 aa6.76□□□□□ -1.33
LRRC28-216ENST00000559819 IGKV3D-7A0A0C4DH55 119 aa6.75□□□□□ -1.33
LRRC28-216ENST00000559819 RPL18AQ02543 176 aaKnown RBP6.75□□□□□ -1.33
LRRC28-216ENST00000559819 IMUPQ9GZP8 106 aa6.75□□□□□ -1.33
LRRC28-216ENST00000559819 C3orf56Q8N813 242 aa6.75□□□□□ -1.33
LRRC28-216ENST00000559819 C6orf48Q9UBA6 75 aa6.75□□□□□ -1.33
LRRC28-216ENST00000559819 WIPF1O43516 503 aa6.74□□□□□ -1.33
LRRC28-216ENST00000559819 HIGD2BQ4VC39 106 aa6.74□□□□□ -1.33
LRRC28-216ENST00000559819 Q6ZTC4 211 aa6.74□□□□□ -1.33
LRRC28-216ENST00000559819 XAGE1AQ9HD64 81 aa6.74□□□□□ -1.33
LRRC28-216ENST00000559819 A0A0J9YWU9 116 aa6.74□□□□□ -1.33
LRRC28-216ENST00000559819 KPRPQ5T749 579 aaPredicted RBP6.74□□□□□ -1.33
LRRC28-216ENST00000559819 A0A1B0GX51 115 aa6.72□□□□□ -1.33
LRRC28-216ENST00000559819 LINC00575Q6W349 94 aa6.72□□□□□ -1.33
LRRC28-216ENST00000559819 IGLV6-57P01721 117 aa6.71□□□□□ -1.34
LRRC28-216ENST00000559819 CCKP06307 115 aa6.71□□□□□ -1.34
LRRC28-216ENST00000559819 TRBV10-3A0A0K0K1G6 114 aa6.7□□□□□ -1.34
LRRC28-216ENST00000559819 TMEM256-PLSCR3K7ERE1 68 aa6.7□□□□□ -1.34
LRRC28-216ENST00000559819 A0A087WVE0 104 aa6.7□□□□□ -1.34
LRRC28-216ENST00000559819 KRTAP26-1Q6PEX3 210 aa6.7□□□□□ -1.34
LRRC28-216ENST00000559819 GVQW2A0A096LPI5 108 aaPredicted RBP6.7□□□□□ -1.34
LRRC28-216ENST00000559819 ESRGQ1W209 222 aa6.7□□□□□ -1.34
LRRC28-216ENST00000559819 hADV29S1A0JD25 119 aa6.69□□□□□ -1.34
LRRC28-216ENST00000559819 JMJD7-PLA2G4BH0Y9G9 81 aa6.69□□□□□ -1.34
LRRC28-216ENST00000559819 Q6JHZ5 121 aa6.69□□□□□ -1.34
LRRC28-216ENST00000559819 CAMK2N2Q96S95 79 aa6.69□□□□□ -1.34
LRRC28-216ENST00000559819 ZNF561-AS1K7EIQ3 104 aa6.69□□□□□ -1.34
LRRC28-216ENST00000559819 Q6ZRU5 148 aa6.68□□□□□ -1.34
LRRC28-216ENST00000559819 PKD1L1Q8TDX9 2849 aa6.68□□□□□ -1.34
LRRC28-216ENST00000559819 TENM3Q9P273 2699 aa6.68□□□□□ -1.34
LRRC28-216ENST00000559819 TRAV23DV6A0A075B6W5 121 aa6.68□□□□□ -1.34
LRRC28-216ENST00000559819 KRTAP24-1Q3LI83 254 aa6.68□□□□□ -1.34
LRRC28-216ENST00000559819 C15orf56Q8N910 161 aa6.68□□□□□ -1.34
LRRC28-216ENST00000559819 MUC7Q8TAX7 377 aa6.67□□□□□ -1.34
LRRC28-216ENST00000559819 DNAH3Q8TD57 4116 aa6.67□□□□□ -1.34
LRRC28-216ENST00000559819 M0R2N4 97 aa6.67□□□□□ -1.34
LRRC28-216ENST00000559819 Q6ZQY7 126 aa6.67□□□□□ -1.34
LRRC28-216ENST00000559819 F8P00451 2351 aa6.66□□□□□ -1.34
LRRC28-216ENST00000559819 HIST1H4AP62805 103 aaKnown RBP6.66□□□□□ -1.34
LRRC28-216ENST00000559819 H3BNG1 76 aa6.66□□□□□ -1.34
LRRC28-216ENST00000559819 LAMTOR3Q9UHA4 124 aa6.66□□□□□ -1.34
LRRC28-216ENST00000559819 FLNBO75369 2602 aaKnown RBP6.65□□□□□ -1.34
LRRC28-216ENST00000559819 C3orf22Q8N5N4 141 aa6.65□□□□□ -1.34
LRRC28-216ENST00000559819 IGKV2D-24A0A075B6R9 120 aa6.65□□□□□ -1.35
LRRC28-216ENST00000559819 VPREB1P12018 145 aa6.65□□□□□ -1.35
LRRC28-216ENST00000559819 DIRC1Q969H9 104 aa6.65□□□□□ -1.35
LRRC28-216ENST00000559819 DEFB131BA0A096LNP1 70 aa6.64□□□□□ -1.35
LRRC28-216ENST00000559819 F8WDY8 70 aa6.64□□□□□ -1.35
LRRC28-216ENST00000559819 ZNF73O43830 326 aaPredicted RBP6.64□□□□□ -1.35
LRRC28-216ENST00000559819 EGFEM1PQ0D2K5 195 aa6.64□□□□□ -1.35
LRRC28-216ENST00000559819 C9orf153Q5TBE3 101 aa6.64□□□□□ -1.35
LRRC28-216ENST00000559819 RBM3P98179 157 aaKnown RBP6.64□□□□□ -1.35
LRRC28-216ENST00000559819 C2orf48Q96LS8 159 aa6.64□□□□□ -1.35
LRRC28-216ENST00000559819 Q6ZQT0 140 aa6.63□□□□□ -1.35
LRRC28-216ENST00000559819 C1orf43Q9BWL3 253 aa6.63□□□□□ -1.35
LRRC28-216ENST00000559819 COX7BP24311 80 aa6.63□□□□□ -1.35
LRRC28-216ENST00000559819 C5orf47Q569G3 176 aa6.63□□□□□ -1.35
LRRC28-216ENST00000559819 C11orf45Q8TAV5 145 aa6.63□□□□□ -1.35
LRRC28-216ENST00000559819 FBN1P35555 2871 aaKnown RBP6.63□□□□□ -1.35
LRRC28-216ENST00000559819 STAB1Q9NY15 2570 aa6.63□□□□□ -1.35
LRRC28-216ENST00000559819 PRB2P02812 416 aaPredicted RBP6.63□□□□□ -1.35
LRRC28-216ENST00000559819 Q6ZRP5 223 aa6.63□□□□□ -1.35
LRRC28-216ENST00000559819 FAM19A1Q7Z5A9 133 aa6.63□□□□□ -1.35
LRRC28-216ENST00000559819 ATOX1O00244 68 aa6.62□□□□□ -1.35
LRRC28-216ENST00000559819 UQCRQO14949 82 aa6.62□□□□□ -1.35
LRRC28-216ENST00000559819 NDUFC2-KCTD14E9PQ53 114 aa6.62□□□□□ -1.35
LRRC28-216ENST00000559819 COX7CP15954 63 aa6.62□□□□□ -1.35
LRRC28-216ENST00000559819 ELOF1P60002 83 aaKnown RBP6.61□□□□□ -1.35
LRRC28-216ENST00000559819 LINC01556Q5JQF7 62 aa6.61□□□□□ -1.35
LRRC28-216ENST00000559819 M0R378 163 aa6.61□□□□□ -1.35
LRRC28-216ENST00000559819 LOC110117498A0A087WWA1 95 aa6.6□□□□□ -1.35
LRRC28-216ENST00000559819 USP17L23D6RBM5 183 aa6.6□□□□□ -1.35
LRRC28-216ENST00000559819 DNAH1Q9P2D7 4330 aa6.6□□□□□ -1.35
LRRC28-216ENST00000559819 UBL5Q9BZL1 73 aa6.6□□□□□ -1.35
LRRC28-216ENST00000559819 DSCR8Q96T75 97 aa6.59□□□□□ -1.35
LRRC28-216ENST00000559819 CYSTM1Q9H1C7 97 aa6.59□□□□□ -1.35
LRRC28-216ENST00000559819 SYCNQ0VAF6 134 aa6.59□□□□□ -1.35
LRRC28-216ENST00000559819 SMIM20Q8N5G0 67 aa6.59□□□□□ -1.35
LRRC28-216ENST00000559819 CASC10Q5T4H9 136 aa6.58□□□□□ -1.36
LRRC28-216ENST00000559819 HUWE1Q7Z6Z7 4374 aaKnown RBP6.58□□□□□ -1.36
LRRC28-216ENST00000559819 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
LRRC28-216ENST00000559819 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.58□□□□□ -1.36
LRRC28-216ENST00000559819 MAST4O15021 2626 aa6.57□□□□□ -1.36
LRRC28-216ENST00000559819 ATP5EP2Q5VTU8 51 aa6.57□□□□□ -1.36
LRRC28-216ENST00000559819 LINC00528Q8N1L1 170 aa6.57□□□□□ -1.36
LRRC28-216ENST00000559819 UPK3BQ9BT76 320 aa6.56□□□□□ -1.36
LRRC28-216ENST00000559819 NOTCH1P46531 2555 aa6.56□□□□□ -1.36
LRRC28-216ENST00000559819 DNAH10OSP0CZ25 163 aa6.56□□□□□ -1.36
LRRC28-216ENST00000559819 Q6ZVQ6 151 aa6.56□□□□□ -1.36
LRRC28-216ENST00000559819 MRAPQ8TCY5 172 aa6.56□□□□□ -1.36
LRRC28-216ENST00000559819 LINC00588Q9Y4M8 146 aa6.56□□□□□ -1.36
LRRC28-216ENST00000559819 TRBV7-6A0A0J9YX20 115 aa6.56□□□□□ -1.36
LRRC28-216ENST00000559819 HAMPP81172 84 aa6.56□□□□□ -1.36
LRRC28-216ENST00000559819 SERP2Q8N6R1 65 aa6.56□□□□□ -1.36
LRRC28-216ENST00000559819 GHRHP01286 108 aa6.55□□□□□ -1.36
LRRC28-216ENST00000559819 CRYGAP11844 174 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms