RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 SND1-IT1Q9HBX3 110 aa5.23□□□□□ -1.57
LRRC28-211ENST00000558890 C6orf226Q5I0X4 101 aa5.22□□□□□ -1.57
LRRC28-211ENST00000558890 CFAP161Q6P656 301 aa5.22□□□□□ -1.57
LRRC28-211ENST00000558890 CLPSL2Q6UWE3 100 aa5.22□□□□□ -1.57
LRRC28-211ENST00000558890 LYPD5Q6UWN5 251 aa5.22□□□□□ -1.57
LRRC28-211ENST00000558890 Q8IZM0 81 aa5.22□□□□□ -1.57
LRRC28-211ENST00000558890 NTN5Q8WTR8 489 aaPredicted RBP5.22□□□□□ -1.57
LRRC28-211ENST00000558890 CLEC2BQ92478 149 aa5.22□□□□□ -1.57
LRRC28-211ENST00000558890 CARD19Q96LW7 228 aa5.22□□□□□ -1.57
LRRC28-211ENST00000558890 ANGP03950 147 aaKnown RBP5.21□□□□□ -1.58
LRRC28-211ENST00000558890 MALP21145 153 aa5.21□□□□□ -1.58
LRRC28-211ENST00000558890 CD164L2Q6UWJ8 174 aa5.21□□□□□ -1.58
LRRC28-211ENST00000558890 LINC00476Q8WZB0 136 aa5.21□□□□□ -1.58
LRRC28-211ENST00000558890 HECTD4Q9Y4D8 3996 aa5.21□□□□□ -1.58
LRRC28-211ENST00000558890 TRAV8-4A0A0B4J246 113 aa5.2□□□□□ -1.58
LRRC28-211ENST00000558890 TRACP01848 142 aa5.2□□□□□ -1.58
LRRC28-211ENST00000558890 PFN2P35080 140 aa5.2□□□□□ -1.58
LRRC28-211ENST00000558890 CKS1BP61024 79 aa5.2□□□□□ -1.58
LRRC28-211ENST00000558890 REG3AQ06141 175 aa5.2□□□□□ -1.58
LRRC28-211ENST00000558890 TTC32Q5I0X7 151 aa5.2□□□□□ -1.58
LRRC28-211ENST00000558890 LINC01556Q5JQF7 62 aa5.2□□□□□ -1.58
LRRC28-211ENST00000558890 LINC00269Q8N2A0 174 aa5.2□□□□□ -1.58
LRRC28-211ENST00000558890 CHCHD10Q8WYQ3 142 aaPredicted RBP5.2□□□□□ -1.58
LRRC28-211ENST00000558890 DNAH10OSP0CZ25 163 aa5.19□□□□□ -1.58
LRRC28-211ENST00000558890 RPL28P46779 137 aaKnown RBP5.19□□□□□ -1.58
LRRC28-211ENST00000558890 ESRGQ1W209 222 aa5.19□□□□□ -1.58
LRRC28-211ENST00000558890 LINC00588Q9Y4M8 146 aa5.19□□□□□ -1.58
LRRC28-211ENST00000558890 PKD1P98161 4303 aa5.19□□□□□ -1.58
LRRC28-211ENST00000558890 CDIP1Q9H305 208 aa5.18□□□□□ -1.58
LRRC28-211ENST00000558890 BIRC6Q9NR09 4857 aa5.18□□□□□ -1.58
LRRC28-211ENST00000558890 PKHD1P08F94 4074 aa5.18□□□□□ -1.58
LRRC28-211ENST00000558890 DYNC1H1Q14204 4646 aaKnown RBP5.17□□□□□ -1.58
LRRC28-211ENST00000558890 H0YGX0 51 aa5.17□□□□□ -1.58
LRRC28-211ENST00000558890 DNAL4O96015 105 aa5.17□□□□□ -1.58
LRRC28-211ENST00000558890 COX17Q14061 63 aa5.17□□□□□ -1.58
LRRC28-211ENST00000558890 UBE2DNLQ8IWF7 75 aa5.17□□□□□ -1.58
LRRC28-211ENST00000558890 OR13C6PQ8NH95 151 aa5.17□□□□□ -1.58
LRRC28-211ENST00000558890 IGLV10-54A0A075B6I4 117 aa5.16□□□□□ -1.58
LRRC28-211ENST00000558890 IGKV2-28A0A075B6P5 120 aa5.16□□□□□ -1.58
LRRC28-211ENST00000558890 IGKV2D-28P01615 120 aa5.16□□□□□ -1.58
LRRC28-211ENST00000558890 SPAG11BQ08648 103 aa5.16□□□□□ -1.58
LRRC28-211ENST00000558890 LINC00337Q8N6G1 96 aa5.16□□□□□ -1.58
LRRC28-211ENST00000558890 PRR34Q9NV39 138 aa5.16□□□□□ -1.58
LRRC28-211ENST00000558890 TEX49A0A1B0GTD5 131 aa5.15□□□□□ -1.59
LRRC28-211ENST00000558890 FAM240AA0A1B0GVK7 77 aa5.15□□□□□ -1.59
LRRC28-211ENST00000558890 LY6G6CO95867 125 aa5.15□□□□□ -1.59
LRRC28-211ENST00000558890 SMIM11BQ8TCY0 68 aa5.15□□□□□ -1.59
LRRC28-211ENST00000558890 DNAH5Q8TE73 4624 aa5.15□□□□□ -1.59
LRRC28-211ENST00000558890 SNCGO76070 127 aa5.14□□□□□ -1.59
LRRC28-211ENST00000558890 NDUFC2O95298 119 aa5.14□□□□□ -1.59
LRRC28-211ENST00000558890 MT-ATP8P03928 68 aa5.14□□□□□ -1.59
LRRC28-211ENST00000558890 BAALC-AS2P0C853 105 aa5.14□□□□□ -1.59
LRRC28-211ENST00000558890 INAFM2P0DMQ5 153 aa5.14□□□□□ -1.59
LRRC28-211ENST00000558890 XGP55808 180 aa5.14□□□□□ -1.59
LRRC28-211ENST00000558890 KIAA0087Q14695 138 aa5.14□□□□□ -1.59
LRRC28-211ENST00000558890 Q6ZR54 194 aa5.14□□□□□ -1.59
LRRC28-211ENST00000558890 WFDC10BQ8IUB3 73 aa5.14□□□□□ -1.59
LRRC28-211ENST00000558890 Q8N3U1 123 aa5.14□□□□□ -1.59
LRRC28-211ENST00000558890 KLK12Q9UKR0 248 aa5.14□□□□□ -1.59
LRRC28-211ENST00000558890 LRP1BQ9NZR2 4599 aa5.13□□□□□ -1.59
LRRC28-211ENST00000558890 NBDYA0A0U1RRE5 68 aa5.13□□□□□ -1.59
LRRC28-211ENST00000558890 ACYP1P07311 99 aa5.13□□□□□ -1.59
LRRC28-211ENST00000558890 RMI2Q96E14 147 aa5.13□□□□□ -1.59
LRRC28-211ENST00000558890 A0A1B0GV72 72 aa5.12□□□□□ -1.59
LRRC28-211ENST00000558890 FAM218AQ96MZ4 157 aa5.12□□□□□ -1.59
LRRC28-211ENST00000558890 TMEM126AQ9H061 195 aa5.12□□□□□ -1.59
LRRC28-211ENST00000558890 A0A1B0GX51 115 aa5.11□□□□□ -1.59
LRRC28-211ENST00000558890 S100A7L2Q5SY68 101 aa5.11□□□□□ -1.59
LRRC28-211ENST00000558890 Q9HAA7 133 aa5.11□□□□□ -1.59
LRRC28-211ENST00000558890 A0A087WYN8 130 aa5.1□□□□□ -1.59
LRRC28-211ENST00000558890 GVQW2A0A096LPI5 108 aaPredicted RBP5.1□□□□□ -1.59
LRRC28-211ENST00000558890 LECT2O14960 151 aa5.1□□□□□ -1.59
LRRC28-211ENST00000558890 GAGE2BQ13066 116 aa5.1□□□□□ -1.59
LRRC28-211ENST00000558890 GAGE2EQ4V326 116 aa5.1□□□□□ -1.59
LRRC28-211ENST00000558890 ENHOQ6UWT2 76 aa5.1□□□□□ -1.59
LRRC28-211ENST00000558890 ORMDL1Q9P0S3 153 aa5.1□□□□□ -1.59
LRRC28-211ENST00000558890 GAGE2DQ9UEU5 116 aa5.1□□□□□ -1.59
LRRC28-211ENST00000558890 DNAH8Q96JB1 4490 aa5.09□□□□□ -1.59
LRRC28-211ENST00000558890 ZNF561-AS1K7EIQ3 104 aa5.09□□□□□ -1.59
LRRC28-211ENST00000558890 NCR3O14931 201 aa5.09□□□□□ -1.59
LRRC28-211ENST00000558890 RTL8CO15255 209 aa5.09□□□□□ -1.59
LRRC28-211ENST00000558890 UNQ6190/PRO20217Q6UXQ8 127 aa5.09□□□□□ -1.59
LRRC28-211ENST00000558890 KRTAP1-5Q9BYS1 174 aa5.09□□□□□ -1.59
LRRC28-211ENST00000558890 C9orf116Q5BN46 136 aaPredicted RBP5.08□□□□□ -1.6
LRRC28-211ENST00000558890 Q6Q795 121 aa5.08□□□□□ -1.6
LRRC28-211ENST00000558890 C6orf223Q8N319 242 aa5.08□□□□□ -1.6
LRRC28-211ENST00000558890 C1orf43Q9BWL3 253 aa5.08□□□□□ -1.6
LRRC28-211ENST00000558890 F8WDY8 70 aa5.07□□□□□ -1.6
LRRC28-211ENST00000558890 C10orf25Q5T742 122 aa5.07□□□□□ -1.6
LRRC28-211ENST00000558890 Q6ZRN7 208 aaPredicted RBP5.07□□□□□ -1.6
LRRC28-211ENST00000558890 CAMK2N2Q96S95 79 aa5.07□□□□□ -1.6
LRRC28-211ENST00000558890 C6orf48Q9UBA6 75 aa5.07□□□□□ -1.6
LRRC28-211ENST00000558890 C6orf99Q4VX62 202 aa5.06□□□□□ -1.6
LRRC28-211ENST00000558890 C1orf134Q5TEV5 83 aa5.06□□□□□ -1.6
LRRC28-211ENST00000558890 GAGE2AQ6NT46 116 aa5.06□□□□□ -1.6
LRRC28-211ENST00000558890 LINC00336Q6ZUF6 198 aa5.06□□□□□ -1.6
LRRC28-211ENST00000558890 LINC00643Q86TS7 51 aa5.06□□□□□ -1.6
LRRC28-211ENST00000558890 C2orf48Q96LS8 159 aa5.06□□□□□ -1.6
LRRC28-211ENST00000558890 LINC00167Q96N53 147 aa5.06□□□□□ -1.6
LRRC28-211ENST00000558890 ANAPC13Q9BS18 74 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms