RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 H3BRM9 83 aa6.77□□□□□ -1.33
USP3-214ENST00000559718 S100PP25815 95 aa6.77□□□□□ -1.33
USP3-214ENST00000559718 FABP9Q0Z7S8 132 aa6.77□□□□□ -1.33
USP3-214ENST00000559718 UQCC3Q6UW78 93 aa6.77□□□□□ -1.33
USP3-214ENST00000559718 SMCO4Q9NRQ5 59 aa6.77□□□□□ -1.33
USP3-214ENST00000559718 A0A096LNJ9 63 aa6.76□□□□□ -1.33
USP3-214ENST00000559718 IGLV5-39A0A0G2JS06 123 aa6.76□□□□□ -1.33
USP3-214ENST00000559718 TMEM238C9JI98 176 aa6.76□□□□□ -1.33
USP3-214ENST00000559718 IGLC3P0DOY3 106 aa6.76□□□□□ -1.33
USP3-214ENST00000559718 VPREB1P12018 145 aa6.76□□□□□ -1.33
USP3-214ENST00000559718 ZNF22P17026 224 aaPredicted RBP6.76□□□□□ -1.33
USP3-214ENST00000559718 NDUFA6P56556 154 aa6.76□□□□□ -1.33
USP3-214ENST00000559718 IFITM2Q01629 132 aa6.76□□□□□ -1.33
USP3-214ENST00000559718 Q8NDZ9 215 aa6.76□□□□□ -1.33
USP3-214ENST00000559718 SND1-IT1Q9HBX3 110 aa6.76□□□□□ -1.33
USP3-214ENST00000559718 FAM229BQ4G0N7 80 aa6.75□□□□□ -1.33
USP3-214ENST00000559718 FAM19A1Q7Z5A9 133 aa6.75□□□□□ -1.33
USP3-214ENST00000559718 LINC00304Q8N9R0 145 aa6.75□□□□□ -1.33
USP3-214ENST00000559718 URB1-AS1Q96HZ7 61 aa6.75□□□□□ -1.33
USP3-214ENST00000559718 ZNF625Q96I27 306 aaPredicted RBP6.75□□□□□ -1.33
USP3-214ENST00000559718 SEC11CQ9BY50 192 aa6.75□□□□□ -1.33
USP3-214ENST00000559718 ERG28Q9UKR5 140 aa6.75□□□□□ -1.33
USP3-214ENST00000559718 PMCHL1Q16048 86 aa6.74□□□□□ -1.33
USP3-214ENST00000559718 TMEM126AQ9H061 195 aa6.74□□□□□ -1.33
USP3-214ENST00000559718 M0R378 163 aa6.73□□□□□ -1.33
USP3-214ENST00000559718 COX19Q49B96 90 aa6.73□□□□□ -1.33
USP3-214ENST00000559718 IGKV2D-26A0A0A0MRZ7 120 aa6.72□□□□□ -1.33
USP3-214ENST00000559718 A0A0U1RQV1 116 aa6.72□□□□□ -1.33
USP3-214ENST00000559718 C11orf86A6NJI1 115 aa6.72□□□□□ -1.33
USP3-214ENST00000559718 FAT4Q6V0I7 4981 aa6.72□□□□□ -1.33
USP3-214ENST00000559718 LINC00614P0C842 121 aa6.71□□□□□ -1.34
USP3-214ENST00000559718 RPL24P83731 157 aaKnown RBP6.71□□□□□ -1.34
USP3-214ENST00000559718 C3orf22Q8N5N4 141 aa6.71□□□□□ -1.34
USP3-214ENST00000559718 C18orf32Q8TCD1 76 aa6.71□□□□□ -1.34
USP3-214ENST00000559718 PLEKHB2Q96CS7 222 aa6.71□□□□□ -1.34
USP3-214ENST00000559718 RPS10P5Q9NQ39 176 aa6.71□□□□□ -1.34
USP3-214ENST00000559718 HBDP02042 147 aa6.7□□□□□ -1.34
USP3-214ENST00000559718 COX17Q14061 63 aa6.7□□□□□ -1.34
USP3-214ENST00000559718 TMEM170BQ5T4T1 132 aa6.7□□□□□ -1.34
USP3-214ENST00000559718 COMMD7Q86VX2 200 aa6.7□□□□□ -1.34
USP3-214ENST00000559718 BAGE3Q86Y29 109 aa6.7□□□□□ -1.34
USP3-214ENST00000559718 IGLV7-46A0A075B6I9 117 aa6.69□□□□□ -1.34
USP3-214ENST00000559718 RHEBQ15382 184 aa6.69□□□□□ -1.34
USP3-214ENST00000559718 C10orf91Q5T1B1 145 aa6.69□□□□□ -1.34
USP3-214ENST00000559718 CBLN2Q8IUK8 224 aa6.69□□□□□ -1.34
USP3-214ENST00000559718 HIGD2AQ9BW72 106 aa6.69□□□□□ -1.34
USP3-214ENST00000559718 TRAPPC1Q9Y5R8 145 aa6.69□□□□□ -1.34
USP3-214ENST00000559718 MUC17Q685J3 4493 aa6.68□□□□□ -1.34
USP3-214ENST00000559718 A0A0U1RRA0 63 aa6.68□□□□□ -1.34
USP3-214ENST00000559718 CDIP1Q9H305 208 aa6.68□□□□□ -1.34
USP3-214ENST00000559718 LINC00158P58513 81 aa6.67□□□□□ -1.34
USP3-214ENST00000559718 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
USP3-214ENST00000559718 SFTA2Q6UW10 78 aa6.65□□□□□ -1.34
USP3-214ENST00000559718 SPRR4Q96PI1 79 aa6.65□□□□□ -1.34
USP3-214ENST00000559718 CHTOPQ9Y3Y2 248 aaKnown RBP6.65□□□□□ -1.34
USP3-214ENST00000559718 TMEM223A0PJW6 202 aa6.64□□□□□ -1.35
USP3-214ENST00000559718 PPDPFQ9H3Y8 114 aa6.64□□□□□ -1.35
USP3-214ENST00000559718 SMIM13P0DJ93 91 aa6.63□□□□□ -1.35
USP3-214ENST00000559718 CTAG1AP78358 180 aa6.63□□□□□ -1.35
USP3-214ENST00000559718 NCR3O14931 201 aa6.62□□□□□ -1.35
USP3-214ENST00000559718 BOD1L2Q8IYS8 172 aa6.62□□□□□ -1.35
USP3-214ENST00000559718 DAND5Q8N907 189 aa6.62□□□□□ -1.35
USP3-214ENST00000559718 SPAG11AQ6PDA7 123 aa6.61□□□□□ -1.35
USP3-214ENST00000559718 MIR7-3HGQ8N6C7 128 aa6.61□□□□□ -1.35
USP3-214ENST00000559718 Q8NBF4 154 aa6.61□□□□□ -1.35
USP3-214ENST00000559718 IFI27L1Q96BM0 104 aa6.61□□□□□ -1.35
USP3-214ENST00000559718 TRAV12-1A0A0B4J245 112 aa6.6□□□□□ -1.35
USP3-214ENST00000559718 PRYO14603 147 aa6.6□□□□□ -1.35
USP3-214ENST00000559718 ATP6V1G1O75348 118 aa6.6□□□□□ -1.35
USP3-214ENST00000559718 APOC3P02656 99 aa6.6□□□□□ -1.35
USP3-214ENST00000559718 SPRR1AP35321 89 aa6.6□□□□□ -1.35
USP3-214ENST00000559718 MEIG1Q5JSS6 88 aa6.6□□□□□ -1.35
USP3-214ENST00000559718 SMCR5Q8TEV8 140 aa6.6□□□□□ -1.35
USP3-214ENST00000559718 KRTAP4-16G5E9R7 235 aaPredicted RBP6.59□□□□□ -1.35
USP3-214ENST00000559718 KCNQ1DNQ9H478 68 aa6.59□□□□□ -1.35
USP3-214ENST00000559718 ZNF706Q9Y5V0 76 aaPredicted RBP6.59□□□□□ -1.35
USP3-214ENST00000559718 TRBV10-3A0A0K0K1G6 114 aa6.58□□□□□ -1.36
USP3-214ENST00000559718 LINC00337Q8N6G1 96 aa6.58□□□□□ -1.36
USP3-214ENST00000559718 CHCHD1Q96BP2 118 aaKnown RBP6.58□□□□□ -1.36
USP3-214ENST00000559718 YPEL4Q96NS1 127 aa6.58□□□□□ -1.36
USP3-214ENST00000559718 ETDCA0A1B0GVM5 59 aa6.57□□□□□ -1.36
USP3-214ENST00000559718 KRTAP13-3Q3SY46 172 aa6.57□□□□□ -1.36
USP3-214ENST00000559718 FP248Q71RG6 208 aaPredicted RBP6.57□□□□□ -1.36
USP3-214ENST00000559718 FAM19A2Q8N3H0 131 aa6.57□□□□□ -1.36
USP3-214ENST00000559718 KRTAP3-1Q9BYR8 98 aa6.57□□□□□ -1.36
USP3-214ENST00000559718 NDUFA12Q9UI09 145 aa6.57□□□□□ -1.36
USP3-214ENST00000559718 ERC2-IT1O76042 136 aa6.56□□□□□ -1.36
USP3-214ENST00000559718 SNAPINO95295 136 aa6.56□□□□□ -1.36
USP3-214ENST00000559718 TSPEAR-AS2P59090 65 aa6.56□□□□□ -1.36
USP3-214ENST00000559718 HERV-K104P63124 156 aa6.56□□□□□ -1.36
USP3-214ENST00000559718 GAGE2AQ6NT46 116 aa6.56□□□□□ -1.36
USP3-214ENST00000559718 H0Y8G0 127 aa6.55□□□□□ -1.36
USP3-214ENST00000559718 LINC00483Q53H64 154 aa6.55□□□□□ -1.36
USP3-214ENST00000559718 SVBPQ8N300 66 aa6.55□□□□□ -1.36
USP3-214ENST00000559718 MYMXA0A1B0GTQ4 84 aa6.54□□□□□ -1.36
USP3-214ENST00000559718 B5MCH6 92 aa6.54□□□□□ -1.36
USP3-214ENST00000559718 SPINK1P00995 79 aa6.54□□□□□ -1.36
USP3-214ENST00000559718 MOBPQ13875 183 aa6.54□□□□□ -1.36
USP3-214ENST00000559718 IGLV9-49A0A0B4J1Y8 123 aa6.53□□□□□ -1.36
USP3-214ENST00000559718 LINC00587B1AMM8 73 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 237.5 ms