RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 S100A12P80511 92 aa11.2□□□□□ -0.62
KNSTRN-208ENST00000559604 KRTAP13-2Q52LG2 175 aa11.2□□□□□ -0.62
KNSTRN-208ENST00000559604 CBLN2Q8IUK8 224 aa11.2□□□□□ -0.62
KNSTRN-208ENST00000559604 CHTOPQ9Y3Y2 248 aaKnown RBP11.2□□□□□ -0.62
KNSTRN-208ENST00000559604 TMEM238C9JI98 176 aa11.19□□□□□ -0.62
KNSTRN-208ENST00000559604 RPL24P83731 157 aaKnown RBP11.19□□□□□ -0.62
KNSTRN-208ENST00000559604 TMEM126AQ9H061 195 aa11.19□□□□□ -0.62
KNSTRN-208ENST00000559604 PRLHP81277 87 aa11.18□□□□□ -0.62
KNSTRN-208ENST00000559604 SFTA2Q6UW10 78 aa11.18□□□□□ -0.62
KNSTRN-208ENST00000559604 MUC2Q02817 5179 aa11.18□□□□□ -0.62
KNSTRN-208ENST00000559604 FAM229BQ4G0N7 80 aa11.17□□□□□ -0.62
KNSTRN-208ENST00000559604 M0R378 163 aa11.16□□□□□ -0.62
KNSTRN-208ENST00000559604 FAM19A1Q7Z5A9 133 aa11.16□□□□□ -0.62
KNSTRN-208ENST00000559604 TRAV12-1A0A0B4J245 112 aa11.15□□□□□ -0.62
KNSTRN-208ENST00000559604 TMEM223A0PJW6 202 aa11.15□□□□□ -0.62
KNSTRN-208ENST00000559604 CHCHD1Q96BP2 118 aaKnown RBP11.15□□□□□ -0.62
KNSTRN-208ENST00000559604 IFI27L1Q96BM0 104 aa11.14□□□□□ -0.63
KNSTRN-208ENST00000559604 LINC00158P58513 81 aa11.13□□□□□ -0.63
KNSTRN-208ENST00000559604 A0A0U1RRA0 63 aa11.12□□□□□ -0.63
KNSTRN-208ENST00000559604 COLCA2A8K830 154 aa11.12□□□□□ -0.63
KNSTRN-208ENST00000559604 LINC00304Q8N9R0 145 aa11.1□□□□□ -0.63
KNSTRN-208ENST00000559604 PLEKHB2Q96CS7 222 aa11.1□□□□□ -0.63
KNSTRN-208ENST00000559604 CTAG1AP78358 180 aa11.09□□□□□ -0.63
KNSTRN-208ENST00000559604 IGKV2D-26A0A0A0MRZ7 120 aa11.08□□□□□ -0.64
KNSTRN-208ENST00000559604 SMIM13P0DJ93 91 aa11.08□□□□□ -0.64
KNSTRN-208ENST00000559604 FAM19A2Q8N3H0 131 aa11.08□□□□□ -0.64
KNSTRN-208ENST00000559604 TRGC2P03986 189 aa11.07□□□□□ -0.64
KNSTRN-208ENST00000559604 SMIM6P0DI80 62 aa11.07□□□□□ -0.64
KNSTRN-208ENST00000559604 HSBP1O75506 76 aa11.06□□□□□ -0.64
KNSTRN-208ENST00000559604 RETNLBQ9BQ08 111 aa11.06□□□□□ -0.64
KNSTRN-208ENST00000559604 HIGD2AQ9BW72 106 aa11.06□□□□□ -0.64
KNSTRN-208ENST00000559604 S100A6P06703 90 aa11.05□□□□□ -0.64
KNSTRN-208ENST00000559604 AKR1D1P51857 326 aa11.05□□□□□ -0.64
KNSTRN-208ENST00000559604 MEIG1Q5JSS6 88 aa11.05□□□□□ -0.64
KNSTRN-208ENST00000559604 C12orf57Q99622 126 aa11.05□□□□□ -0.64
KNSTRN-208ENST00000559604 BOD1L2Q8IYS8 172 aa11.04□□□□□ -0.64
KNSTRN-208ENST00000559604 C3orf22Q8N5N4 141 aa11.04□□□□□ -0.64
KNSTRN-208ENST00000559604 MIR7-3HGQ8N6C7 128 aa11.04□□□□□ -0.64
KNSTRN-208ENST00000559604 C5orf52A6NGY3 159 aa11.03□□□□□ -0.64
KNSTRN-208ENST00000559604 HERV-K104P63124 156 aa11.03□□□□□ -0.64
KNSTRN-208ENST00000559604 SPRR4Q96PI1 79 aa11.02□□□□□ -0.65
KNSTRN-208ENST00000559604 NDUFA12Q9UI09 145 aa11.02□□□□□ -0.65
KNSTRN-208ENST00000559604 MUC17Q685J3 4493 aa11.02□□□□□ -0.65
KNSTRN-208ENST00000559604 H0Y8G0 127 aa11.01□□□□□ -0.65
KNSTRN-208ENST00000559604 PRYO14603 147 aa11.01□□□□□ -0.65
KNSTRN-208ENST00000559604 NCR3O14931 201 aa11.01□□□□□ -0.65
KNSTRN-208ENST00000559604 LINC00310P59036 64 aa11.01□□□□□ -0.65
KNSTRN-208ENST00000559604 SPRR1AP35321 89 aa11□□□□□ -0.65
KNSTRN-208ENST00000559604 TSPEAR-AS2P59090 65 aa11□□□□□ -0.65
KNSTRN-208ENST00000559604 MYMXA0A1B0GTQ4 84 aa10.99□□□□□ -0.65
KNSTRN-208ENST00000559604 KCNQ1DNQ9H478 68 aa10.99□□□□□ -0.65
KNSTRN-208ENST00000559604 LINC00587B1AMM8 73 aa10.98□□□□□ -0.65
KNSTRN-208ENST00000559604 KRTAP4-16G5E9R7 235 aaPredicted RBP10.98□□□□□ -0.65
KNSTRN-208ENST00000559604 SERF1AO75920 110 aa10.98□□□□□ -0.65
KNSTRN-208ENST00000559604 LEPROTL1O95214 131 aa10.98□□□□□ -0.65
KNSTRN-208ENST00000559604 LINC00337Q8N6G1 96 aa10.98□□□□□ -0.65
KNSTRN-208ENST00000559604 TRBV10-3A0A0K0K1G6 114 aa10.96□□□□□ -0.65
KNSTRN-208ENST00000559604 LEPROTO15243 131 aa10.96□□□□□ -0.65
KNSTRN-208ENST00000559604 SNRPEP62304 92 aaKnown RBP10.96□□□□□ -0.65
KNSTRN-208ENST00000559604 MAP1LC3CQ9BXW4 147 aa10.96□□□□□ -0.65
KNSTRN-208ENST00000559604 ZNF706Q9Y5V0 76 aaPredicted RBP10.96□□□□□ -0.65
KNSTRN-208ENST00000559604 PCP4L1A6NKN8 68 aa10.95□□□□□ -0.66
KNSTRN-208ENST00000559604 DAND5Q8N907 189 aa10.95□□□□□ -0.66
KNSTRN-208ENST00000559604 FAT4Q6V0I7 4981 aa10.94□□□□□ -0.66
KNSTRN-208ENST00000559604 IGLV7-46A0A075B6I9 117 aa10.94□□□□□ -0.66
KNSTRN-208ENST00000559604 PLNP26678 52 aa10.94□□□□□ -0.66
KNSTRN-208ENST00000559604 TPRXLQ17RH7 258 aa10.94□□□□□ -0.66
KNSTRN-208ENST00000559604 SMCR5Q8TEV8 140 aa10.94□□□□□ -0.66
KNSTRN-208ENST00000559604 LOC107984156A0A0G2JMH3 177 aa10.93□□□□□ -0.66
KNSTRN-208ENST00000559604 ETDCA0A1B0GVM5 59 aa10.93□□□□□ -0.66
KNSTRN-208ENST00000559604 ARL17AQ8IVW1 177 aa10.93□□□□□ -0.66
KNSTRN-208ENST00000559604 FABP4P15090 132 aa10.92□□□□□ -0.66
KNSTRN-208ENST00000559604 SPAG11AQ6PDA7 123 aa10.92□□□□□ -0.66
KNSTRN-208ENST00000559604 PMCHL2Q9BQD1 86 aa10.92□□□□□ -0.66
KNSTRN-208ENST00000559604 J3QQQ9 107 aa10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 HIST1H2BKO60814 126 aa10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 DPM2O94777 84 aa10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 HIST1H2BJP06899 126 aa10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 HIST1H2BOP23527 126 aa10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 HIST1H2BBP33778 126 aa10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 HIST1H2BDP58876 126 aa10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 HIST1H2BCP62807 126 aa10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 HIST2H2BEQ16778 126 aa10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 HIST1H2BHQ93079 126 aa10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 HIST1H2BNQ99877 126 aa10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 HIST1H2BMQ99879 126 aa10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 PPDPFQ9H3Y8 114 aa10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 HSPB8Q9UJY1 196 aa10.91□□□□□ -0.66
KNSTRN-208ENST00000559604 CDIP1Q9H305 208 aa10.9□□□□□ -0.66
KNSTRN-208ENST00000559604 A0A0U1RQV1 116 aa10.89□□□□□ -0.67
KNSTRN-208ENST00000559604 B5MCH6 92 aa10.89□□□□□ -0.67
KNSTRN-208ENST00000559604 TRBV10-2A0A0K0K1G8 114 aa10.88□□□□□ -0.67
KNSTRN-208ENST00000559604 IGKCP01834 107 aa10.88□□□□□ -0.67
KNSTRN-208ENST00000559604 DDTP30046 118 aa10.88□□□□□ -0.67
KNSTRN-208ENST00000559604 NMUP48645 174 aa10.88□□□□□ -0.67
KNSTRN-208ENST00000559604 HERVK_113P61574 105 aa10.88□□□□□ -0.67
KNSTRN-208ENST00000559604 LINC00483Q53H64 154 aa10.88□□□□□ -0.67
KNSTRN-208ENST00000559604 Q8NBF4 154 aa10.88□□□□□ -0.67
KNSTRN-208ENST00000559604 S100A2P29034 98 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms