RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 B9D2Q9BPU9 175 aa7.46□□□□□ -1.22
CARMIL3-202ENST00000559694 SMIM1B2RUZ4 78 aa7.46□□□□□ -1.22
CARMIL3-202ENST00000559694 COX6A2Q02221 97 aa7.46□□□□□ -1.22
CARMIL3-202ENST00000559694 DIRC1Q969H9 104 aa7.45□□□□□ -1.22
CARMIL3-202ENST00000559694 Q9UF83 564 aa7.45□□□□□ -1.22
CARMIL3-202ENST00000559694 FUSP35637 526 aaKnown RBP eCLIP7.45□□□□□ -1.22
CARMIL3-202ENST00000559694 LINC00315P59091 139 aa7.45□□□□□ -1.22
CARMIL3-202ENST00000559694 C19orf73Q9NVV2 129 aa7.44□□□□□ -1.22
CARMIL3-202ENST00000559694 RPL28P46779 137 aaKnown RBP7.44□□□□□ -1.22
CARMIL3-202ENST00000559694 UBE2AP49459 152 aa7.44□□□□□ -1.22
CARMIL3-202ENST00000559694 ZANQ9Y493 2812 aa7.44□□□□□ -1.22
CARMIL3-202ENST00000559694 H3BQ85 93 aa7.43□□□□□ -1.22
CARMIL3-202ENST00000559694 A0A087WYN8 130 aa7.43□□□□□ -1.22
CARMIL3-202ENST00000559694 ESRGQ1W209 222 aa7.43□□□□□ -1.22
CARMIL3-202ENST00000559694 A0A087WZ39 114 aa7.42□□□□□ -1.22
CARMIL3-202ENST00000559694 NDUFC2-KCTD14E9PQ53 114 aa7.42□□□□□ -1.22
CARMIL3-202ENST00000559694 LINC00846Q9NV44 126 aa7.42□□□□□ -1.22
CARMIL3-202ENST00000559694 CRYBG3Q68DQ2 2970 aa7.41□□□□□ -1.22
CARMIL3-202ENST00000559694 CYSRT1A8MQ03 144 aa7.41□□□□□ -1.22
CARMIL3-202ENST00000559694 CCKP06307 115 aa7.41□□□□□ -1.22
CARMIL3-202ENST00000559694 CSNK1G2-AS1Q8NCQ2 148 aa7.41□□□□□ -1.22
CARMIL3-202ENST00000559694 WDFY3Q8IZQ1 3526 aa7.4□□□□□ -1.22
CARMIL3-202ENST00000559694 DCHS1Q96JQ0 3298 aa7.4□□□□□ -1.22
CARMIL3-202ENST00000559694 BPY2O14599 106 aa7.4□□□□□ -1.22
CARMIL3-202ENST00000559694 COX7BP24311 80 aa7.4□□□□□ -1.22
CARMIL3-202ENST00000559694 NSD1Q96L73 2696 aaPredicted RBP7.4□□□□□ -1.22
CARMIL3-202ENST00000559694 A0A1B0GUV1 79 aa7.4□□□□□ -1.23
CARMIL3-202ENST00000559694 UNQ6190/PRO20217Q6UXQ8 127 aa7.4□□□□□ -1.23
CARMIL3-202ENST00000559694 Q6ZQY7 126 aa7.4□□□□□ -1.23
CARMIL3-202ENST00000559694 NTM-AS1Q6ZSK4 140 aa7.4□□□□□ -1.23
CARMIL3-202ENST00000559694 MUC7Q8TAX7 377 aa7.39□□□□□ -1.23
CARMIL3-202ENST00000559694 HIGD2AQ9BW72 106 aa7.39□□□□□ -1.23
CARMIL3-202ENST00000559694 GIG44P09565 113 aaPredicted RBP7.39□□□□□ -1.23
CARMIL3-202ENST00000559694 C1orf134Q5TEV5 83 aa7.39□□□□□ -1.23
CARMIL3-202ENST00000559694 CELSR2Q9HCU4 2923 aa7.38□□□□□ -1.23
CARMIL3-202ENST00000559694 A8MTW9 85 aa7.38□□□□□ -1.23
CARMIL3-202ENST00000559694 EGFEM1PQ0D2K5 195 aa7.38□□□□□ -1.23
CARMIL3-202ENST00000559694 WWC2-AS2Q96NR7 200 aa7.38□□□□□ -1.23
CARMIL3-202ENST00000559694 DMDP11532 3685 aa7.37□□□□□ -1.23
CARMIL3-202ENST00000559694 LRCOL1A6NCL2 159 aa7.37□□□□□ -1.23
CARMIL3-202ENST00000559694 FAM19A1Q7Z5A9 133 aa7.37□□□□□ -1.23
CARMIL3-202ENST00000559694 SMIM26A0A096LP01 95 aa7.37□□□□□ -1.23
CARMIL3-202ENST00000559694 NDUFC1O43677 76 aa7.37□□□□□ -1.23
CARMIL3-202ENST00000559694 CDK2AP2O75956 126 aa7.37□□□□□ -1.23
CARMIL3-202ENST00000559694 CRYGAP11844 174 aa7.37□□□□□ -1.23
CARMIL3-202ENST00000559694 LINC00337Q8N6G1 96 aa7.37□□□□□ -1.23
CARMIL3-202ENST00000559694 Q8IZM0 81 aa7.36□□□□□ -1.23
CARMIL3-202ENST00000559694 TRAV7A0A075B6U4 112 aa7.36□□□□□ -1.23
CARMIL3-202ENST00000559694 PRR3P79522 188 aaKnown RBP7.36□□□□□ -1.23
CARMIL3-202ENST00000559694 C9orf116Q5BN46 136 aaPredicted RBP7.36□□□□□ -1.23
CARMIL3-202ENST00000559694 MP68P56378 58 aa7.36□□□□□ -1.23
CARMIL3-202ENST00000559694 SERP1Q9Y6X1 66 aa7.35□□□□□ -1.23
CARMIL3-202ENST00000559694 NBEAL2Q6ZNJ1 2754 aa7.35□□□□□ -1.23
CARMIL3-202ENST00000559694 Q8N814 137 aa7.35□□□□□ -1.23
CARMIL3-202ENST00000559694 H3BNG1 76 aa7.35□□□□□ -1.23
CARMIL3-202ENST00000559694 IGKV2-28A0A075B6P5 120 aa7.34□□□□□ -1.23
CARMIL3-202ENST00000559694 IGKV2D-28P01615 120 aa7.34□□□□□ -1.23
CARMIL3-202ENST00000559694 V9GYY9 64 aa7.34□□□□□ -1.23
CARMIL3-202ENST00000559694 LINC01556Q5JQF7 62 aa7.34□□□□□ -1.23
CARMIL3-202ENST00000559694 FAM218AQ96MZ4 157 aa7.34□□□□□ -1.23
CARMIL3-202ENST00000559694 LAMA5O15230 3695 aa7.33□□□□□ -1.24
CARMIL3-202ENST00000559694 C7orf33Q8WU49 177 aa7.33□□□□□ -1.24
CARMIL3-202ENST00000559694 NIPBLQ6KC79 2804 aaeCLIP7.33□□□□□ -1.24
CARMIL3-202ENST00000559694 IGLV5-39A0A0G2JS06 123 aa7.33□□□□□ -1.24
CARMIL3-202ENST00000559694 C6orf223Q8N319 242 aa7.33□□□□□ -1.24
CARMIL3-202ENST00000559694 ATP5EP56381 51 aaPredicted RBP7.33□□□□□ -1.24
CARMIL3-202ENST00000559694 SOSTDC1Q6X4U4 206 aa7.33□□□□□ -1.24
CARMIL3-202ENST00000559694 Q8N3U1 123 aa7.33□□□□□ -1.24
CARMIL3-202ENST00000559694 C3orf84H3BNL1 204 aa7.32□□□□□ -1.24
CARMIL3-202ENST00000559694 FAM19A3Q7Z5A8 133 aa7.32□□□□□ -1.24
CARMIL3-202ENST00000559694 IGLV5-52A0A0A0MRZ9 124 aa7.32□□□□□ -1.24
CARMIL3-202ENST00000559694 RPS28P62857 69 aaKnown RBP7.32□□□□□ -1.24
CARMIL3-202ENST00000559694 LITAFQ99732 161 aa7.32□□□□□ -1.24
CARMIL3-202ENST00000559694 LINC00588Q9Y4M8 146 aa7.32□□□□□ -1.24
CARMIL3-202ENST00000559694 ASPMQ8IZT6 3477 aa7.32□□□□□ -1.24
CARMIL3-202ENST00000559694 A0A096LNI7 61 aa7.31□□□□□ -1.24
CARMIL3-202ENST00000559694 RPL37AP8A6NKH3 93 aa7.31□□□□□ -1.24
CARMIL3-202ENST00000559694 C4orf26Q17RF5 130 aa7.31□□□□□ -1.24
CARMIL3-202ENST00000559694 TM2D3Q9BRN9 247 aa7.31□□□□□ -1.24
CARMIL3-202ENST00000559694 RELNP78509 3460 aa7.31□□□□□ -1.24
CARMIL3-202ENST00000559694 C1orf195Q5TG92 126 aa7.31□□□□□ -1.24
CARMIL3-202ENST00000559694 SMCR5Q8TEV8 140 aa7.3□□□□□ -1.24
CARMIL3-202ENST00000559694 PLAC8L1A1L4L8 177 aa7.29□□□□□ -1.24
CARMIL3-202ENST00000559694 C4orf48Q5BLP8 95 aa7.29□□□□□ -1.24
CARMIL3-202ENST00000559694 PRR4Q16378 134 aa7.28□□□□□ -1.24
CARMIL3-202ENST00000559694 LINC00474Q9P2X8 69 aa7.28□□□□□ -1.24
CARMIL3-202ENST00000559694 IGHV3OR16-9A0A0B4J2B5 98 aa7.28□□□□□ -1.24
CARMIL3-202ENST00000559694 EIF4EBP3O60516 100 aaPredicted RBP7.28□□□□□ -1.24
CARMIL3-202ENST00000559694 COX17Q14061 63 aa7.28□□□□□ -1.24
CARMIL3-202ENST00000559694 M0R378 163 aa7.28□□□□□ -1.24
CARMIL3-202ENST00000559694 SPTSSBQ8NFR3 76 aa7.28□□□□□ -1.24
CARMIL3-202ENST00000559694 IGLV5-45A0A087WSX0 123 aa7.27□□□□□ -1.25
CARMIL3-202ENST00000559694 NBDYA0A0U1RRE5 68 aa7.27□□□□□ -1.25
CARMIL3-202ENST00000559694 Q6ZRU5 148 aa7.27□□□□□ -1.25
CARMIL3-202ENST00000559694 HRNRQ86YZ3 2850 aaPredicted RBP7.27□□□□□ -1.25
CARMIL3-202ENST00000559694 TENM4Q6N022 2769 aa7.26□□□□□ -1.25
CARMIL3-202ENST00000559694 ZNF73O43830 326 aaPredicted RBP7.26□□□□□ -1.25
CARMIL3-202ENST00000559694 Q6ZVQ6 151 aa7.26□□□□□ -1.25
CARMIL3-202ENST00000559694 ZNF575Q86XF7 245 aa7.26□□□□□ -1.25
CARMIL3-202ENST00000559694 NDUFS5O43920 106 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms