RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 NDUFA1O15239 70 aa4.59□□□□□ -1.67
TRAF3-206ENST00000558880 IGKV2-30P06310 120 aa4.59□□□□□ -1.67
TRAF3-206ENST00000558880 TLX1NBP0CAT3 122 aa4.59□□□□□ -1.67
TRAF3-206ENST00000558880 CHTF8P0CG12 524 aa4.59□□□□□ -1.67
TRAF3-206ENST00000558880 Q8NDZ9 215 aa4.59□□□□□ -1.67
TRAF3-206ENST00000558880 CARD19Q96LW7 228 aa4.59□□□□□ -1.67
TRAF3-206ENST00000558880 CAMK2N2Q96S95 79 aa4.59□□□□□ -1.67
TRAF3-206ENST00000558880 A0A096LNI7 61 aa4.58□□□□□ -1.68
TRAF3-206ENST00000558880 TRBV30A0A0K0K1B3 111 aa4.58□□□□□ -1.68
TRAF3-206ENST00000558880 C20orf202A1L168 122 aa4.58□□□□□ -1.68
TRAF3-206ENST00000558880 SCGB1D1O95968 90 aa4.58□□□□□ -1.68
TRAF3-206ENST00000558880 XGP55808 180 aa4.58□□□□□ -1.68
TRAF3-206ENST00000558880 C6orf226Q5I0X4 101 aa4.58□□□□□ -1.68
TRAF3-206ENST00000558880 C9orf129Q5T035 196 aaKnown RBP4.58□□□□□ -1.68
TRAF3-206ENST00000558880 PLEKHB2Q96CS7 222 aa4.58□□□□□ -1.68
TRAF3-206ENST00000558880 A0A0J9YXY3 114 aa4.57□□□□□ -1.68
TRAF3-206ENST00000558880 A0A1W2PNN7 141 aa4.57□□□□□ -1.68
TRAF3-206ENST00000558880 CXCL5P42830 114 aa4.57□□□□□ -1.68
TRAF3-206ENST00000558880 ADAMTSL4-AS1Q5T5F5 129 aa4.57□□□□□ -1.68
TRAF3-206ENST00000558880 Q5VSD8 79 aa4.57□□□□□ -1.68
TRAF3-206ENST00000558880 NDUFA12Q9UI09 145 aa4.57□□□□□ -1.68
TRAF3-206ENST00000558880 PRSS2P07478 247 aa4.56□□□□□ -1.68
TRAF3-206ENST00000558880 HAMPP81172 84 aa4.56□□□□□ -1.68
TRAF3-206ENST00000558880 SOSTDC1Q6X4U4 206 aa4.56□□□□□ -1.68
TRAF3-206ENST00000558880 Q8N9P0 234 aaPredicted RBP4.56□□□□□ -1.68
TRAF3-206ENST00000558880 SPACA4Q8TDM5 124 aa4.56□□□□□ -1.68
TRAF3-206ENST00000558880 FAM168BA1KXE4 195 aa4.55□□□□□ -1.68
TRAF3-206ENST00000558880 NDUFC2-KCTD14E9PQ53 114 aa4.55□□□□□ -1.68
TRAF3-206ENST00000558880 PRYO14603 147 aa4.55□□□□□ -1.68
TRAF3-206ENST00000558880 SMIM13P0DJ93 91 aa4.55□□□□□ -1.68
TRAF3-206ENST00000558880 AKR1D1P51857 326 aa4.55□□□□□ -1.68
TRAF3-206ENST00000558880 CKS1BP61024 79 aa4.55□□□□□ -1.68
TRAF3-206ENST00000558880 HERVK_113P61574 105 aa4.55□□□□□ -1.68
TRAF3-206ENST00000558880 KRTAP11-1Q8IUC1 163 aa4.55□□□□□ -1.68
TRAF3-206ENST00000558880 BOD1L2Q8IYS8 172 aa4.55□□□□□ -1.68
TRAF3-206ENST00000558880 ERG28Q9UKR5 140 aa4.55□□□□□ -1.68
TRAF3-206ENST00000558880 FLG2Q5D862 2391 aaPredicted RBP4.55□□□□□ -1.68
TRAF3-206ENST00000558880 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.54□□□□□ -1.68
TRAF3-206ENST00000558880 LOC107984156A0A0G2JMH3 177 aa4.54□□□□□ -1.68
TRAF3-206ENST00000558880 MYMXA0A1B0GTQ4 84 aa4.54□□□□□ -1.68
TRAF3-206ENST00000558880 COX8AP10176 69 aa4.54□□□□□ -1.68
TRAF3-206ENST00000558880 LGALS3P17931 250 aaKnown RBP4.54□□□□□ -1.68
TRAF3-206ENST00000558880 NMUP48645 174 aa4.54□□□□□ -1.68
TRAF3-206ENST00000558880 SERTAD4-AS1Q5TG53 156 aa4.54□□□□□ -1.68
TRAF3-206ENST00000558880 C2orf91Q6ZV80 131 aa4.54□□□□□ -1.68
TRAF3-206ENST00000558880 SCXQ7RTU7 201 aa4.54□□□□□ -1.68
TRAF3-206ENST00000558880 ARL17AQ8IVW1 177 aa4.54□□□□□ -1.68
TRAF3-206ENST00000558880 DAND5Q8N907 189 aa4.54□□□□□ -1.68
TRAF3-206ENST00000558880 CIRBP-AS1Q8TBR5 109 aa4.54□□□□□ -1.68
TRAF3-206ENST00000558880 XAGE1AQ9HD64 81 aa4.54□□□□□ -1.68
TRAF3-206ENST00000558880 PAM16Q9Y3D7 125 aa4.54□□□□□ -1.68
TRAF3-206ENST00000558880 PKHD1L1Q86WI1 4243 aa4.54□□□□□ -1.68
TRAF3-206ENST00000558880 SRRM2Q9UQ35 2752 aaKnown RBP4.53□□□□□ -1.68
TRAF3-206ENST00000558880 A0A087WYN8 130 aa4.53□□□□□ -1.68
TRAF3-206ENST00000558880 A0A0U1RRA0 63 aa4.53□□□□□ -1.68
TRAF3-206ENST00000558880 LOC107984640A0A0U1RRK4 108 aa4.53□□□□□ -1.68
TRAF3-206ENST00000558880 ZNF815PA8K554 130 aa4.53□□□□□ -1.68
TRAF3-206ENST00000558880 DLEU1O43261 78 aa4.53□□□□□ -1.68
TRAF3-206ENST00000558880 PFN2P35080 140 aa4.53□□□□□ -1.68
TRAF3-206ENST00000558880 HERV-K104P63124 156 aa4.53□□□□□ -1.68
TRAF3-206ENST00000558880 GAGE2BQ13066 116 aa4.53□□□□□ -1.68
TRAF3-206ENST00000558880 SPATA45Q537H7 98 aa4.53□□□□□ -1.68
TRAF3-206ENST00000558880 MIR7-3HGQ8N6C7 128 aa4.53□□□□□ -1.68
TRAF3-206ENST00000558880 C14orf144Q96I85 54 aa4.53□□□□□ -1.68
TRAF3-206ENST00000558880 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
TRAF3-206ENST00000558880 SND1-IT1Q9HBX3 110 aa4.53□□□□□ -1.68
TRAF3-206ENST00000558880 PLAC8Q9NZF1 115 aa4.53□□□□□ -1.68
TRAF3-206ENST00000558880 IGKV2-24A0A0C4DH68 120 aa4.52□□□□□ -1.69
TRAF3-206ENST00000558880 SMR3BP02814 79 aaPredicted RBP4.52□□□□□ -1.69
TRAF3-206ENST00000558880 KRTAP10-4P60372 401 aaPredicted RBP4.52□□□□□ -1.69
TRAF3-206ENST00000558880 RPL18AQ02543 176 aaKnown RBP4.52□□□□□ -1.69
TRAF3-206ENST00000558880 COX17Q14061 63 aa4.52□□□□□ -1.69
TRAF3-206ENST00000558880 GAGE2EQ4V326 116 aa4.52□□□□□ -1.69
TRAF3-206ENST00000558880 VAMP8Q9BV40 100 aa4.52□□□□□ -1.69
TRAF3-206ENST00000558880 GAGE2DQ9UEU5 116 aa4.52□□□□□ -1.69
TRAF3-206ENST00000558880 FAT3Q8TDW7 4589 aa4.51□□□□□ -1.69
TRAF3-206ENST00000558880 TIMM17BO60830 172 aa4.51□□□□□ -1.69
TRAF3-206ENST00000558880 SMIM6P0DI80 62 aa4.51□□□□□ -1.69
TRAF3-206ENST00000558880 VPREB1P12018 145 aa4.51□□□□□ -1.69
TRAF3-206ENST00000558880 SFTA2Q6UW10 78 aa4.51□□□□□ -1.69
TRAF3-206ENST00000558880 LRP1Q07954 4544 aaKnown RBP4.51□□□□□ -1.69
TRAF3-206ENST00000558880 MYCBP2O75592 4640 aa4.5□□□□□ -1.69
TRAF3-206ENST00000558880 IGLV5-37A0A075B6J1 123 aa4.5□□□□□ -1.69
TRAF3-206ENST00000558880 LINC00158P58513 81 aa4.5□□□□□ -1.69
TRAF3-206ENST00000558880 PRR3P79522 188 aaKnown RBP4.5□□□□□ -1.69
TRAF3-206ENST00000558880 LINC00518Q8N0U6 118 aa4.5□□□□□ -1.69
TRAF3-206ENST00000558880 SPANXDQ9BXN6 97 aa4.5□□□□□ -1.69
TRAF3-206ENST00000558880 SPANXCQ9NY87 97 aa4.5□□□□□ -1.69
TRAF3-206ENST00000558880 HSBP1L1C9JCN9 74 aa4.49□□□□□ -1.69
TRAF3-206ENST00000558880 MEIG1Q5JSS6 88 aa4.49□□□□□ -1.69
TRAF3-206ENST00000558880 PHF5AQ7RTV0 110 aaKnown RBP4.49□□□□□ -1.69
TRAF3-206ENST00000558880 LINC00308Q8TCZ7 52 aa4.49□□□□□ -1.69
TRAF3-206ENST00000558880 SPANXB1Q9NS25 103 aaPredicted RBP4.49□□□□□ -1.69
TRAF3-206ENST00000558880 IGKV2-28A0A075B6P5 120 aa4.48□□□□□ -1.69
TRAF3-206ENST00000558880 IGKV2D-28P01615 120 aa4.48□□□□□ -1.69
TRAF3-206ENST00000558880 NPC2P61916 151 aa4.48□□□□□ -1.69
TRAF3-206ENST00000558880 C12orf57Q99622 126 aa4.48□□□□□ -1.69
TRAF3-206ENST00000558880 PRO1933Q9H354 126 aa4.48□□□□□ -1.69
TRAF3-206ENST00000558880 PPDPFQ9H3Y8 114 aa4.48□□□□□ -1.69
TRAF3-206ENST00000558880 C22orf24Q9Y442 160 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms