RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 SETBP1Q9Y6X0 1596 aa-1.55□□□□□ -2.66
CASC4-210ENST00000559550 LCN9Q8WX39 176 aa-1.55□□□□□ -2.66
CASC4-210ENST00000559550 MT1LQ93083 61 aa-1.55□□□□□ -2.66
CASC4-210ENST00000559550 USMG5Q96IX5 58 aa-1.55□□□□□ -2.66
CASC4-210ENST00000559550 TET3O43151 1660 aa-1.55□□□□□ -2.66
CASC4-210ENST00000559550 MBD5Q9P267 1494 aa-1.56□□□□□ -2.66
CASC4-210ENST00000559550 PHLPP1O60346 1717 aa-1.56□□□□□ -2.66
CASC4-210ENST00000559550 CPSF4LA6NMK7 179 aaKnown RBP-1.56□□□□□ -2.66
CASC4-210ENST00000559550 MT1EP04732 61 aa-1.56□□□□□ -2.66
CASC4-210ENST00000559550 BTG2P78543 158 aa-1.56□□□□□ -2.66
CASC4-210ENST00000559550 C8orf59Q8N0T1 100 aaPredicted RBP-1.56□□□□□ -2.66
CASC4-210ENST00000559550 S4R3F8 94 aa-1.56□□□□□ -2.66
CASC4-210ENST00000559550 SHROOM2Q13796 1616 aa-1.56□□□□□ -2.66
CASC4-210ENST00000559550 SMG6Q86US8 1419 aaKnown RBP-1.57□□□□□ -2.66
CASC4-210ENST00000559550 CRYBG3Q68DQ2 2970 aa-1.57□□□□□ -2.66
CASC4-210ENST00000559550 LOC100130705A0A1B0GUX0 176 aa-1.57□□□□□ -2.66
CASC4-210ENST00000559550 K7EP34 96 aa-1.57□□□□□ -2.66
CASC4-210ENST00000559550 APOC2P02655 101 aa-1.57□□□□□ -2.66
CASC4-210ENST00000559550 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.57□□□□□ -2.66
CASC4-210ENST00000559550 CSMD2Q7Z408 3487 aa-1.57□□□□□ -2.66
CASC4-210ENST00000559550 ADAMTS12P58397 1594 aa-1.57□□□□□ -2.66
CASC4-210ENST00000559550 SPEGQ15772 3267 aa-1.58□□□□□ -2.66
CASC4-210ENST00000559550 CDC42BPGQ6DT37 1551 aa-1.58□□□□□ -2.66
CASC4-210ENST00000559550 WHAMMP3Q1A5X7 153 aa-1.58□□□□□ -2.66
CASC4-210ENST00000559550 FAM167A-AS1Q96KT0 104 aa-1.58□□□□□ -2.66
CASC4-210ENST00000559550 UQCR10Q9UDW1 63 aa-1.58□□□□□ -2.66
CASC4-210ENST00000559550 FMN2Q9NZ56 1722 aa-1.58□□□□□ -2.66
CASC4-210ENST00000559550 OOSP1A8MZH6 123 aa-1.59□□□□□ -2.66
CASC4-210ENST00000559550 IFNGP01579 166 aa-1.59□□□□□ -2.66
CASC4-210ENST00000559550 DEFB110Q30KQ9 67 aa-1.59□□□□□ -2.66
CASC4-210ENST00000559550 WFDC9Q8NEX5 89 aa-1.59□□□□□ -2.66
CASC4-210ENST00000559550 ROBO1Q9Y6N7 1651 aa-1.59□□□□□ -2.66
CASC4-210ENST00000559550 DCHS1Q96JQ0 3298 aa-1.59□□□□□ -2.66
CASC4-210ENST00000559550 C1orf167Q5SNV9 1468 aa-1.6□□□□□ -2.67
CASC4-210ENST00000559550 FOCADQ5VW36 1801 aa-1.6□□□□□ -2.67
CASC4-210ENST00000559550 H1FX-AS1Q4G0G2 97 aa-1.6□□□□□ -2.67
CASC4-210ENST00000559550 PTPN23Q9H3S7 1636 aa-1.6□□□□□ -2.67
CASC4-210ENST00000559550 ANKRD50Q9ULJ7 1429 aa-1.6□□□□□ -2.67
CASC4-210ENST00000559550 SLIT1O75093 1534 aa-1.61□□□□□ -2.67
CASC4-210ENST00000559550 MYH7P12883 1935 aa-1.61□□□□□ -2.67
CASC4-210ENST00000559550 PRO1933Q9H354 126 aa-1.62□□□□□ -2.67
CASC4-210ENST00000559550 CRIPTQ9P021 101 aa-1.62□□□□□ -2.67
CASC4-210ENST00000559550 EHBP1L1Q8N3D4 1523 aa-1.62□□□□□ -2.67
CASC4-210ENST00000559550 H0YGG7 62 aa-1.63□□□□□ -2.67
CASC4-210ENST00000559550 NDUFA2O43678 99 aa-1.63□□□□□ -2.67
CASC4-210ENST00000559550 SFTA2Q6UW10 78 aa-1.63□□□□□ -2.67
CASC4-210ENST00000559550 BCORQ6W2J9 1755 aa-1.63□□□□□ -2.67
CASC4-210ENST00000559550 PAPPA2Q9BXP8 1791 aa-1.63□□□□□ -2.67
CASC4-210ENST00000559550 FGF7P21781 194 aa-1.64□□□□□ -2.67
CASC4-210ENST00000559550 KRTAP8-1Q8IUC2 63 aa-1.64□□□□□ -2.67
CASC4-210ENST00000559550 C9orf62Q8N4C0 152 aa-1.64□□□□□ -2.67
CASC4-210ENST00000559550 CEP350Q5VT06 3117 aa-1.64□□□□□ -2.67
CASC4-210ENST00000559550 ADGRL2O95490 1459 aa-1.64□□□□□ -2.67
CASC4-210ENST00000559550 QRICH2Q9H0J4 1663 aa-1.64□□□□□ -2.67
CASC4-210ENST00000559550 WDFY3Q8IZQ1 3526 aa-1.65□□□□□ -2.67
CASC4-210ENST00000559550 NAIPQ13075 1403 aa-1.66□□□□□ -2.67
CASC4-210ENST00000559550 CFAP54Q96N23 3096 aa-1.66□□□□□ -2.67
CASC4-210ENST00000559550 SCN7AQ01118 1682 aa-1.66□□□□□ -2.68
CASC4-210ENST00000559550 UBE2L5PA0A1B0GUS4 154 aa-1.66□□□□□ -2.68
CASC4-210ENST00000559550 A0A1B0GWA3 101 aa-1.66□□□□□ -2.68
CASC4-210ENST00000559550 FAM223BA6NKX1 122 aa-1.66□□□□□ -2.68
CASC4-210ENST00000559550 GNG11P61952 73 aa-1.66□□□□□ -2.68
CASC4-210ENST00000559550 UBE2L3P68036 154 aaKnown RBP-1.66□□□□□ -2.68
CASC4-210ENST00000559550 CCDC58Q4VC31 144 aa-1.66□□□□□ -2.68
CASC4-210ENST00000559550 MANBALQ9NQG1 85 aa-1.66□□□□□ -2.68
CASC4-210ENST00000559550 NLRP1Q9C000 1473 aa-1.67□□□□□ -2.68
CASC4-210ENST00000559550 FRYLO94915 3013 aa-1.67□□□□□ -2.68
CASC4-210ENST00000559550 DEFB4AO15263 64 aa-1.67□□□□□ -2.68
CASC4-210ENST00000559550 ASIPP42127 132 aa-1.67□□□□□ -2.68
CASC4-210ENST00000559550 SEC11AP67812 179 aa-1.67□□□□□ -2.68
CASC4-210ENST00000559550 DPH3P1Q9H4G8 78 aa-1.67□□□□□ -2.68
CASC4-210ENST00000559550 A0A0G2JMZ2 1700 aa-1.67□□□□□ -2.68
CASC4-210ENST00000559550 XRN1Q8IZH2 1706 aaKnown RBP-1.67□□□□□ -2.68
CASC4-210ENST00000559550 MAP3K1Q13233 1512 aa-1.67□□□□□ -2.68
CASC4-210ENST00000559550 WDFY4Q6ZS81 3184 aa-1.67□□□□□ -2.68
CASC4-210ENST00000559550 NKTRP30414 1462 aaKnown RBP-1.68□□□□□ -2.68
CASC4-210ENST00000559550 C9orf92A6NGG3 77 aa-1.68□□□□□ -2.68
CASC4-210ENST00000559550 MT1FP04733 61 aa-1.68□□□□□ -2.68
CASC4-210ENST00000559550 AKAIN1P0CW23 69 aa-1.68□□□□□ -2.68
CASC4-210ENST00000559550 UBE2D3P61077 147 aa-1.68□□□□□ -2.68
CASC4-210ENST00000559550 UBE2D2P62837 147 aa-1.68□□□□□ -2.68
CASC4-210ENST00000559550 Q0VG73 95 aa-1.68□□□□□ -2.68
CASC4-210ENST00000559550 C9orf153Q5TBE3 101 aa-1.68□□□□□ -2.68
CASC4-210ENST00000559550 EP400Q96L91 3159 aa-1.68□□□□□ -2.68
CASC4-210ENST00000559550 A2ML1A8K2U0 1454 aa-1.69□□□□□ -2.68
CASC4-210ENST00000559550 PLEKHH2Q8IVE3 1493 aa-1.69□□□□□ -2.68
CASC4-210ENST00000559550 KTN1Q86UP2 1357 aaKnown RBP-1.69□□□□□ -2.68
CASC4-210ENST00000559550 LELP1Q5T871 98 aa-1.69□□□□□ -2.68
CASC4-210ENST00000559550 TCHHQ07283 1943 aa-1.7□□□□□ -2.68
CASC4-210ENST00000559550 TRAPPC2P0DI81 140 aa-1.7□□□□□ -2.68
CASC4-210ENST00000559550 TRAPPC2BP0DI82 140 aa-1.7□□□□□ -2.68
CASC4-210ENST00000559550 F6UZH7 168 aa-1.71□□□□□ -2.68
CASC4-210ENST00000559550 K7EP13 123 aa-1.71□□□□□ -2.68
CASC4-210ENST00000559550 PP6455Q8WZ26 134 aa-1.71□□□□□ -2.68
CASC4-210ENST00000559550 CDC42BPAQ5VT25 1732 aa-1.71□□□□□ -2.68
CASC4-210ENST00000559550 MARF1Q9Y4F3 1742 aaKnown RBP-1.71□□□□□ -2.68
CASC4-210ENST00000559550 SCAPERQ9BY12 1400 aa-1.72□□□□□ -2.68
CASC4-210ENST00000559550 A0A1B0GU69 56 aa-1.72□□□□□ -2.68
CASC4-210ENST00000559550 COX6CP09669 75 aa-1.72□□□□□ -2.68
CASC4-210ENST00000559550 LINC00846Q9NV44 126 aa-1.72□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms