RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 LINC00310P59036 64 aa10.01□□□□□ -0.81
LRRC28-210ENST00000558879 TMEM238C9JI98 176 aa10□□□□□ -0.81
LRRC28-210ENST00000558879 M0R378 163 aa10□□□□□ -0.81
LRRC28-210ENST00000558879 PRLHP81277 87 aa10□□□□□ -0.81
LRRC28-210ENST00000558879 KRTAP13-2Q52LG2 175 aa10□□□□□ -0.81
LRRC28-210ENST00000558879 FAM19A2Q8N3H0 131 aa10□□□□□ -0.81
LRRC28-210ENST00000558879 TRGC2P03986 189 aa9.99□□□□□ -0.81
LRRC28-210ENST00000558879 FAM229BQ4G0N7 80 aa9.99□□□□□ -0.81
LRRC28-210ENST00000558879 TYMSOSQ8TAI1 123 aa9.99□□□□□ -0.81
LRRC28-210ENST00000558879 FAM19A1Q7Z5A9 133 aa9.98□□□□□ -0.81
LRRC28-210ENST00000558879 ANAPC11Q9NYG5 84 aa9.98□□□□□ -0.81
LRRC28-210ENST00000558879 LINC00158P58513 81 aa9.97□□□□□ -0.81
LRRC28-210ENST00000558879 A0A0U1RRA0 63 aa9.95□□□□□ -0.82
LRRC28-210ENST00000558879 SERF1AO75920 110 aa9.95□□□□□ -0.82
LRRC28-210ENST00000558879 SMIM13P0DJ93 91 aa9.95□□□□□ -0.82
LRRC28-210ENST00000558879 HERV-K104P63124 156 aa9.95□□□□□ -0.82
LRRC28-210ENST00000558879 LEPROTL1O95214 131 aa9.94□□□□□ -0.82
LRRC28-210ENST00000558879 PRR4Q16378 134 aa9.94□□□□□ -0.82
LRRC28-210ENST00000558879 TSPAN13O95857 204 aa9.93□□□□□ -0.82
LRRC28-210ENST00000558879 TSPEAR-AS2P59090 65 aa9.93□□□□□ -0.82
LRRC28-210ENST00000558879 MEIG1Q5JSS6 88 aa9.93□□□□□ -0.82
LRRC28-210ENST00000558879 MIR7-3HGQ8N6C7 128 aa9.93□□□□□ -0.82
LRRC28-210ENST00000558879 NDUFA12Q9UI09 145 aa9.93□□□□□ -0.82
LRRC28-210ENST00000558879 H0Y8G0 127 aa9.92□□□□□ -0.82
LRRC28-210ENST00000558879 PLEKHB2Q96CS7 222 aa9.92□□□□□ -0.82
LRRC28-210ENST00000558879 PRYO14603 147 aa9.91□□□□□ -0.82
LRRC28-210ENST00000558879 IGKV2D-26A0A0A0MRZ7 120 aa9.9□□□□□ -0.82
LRRC28-210ENST00000558879 MYMXA0A1B0GTQ4 84 aa9.9□□□□□ -0.82
LRRC28-210ENST00000558879 LINC00587B1AMM8 73 aa9.9□□□□□ -0.82
LRRC28-210ENST00000558879 PLNP26678 52 aa9.9□□□□□ -0.82
LRRC28-210ENST00000558879 SPRR1AP35321 89 aa9.9□□□□□ -0.82
LRRC28-210ENST00000558879 BOD1L2Q8IYS8 172 aa9.9□□□□□ -0.82
LRRC28-210ENST00000558879 COLCA2A8K830 154 aa9.89□□□□□ -0.83
LRRC28-210ENST00000558879 LEPROTO15243 131 aa9.89□□□□□ -0.83
LRRC28-210ENST00000558879 LINC00304Q8N9R0 145 aa9.89□□□□□ -0.83
LRRC28-210ENST00000558879 KRTAP4-16G5E9R7 235 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-210ENST00000558879 NCR3O14931 201 aa9.88□□□□□ -0.83
LRRC28-210ENST00000558879 ATP6V1G1O75348 118 aa9.88□□□□□ -0.83
LRRC28-210ENST00000558879 HIGD2AQ9BW72 106 aa9.88□□□□□ -0.83
LRRC28-210ENST00000558879 HSPB8Q9UJY1 196 aa9.88□□□□□ -0.83
LRRC28-210ENST00000558879 LOC107984156A0A0G2JMH3 177 aa9.87□□□□□ -0.83
LRRC28-210ENST00000558879 ARL17AQ8IVW1 177 aa9.87□□□□□ -0.83
LRRC28-210ENST00000558879 LINC00337Q8N6G1 96 aa9.87□□□□□ -0.83
LRRC28-210ENST00000558879 SPRR4Q96PI1 79 aa9.87□□□□□ -0.83
LRRC28-210ENST00000558879 MAP1LC3CQ9BXW4 147 aa9.87□□□□□ -0.83
LRRC28-210ENST00000558879 KCNQ1DNQ9H478 68 aa9.87□□□□□ -0.83
LRRC28-210ENST00000558879 CTAG1AP78358 180 aa9.86□□□□□ -0.83
LRRC28-210ENST00000558879 J3QQQ9 107 aa9.85□□□□□ -0.83
LRRC28-210ENST00000558879 DPM2O94777 84 aa9.85□□□□□ -0.83
LRRC28-210ENST00000558879 C3orf22Q8N5N4 141 aa9.85□□□□□ -0.83
LRRC28-210ENST00000558879 TRBV10-3A0A0K0K1G6 114 aa9.84□□□□□ -0.83
LRRC28-210ENST00000558879 IGKCP01834 107 aa9.84□□□□□ -0.83
LRRC28-210ENST00000558879 FABP4P15090 132 aa9.84□□□□□ -0.83
LRRC28-210ENST00000558879 PMCHL2Q9BQD1 86 aa9.84□□□□□ -0.83
LRRC28-210ENST00000558879 NMUP48645 174 aa9.83□□□□□ -0.84
LRRC28-210ENST00000558879 HERVK_113P61574 105 aa9.83□□□□□ -0.84
LRRC28-210ENST00000558879 DAND5Q8N907 189 aa9.83□□□□□ -0.84
LRRC28-210ENST00000558879 TRBV10-2A0A0K0K1G8 114 aa9.81□□□□□ -0.84
LRRC28-210ENST00000558879 S100A1P23297 94 aa9.81□□□□□ -0.84
LRRC28-210ENST00000558879 RETNLBQ9BQ08 111 aa9.81□□□□□ -0.84
LRRC28-210ENST00000558879 ZNF706Q9Y5V0 76 aaPredicted RBP9.81□□□□□ -0.84
LRRC28-210ENST00000558879 SMCR5Q8TEV8 140 aa9.8□□□□□ -0.84
LRRC28-210ENST00000558879 ETDCA0A1B0GVM5 59 aa9.79□□□□□ -0.84
LRRC28-210ENST00000558879 LGALS3P17931 250 aaKnown RBP9.79□□□□□ -0.84
LRRC28-210ENST00000558879 HIST1H2BKO60814 126 aa9.78□□□□□ -0.84
LRRC28-210ENST00000558879 NDUFC2O95298 119 aa9.78□□□□□ -0.84
LRRC28-210ENST00000558879 HIST1H2BJP06899 126 aa9.78□□□□□ -0.84
LRRC28-210ENST00000558879 HIST1H2BOP23527 126 aa9.78□□□□□ -0.84
LRRC28-210ENST00000558879 HIST1H2BBP33778 126 aa9.78□□□□□ -0.84
LRRC28-210ENST00000558879 HIST1H2BDP58876 126 aa9.78□□□□□ -0.84
LRRC28-210ENST00000558879 HIST1H2BCP62807 126 aa9.78□□□□□ -0.84
LRRC28-210ENST00000558879 HIST2H2BEQ16778 126 aa9.78□□□□□ -0.84
LRRC28-210ENST00000558879 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-210ENST00000558879 HIST1H2BHQ93079 126 aa9.78□□□□□ -0.84
LRRC28-210ENST00000558879 HIST1H2BNQ99877 126 aa9.78□□□□□ -0.84
LRRC28-210ENST00000558879 HIST1H2BMQ99879 126 aa9.78□□□□□ -0.84
LRRC28-210ENST00000558879 SPANXB1Q9NS25 103 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-210ENST00000558879 B5MCH6 92 aa9.77□□□□□ -0.85
LRRC28-210ENST00000558879 E9PLD3 99 aa9.77□□□□□ -0.85
LRRC28-210ENST00000558879 DDTP30046 118 aa9.77□□□□□ -0.85
LRRC28-210ENST00000558879 TPRXLQ17RH7 258 aa9.77□□□□□ -0.85
LRRC28-210ENST00000558879 LINC00483Q53H64 154 aa9.77□□□□□ -0.85
LRRC28-210ENST00000558879 SOSTDC1Q6X4U4 206 aa9.76□□□□□ -0.85
LRRC28-210ENST00000558879 MIEN1Q9BRT3 115 aa9.76□□□□□ -0.85
LRRC28-210ENST00000558879 A0A0J9YXY3 114 aa9.75□□□□□ -0.85
LRRC28-210ENST00000558879 SYS1-DBNDD2H3BUS1 97 aa9.75□□□□□ -0.85
LRRC28-210ENST00000558879 IGLV6-57P01721 117 aa9.75□□□□□ -0.85
LRRC28-210ENST00000558879 S100A12P80511 92 aa9.75□□□□□ -0.85
LRRC28-210ENST00000558879 SPAG11AQ6PDA7 123 aa9.75□□□□□ -0.85
LRRC28-210ENST00000558879 EIF4EBP3O60516 100 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-210ENST00000558879 Q6ZRX8 168 aa9.74□□□□□ -0.85
LRRC28-210ENST00000558879 Q9BRP9 147 aa9.74□□□□□ -0.85
LRRC28-210ENST00000558879 MUC2Q02817 5179 aa9.73□□□□□ -0.85
LRRC28-210ENST00000558879 ADAMTSL4-AS1Q5T5F5 129 aa9.73□□□□□ -0.85
LRRC28-210ENST00000558879 LINC01545Q5VT33 79 aa9.73□□□□□ -0.85
LRRC28-210ENST00000558879 ERC2-IT1O76042 136 aa9.72□□□□□ -0.85
LRRC28-210ENST00000558879 PPDPFQ9H3Y8 114 aa9.72□□□□□ -0.85
LRRC28-210ENST00000558879 Q8NBF4 154 aa9.71□□□□□ -0.86
LRRC28-210ENST00000558879 LITAFQ99732 161 aa9.71□□□□□ -0.86
LRRC28-210ENST00000558879 IGLV7-46A0A075B6I9 117 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms