RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 MYMXA0A1B0GTQ4 84 aa2.68□□□□□ -1.98
SNX1-205ENST00000559339 ZNF861PO60384 105 aa2.68□□□□□ -1.98
SNX1-205ENST00000559339 DPM2O94777 84 aa2.68□□□□□ -1.98
SNX1-205ENST00000559339 IGKCP01834 107 aa2.68□□□□□ -1.98
SNX1-205ENST00000559339 RPL28P46779 137 aaKnown RBP2.68□□□□□ -1.98
SNX1-205ENST00000559339 KRTAP7-1Q8IUC3 87 aa2.68□□□□□ -1.98
SNX1-205ENST00000559339 SND1-IT1Q9HBX3 110 aa2.68□□□□□ -1.98
SNX1-205ENST00000559339 IGLV5-37A0A075B6J1 123 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 A0A0U1RRA0 63 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 GAGE10A6NGK3 116 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 RPL37AP8A6NKH3 93 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 H0Y9J4 135 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 BCE1O60756 84 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 HIST1H2BKO60814 126 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 SCO1O75880 301 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 HIST1H2BJP06899 126 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 LGALS3P17931 250 aaKnown RBP2.67□□□□□ -1.98
SNX1-205ENST00000559339 HIST1H2BOP23527 126 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 HIST1H2BBP33778 126 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 NMUP48645 174 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 UBE2AP49459 152 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 HIST1H2BDP58876 126 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 LINC00310P59036 64 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 HIST1H2BCP62807 126 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 S100A12P80511 92 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 HIST2H2BEQ16778 126 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.67□□□□□ -1.98
SNX1-205ENST00000559339 HIST1H2BHQ93079 126 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 PLEKHB2Q96CS7 222 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 LINC00167Q96N53 147 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 HIST1H2BNQ99877 126 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 HIST1H2BMQ99879 126 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 MIEN1Q9BRT3 115 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 NDUFA12Q9UI09 145 aa2.67□□□□□ -1.98
SNX1-205ENST00000559339 IGKV2-28A0A075B6P5 120 aa2.66□□□□□ -1.98
SNX1-205ENST00000559339 SYS1-DBNDD2H3BUS1 97 aa2.66□□□□□ -1.98
SNX1-205ENST00000559339 J3QQQ9 107 aa2.66□□□□□ -1.98
SNX1-205ENST00000559339 LEPROTO15243 131 aa2.66□□□□□ -1.98
SNX1-205ENST00000559339 IGKV2D-28P01615 120 aa2.66□□□□□ -1.98
SNX1-205ENST00000559339 MT1HL1P0DM35 61 aa2.66□□□□□ -1.98
SNX1-205ENST00000559339 RPL13AP40429 203 aaKnown RBP2.66□□□□□ -1.98
SNX1-205ENST00000559339 KRTAP11-1Q8IUC1 163 aa2.66□□□□□ -1.98
SNX1-205ENST00000559339 PMCHL2Q9BQD1 86 aa2.66□□□□□ -1.98
SNX1-205ENST00000559339 IGLV1-50A0A075B6I6 118 aa2.65□□□□□ -1.99
SNX1-205ENST00000559339 IGKV2D-26A0A0A0MRZ7 120 aa2.65□□□□□ -1.99
SNX1-205ENST00000559339 C20orf202A1L168 122 aa2.65□□□□□ -1.99
SNX1-205ENST00000559339 M0R378 163 aa2.65□□□□□ -1.99
SNX1-205ENST00000559339 SMIM13P0DJ93 91 aa2.65□□□□□ -1.99
SNX1-205ENST00000559339 VPREB1P12018 145 aa2.65□□□□□ -1.99
SNX1-205ENST00000559339 S100A1P23297 94 aa2.65□□□□□ -1.99
SNX1-205ENST00000559339 AKR1D1P51857 326 aa2.65□□□□□ -1.99
SNX1-205ENST00000559339 KRTAP10-8P60410 259 aa2.65□□□□□ -1.99
SNX1-205ENST00000559339 BOD1L2Q8IYS8 172 aa2.65□□□□□ -1.99
SNX1-205ENST00000559339 MIR7-3HGQ8N6C7 128 aa2.65□□□□□ -1.99
SNX1-205ENST00000559339 DNAH8Q96JB1 4490 aa2.65□□□□□ -1.99
SNX1-205ENST00000559339 E9PLD3 99 aa2.64□□□□□ -1.99
SNX1-205ENST00000559339 CRYGAP11844 174 aa2.64□□□□□ -1.99
SNX1-205ENST00000559339 KRTDAPP60985 99 aa2.64□□□□□ -1.99
SNX1-205ENST00000559339 PET117Q6UWS5 81 aa2.64□□□□□ -1.99
SNX1-205ENST00000559339 FAM19A1Q7Z5A9 133 aa2.64□□□□□ -1.99
SNX1-205ENST00000559339 PRR26Q8N8Z3 221 aa2.64□□□□□ -1.99
SNX1-205ENST00000559339 TMEM126AQ9H061 195 aa2.64□□□□□ -1.99
SNX1-205ENST00000559339 TMEM238C9JI98 176 aa2.63□□□□□ -1.99
SNX1-205ENST00000559339 S100A6P06703 90 aa2.63□□□□□ -1.99
SNX1-205ENST00000559339 S100A2P29034 98 aa2.63□□□□□ -1.99
SNX1-205ENST00000559339 TSPEAR-AS2P59090 65 aa2.63□□□□□ -1.99
SNX1-205ENST00000559339 PRLHP81277 87 aa2.63□□□□□ -1.99
SNX1-205ENST00000559339 COA6Q5JTJ3 125 aaKnown RBP2.63□□□□□ -1.99
SNX1-205ENST00000559339 S100A7L2Q5SY68 101 aa2.63□□□□□ -1.99
SNX1-205ENST00000559339 LINC01545Q5VT33 79 aa2.63□□□□□ -1.99
SNX1-205ENST00000559339 DAND5Q8N907 189 aa2.63□□□□□ -1.99
SNX1-205ENST00000559339 CBY1Q9Y3M2 126 aa2.63□□□□□ -1.99
SNX1-205ENST00000559339 HERC1Q15751 4861 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 LOC107984156A0A0G2JMH3 177 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 TRBV10-2A0A0K0K1G8 114 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 ETDCA0A1B0GVM5 59 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 PRYO14603 147 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 NCR3O14931 201 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 NDUFC2O95298 119 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 KRTAP1-4P0C5Y4 121 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 C3orf79P0CE67 100 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 HINT1P49773 126 aaPredicted RBP2.62□□□□□ -1.99
SNX1-205ENST00000559339 SCGB1D4Q6XE38 83 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 ARL17AQ8IVW1 177 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 TYMSOSQ8TAI1 123 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 COPS9Q8WXC6 57 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 HIGD2AQ9BW72 106 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 KCNQ1DNQ9H478 68 aa2.62□□□□□ -1.99
SNX1-205ENST00000559339 SPANXB1Q9NS25 103 aaPredicted RBP2.62□□□□□ -1.99
SNX1-205ENST00000559339 ZNF706Q9Y5V0 76 aaPredicted RBP2.62□□□□□ -1.99
SNX1-205ENST00000559339 A0A0J9YXY3 114 aa2.61□□□□□ -1.99
SNX1-205ENST00000559339 TRBV10-3A0A0K0K1G6 114 aa2.61□□□□□ -1.99
SNX1-205ENST00000559339 ZNF815PA8K554 130 aa2.61□□□□□ -1.99
SNX1-205ENST00000559339 HSBP1L1C9JCN9 74 aa2.61□□□□□ -1.99
SNX1-205ENST00000559339 TIMM17BO60830 172 aa2.61□□□□□ -1.99
SNX1-205ENST00000559339 DDTP30046 118 aa2.61□□□□□ -1.99
SNX1-205ENST00000559339 SNRPEP62304 92 aaKnown RBP2.61□□□□□ -1.99
SNX1-205ENST00000559339 JOSD1Q15040 202 aaPredicted RBP2.61□□□□□ -1.99
SNX1-205ENST00000559339 FAM229BQ4G0N7 80 aa2.61□□□□□ -1.99
SNX1-205ENST00000559339 KRTAP13-1Q8IUC0 172 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms