RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 Q6ZN92 141 aa3.78□□□□□ -1.8
LRRC28-209ENST00000558861 C5orf38Q86SI9 138 aa3.78□□□□□ -1.8
LRRC28-209ENST00000558861 BAGE3Q86Y29 109 aa3.78□□□□□ -1.8
LRRC28-209ENST00000558861 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.77□□□□□ -1.81
LRRC28-209ENST00000558861 TRAV12-1A0A0B4J245 112 aa3.77□□□□□ -1.81
LRRC28-209ENST00000558861 IGHV1-58A0A0C4DH39 117 aa3.77□□□□□ -1.81
LRRC28-209ENST00000558861 TINCRA0A1B0GVN0 87 aa3.77□□□□□ -1.81
LRRC28-209ENST00000558861 C16orf90A8MZG2 172 aa3.77□□□□□ -1.81
LRRC28-209ENST00000558861 HSBP1O75506 76 aa3.77□□□□□ -1.81
LRRC28-209ENST00000558861 ATP5LO75964 103 aa3.77□□□□□ -1.81
LRRC28-209ENST00000558861 SDIM1Q6ZPB5 146 aa3.77□□□□□ -1.81
LRRC28-209ENST00000558861 C9orf163Q8N9P6 203 aa3.77□□□□□ -1.81
LRRC28-209ENST00000558861 IFI27L1Q96BM0 104 aa3.77□□□□□ -1.81
LRRC28-209ENST00000558861 C2orf88Q9BSF0 95 aa3.77□□□□□ -1.81
LRRC28-209ENST00000558861 CDKN2A-AS1Q9UH64 79 aa3.77□□□□□ -1.81
LRRC28-209ENST00000558861 LRP1Q07954 4544 aaKnown RBP3.77□□□□□ -1.81
LRRC28-209ENST00000558861 FAT3Q8TDW7 4589 aa3.77□□□□□ -1.81
LRRC28-209ENST00000558861 C11orf86A6NJI1 115 aa3.76□□□□□ -1.81
LRRC28-209ENST00000558861 PANO1I0J062 215 aa3.76□□□□□ -1.81
LRRC28-209ENST00000558861 ZNF22P17026 224 aaPredicted RBP3.76□□□□□ -1.81
LRRC28-209ENST00000558861 HERVK_113P63121 156 aa3.76□□□□□ -1.81
LRRC28-209ENST00000558861 CIRBPQ14011 172 aaKnown RBP3.76□□□□□ -1.81
LRRC28-209ENST00000558861 LINC00526Q96FQ7 95 aa3.76□□□□□ -1.81
LRRC28-209ENST00000558861 PACRGQ96M98 296 aaPredicted RBP3.76□□□□□ -1.81
LRRC28-209ENST00000558861 LEPROTL1O95214 131 aa3.75□□□□□ -1.81
LRRC28-209ENST00000558861 SEC11AP67812 179 aa3.75□□□□□ -1.81
LRRC28-209ENST00000558861 SPAG11BQ08648 103 aa3.75□□□□□ -1.81
LRRC28-209ENST00000558861 Q6ZRU5 148 aa3.75□□□□□ -1.81
LRRC28-209ENST00000558861 OR10D4PQ8NGN7 298 aa3.75□□□□□ -1.81
LRRC28-209ENST00000558861 MRPL35Q9NZE8 188 aaKnown RBP3.75□□□□□ -1.81
LRRC28-209ENST00000558861 FLG2Q5D862 2391 aaPredicted RBP3.74□□□□□ -1.81
LRRC28-209ENST00000558861 F8VRH5 84 aa3.74□□□□□ -1.81
LRRC28-209ENST00000558861 FABP4P15090 132 aa3.74□□□□□ -1.81
LRRC28-209ENST00000558861 NDUFA6P56556 154 aa3.74□□□□□ -1.81
LRRC28-209ENST00000558861 LINC00469Q8N7U9 141 aa3.74□□□□□ -1.81
LRRC28-209ENST00000558861 ORAOV1Q8WV07 137 aa3.74□□□□□ -1.81
LRRC28-209ENST00000558861 CHAC1Q9BUX1 264 aa3.74□□□□□ -1.81
LRRC28-209ENST00000558861 HSPB8Q9UJY1 196 aa3.74□□□□□ -1.81
LRRC28-209ENST00000558861 A0A1B0GWB2 263 aa3.73□□□□□ -1.81
LRRC28-209ENST00000558861 APOMO95445 188 aa3.73□□□□□ -1.81
LRRC28-209ENST00000558861 SYCNQ0VAF6 134 aa3.73□□□□□ -1.81
LRRC28-209ENST00000558861 LINC01545Q5VT33 79 aa3.73□□□□□ -1.81
LRRC28-209ENST00000558861 C2orf82Q6UX34 121 aa3.73□□□□□ -1.81
LRRC28-209ENST00000558861 UNQ6190/PRO20217Q6UXQ8 127 aa3.73□□□□□ -1.81
LRRC28-209ENST00000558861 Q8IZM0 81 aa3.73□□□□□ -1.81
LRRC28-209ENST00000558861 HIST3H2BBQ8N257 126 aa3.73□□□□□ -1.81
LRRC28-209ENST00000558861 CARD19Q96LW7 228 aa3.73□□□□□ -1.81
LRRC28-209ENST00000558861 HIST1H2BLQ99880 126 aa3.73□□□□□ -1.81
LRRC28-209ENST00000558861 GEMIN7Q9H840 131 aaKnown RBP3.73□□□□□ -1.81
LRRC28-209ENST00000558861 C6orf48Q9UBA6 75 aa3.73□□□□□ -1.81
LRRC28-209ENST00000558861 CHTOPQ9Y3Y2 248 aaKnown RBP3.73□□□□□ -1.81
LRRC28-209ENST00000558861 A0A096LNI7 61 aa3.72□□□□□ -1.81
LRRC28-209ENST00000558861 TMEM223A0PJW6 202 aa3.72□□□□□ -1.81
LRRC28-209ENST00000558861 SYS1-DBNDD2H3BUS1 97 aa3.72□□□□□ -1.81
LRRC28-209ENST00000558861 SPINK8P0C7L1 97 aa3.72□□□□□ -1.81
LRRC28-209ENST00000558861 C3orf79P0CE67 100 aa3.72□□□□□ -1.81
LRRC28-209ENST00000558861 CHTF8P0CG12 524 aa3.72□□□□□ -1.81
LRRC28-209ENST00000558861 SPACA4Q8TDM5 124 aa3.72□□□□□ -1.81
LRRC28-209ENST00000558861 ZNF625Q96I27 306 aaPredicted RBP3.72□□□□□ -1.81
LRRC28-209ENST00000558861 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.71□□□□□ -1.82
LRRC28-209ENST00000558861 A8MU10 97 aa3.71□□□□□ -1.82
LRRC28-209ENST00000558861 TLX1NBP0CAT3 122 aa3.71□□□□□ -1.82
LRRC28-209ENST00000558861 TSPEAR-AS2P59090 65 aa3.71□□□□□ -1.82
LRRC28-209ENST00000558861 HAMPP81172 84 aa3.71□□□□□ -1.82
LRRC28-209ENST00000558861 C9orf116Q5BN46 136 aaPredicted RBP3.71□□□□□ -1.82
LRRC28-209ENST00000558861 SCXQ7RTU7 201 aa3.71□□□□□ -1.82
LRRC28-209ENST00000558861 MTURNQ8N3F0 131 aa3.71□□□□□ -1.82
LRRC28-209ENST00000558861 CIRBP-AS1Q8TBR5 109 aa3.71□□□□□ -1.82
LRRC28-209ENST00000558861 COX7B2Q8TF08 81 aa3.71□□□□□ -1.82
LRRC28-209ENST00000558861 CAMK2N2Q96S95 79 aa3.71□□□□□ -1.82
LRRC28-209ENST00000558861 PMCHL2Q9BQD1 86 aa3.71□□□□□ -1.82
LRRC28-209ENST00000558861 TNXBP22105 4242 aa3.71□□□□□ -1.82
LRRC28-209ENST00000558861 HERC1Q15751 4861 aa3.7□□□□□ -1.82
LRRC28-209ENST00000558861 TRBV30A0A0K0K1B3 111 aa3.7□□□□□ -1.82
LRRC28-209ENST00000558861 H3BRM9 83 aa3.7□□□□□ -1.82
LRRC28-209ENST00000558861 NDUFA1O15239 70 aa3.7□□□□□ -1.82
LRRC28-209ENST00000558861 DPM2O94777 84 aa3.7□□□□□ -1.82
LRRC28-209ENST00000558861 PLNP26678 52 aa3.7□□□□□ -1.82
LRRC28-209ENST00000558861 CXCL5P42830 114 aa3.7□□□□□ -1.82
LRRC28-209ENST00000558861 KRTAP10-4P60372 401 aaPredicted RBP3.7□□□□□ -1.82
LRRC28-209ENST00000558861 MAP1LC3CQ9BXW4 147 aa3.7□□□□□ -1.82
LRRC28-209ENST00000558861 PLAC8Q9NZF1 115 aa3.7□□□□□ -1.82
LRRC28-209ENST00000558861 H0Y8G0 127 aa3.69□□□□□ -1.82
LRRC28-209ENST00000558861 IGKCP01834 107 aa3.69□□□□□ -1.82
LRRC28-209ENST00000558861 C6orf226Q5I0X4 101 aa3.69□□□□□ -1.82
LRRC28-209ENST00000558861 TMEM170BQ5T4T1 132 aa3.69□□□□□ -1.82
LRRC28-209ENST00000558861 TOMM7Q9P0U1 55 aa3.69□□□□□ -1.82
LRRC28-209ENST00000558861 DMBT1Q9UGM3 2413 aaPredicted RBP3.68□□□□□ -1.82
LRRC28-209ENST00000558861 LOC107984640A0A0U1RRK4 108 aa3.68□□□□□ -1.82
LRRC28-209ENST00000558861 A0A1W2PNN7 141 aa3.68□□□□□ -1.82
LRRC28-209ENST00000558861 NDUFC2-KCTD14E9PQ53 114 aa3.68□□□□□ -1.82
LRRC28-209ENST00000558861 IGKV2D-26A0A0A0MRZ7 120 aa3.67□□□□□ -1.82
LRRC28-209ENST00000558861 IGKV2-24A0A0C4DH68 120 aa3.67□□□□□ -1.82
LRRC28-209ENST00000558861 LEPROTO15243 131 aa3.67□□□□□ -1.82
LRRC28-209ENST00000558861 KRTDAPP60985 99 aa3.67□□□□□ -1.82
LRRC28-209ENST00000558861 CKS1BP61024 79 aa3.67□□□□□ -1.82
LRRC28-209ENST00000558861 Q8NDZ9 215 aa3.67□□□□□ -1.82
LRRC28-209ENST00000558861 J3QQQ9 107 aa3.66□□□□□ -1.82
LRRC28-209ENST00000558861 S100A6P06703 90 aa3.66□□□□□ -1.82
LRRC28-209ENST00000558861 MAJINQ3KP22 176 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms