RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 HSPB8Q9UJY1 196 aa9.18□□□□□ -0.94
RPL28-207ENST00000558815 IGLV1-50A0A075B6I6 118 aa9.17□□□□□ -0.94
RPL28-207ENST00000558815 ATP6V1G1O75348 118 aa9.17□□□□□ -0.94
RPL28-207ENST00000558815 SMIM13P0DJ93 91 aa9.17□□□□□ -0.94
RPL28-207ENST00000558815 Q8NDZ9 215 aa9.17□□□□□ -0.94
RPL28-207ENST00000558815 PMCHL2Q9BQD1 86 aa9.17□□□□□ -0.94
RPL28-207ENST00000558815 NDUFA12Q9UI09 145 aa9.16□□□□□ -0.94
RPL28-207ENST00000558815 TMEM238C9JI98 176 aa9.14□□□□□ -0.95
RPL28-207ENST00000558815 FAM19A1Q7Z5A9 133 aa9.14□□□□□ -0.95
RPL28-207ENST00000558815 MYMXA0A1B0GTQ4 84 aa9.13□□□□□ -0.95
RPL28-207ENST00000558815 DPM2O94777 84 aa9.13□□□□□ -0.95
RPL28-207ENST00000558815 PLNP26678 52 aa9.13□□□□□ -0.95
RPL28-207ENST00000558815 RPL13AP40429 203 aaKnown RBP9.13□□□□□ -0.95
RPL28-207ENST00000558815 TSPEAR-AS2P59090 65 aa9.13□□□□□ -0.95
RPL28-207ENST00000558815 HERV-K104P63124 156 aa9.13□□□□□ -0.95
RPL28-207ENST00000558815 PRLHP81277 87 aa9.13□□□□□ -0.95
RPL28-207ENST00000558815 MIR7-3HGQ8N6C7 128 aa9.13□□□□□ -0.95
RPL28-207ENST00000558815 TMEM126AQ9H061 195 aa9.13□□□□□ -0.95
RPL28-207ENST00000558815 UBR4Q5T4S7 5183 aa9.12□□□□□ -0.95
RPL28-207ENST00000558815 LEPROTO15243 131 aa9.12□□□□□ -0.95
RPL28-207ENST00000558815 HERVK_113P61574 105 aa9.12□□□□□ -0.95
RPL28-207ENST00000558815 MAP1LC3CQ9BXW4 147 aa9.12□□□□□ -0.95
RPL28-207ENST00000558815 IGKCP01834 107 aa9.11□□□□□ -0.95
RPL28-207ENST00000558815 BOD1L2Q8IYS8 172 aa9.11□□□□□ -0.95
RPL28-207ENST00000558815 PLEKHB2Q96CS7 222 aa9.11□□□□□ -0.95
RPL28-207ENST00000558815 M0R378 163 aa9.1□□□□□ -0.95
RPL28-207ENST00000558815 NCR3O14931 201 aa9.1□□□□□ -0.95
RPL28-207ENST00000558815 HIST1H2BKO60814 126 aa9.1□□□□□ -0.95
RPL28-207ENST00000558815 HIST1H2BJP06899 126 aa9.1□□□□□ -0.95
RPL28-207ENST00000558815 HIST1H2BOP23527 126 aa9.1□□□□□ -0.95
RPL28-207ENST00000558815 HIST1H2BBP33778 126 aa9.1□□□□□ -0.95
RPL28-207ENST00000558815 HIST1H2BDP58876 126 aa9.1□□□□□ -0.95
RPL28-207ENST00000558815 HIST1H2BCP62807 126 aa9.1□□□□□ -0.95
RPL28-207ENST00000558815 HIST2H2BEQ16778 126 aa9.1□□□□□ -0.95
RPL28-207ENST00000558815 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.1□□□□□ -0.95
RPL28-207ENST00000558815 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
RPL28-207ENST00000558815 HIST1H2BHQ93079 126 aa9.1□□□□□ -0.95
RPL28-207ENST00000558815 HIST1H2BNQ99877 126 aa9.1□□□□□ -0.95
RPL28-207ENST00000558815 HIST1H2BMQ99879 126 aa9.1□□□□□ -0.95
RPL28-207ENST00000558815 ANAPC11Q9NYG5 84 aa9.1□□□□□ -0.95
RPL28-207ENST00000558815 A0A087X002 238 aa9.09□□□□□ -0.95
RPL28-207ENST00000558815 LINC00587B1AMM8 73 aa9.09□□□□□ -0.95
RPL28-207ENST00000558815 J3QQQ9 107 aa9.09□□□□□ -0.95
RPL28-207ENST00000558815 LGALS3P17931 250 aaKnown RBP9.08□□□□□ -0.96
RPL28-207ENST00000558815 DAND5Q8N907 189 aa9.08□□□□□ -0.96
RPL28-207ENST00000558815 CRYGAP11844 174 aa9.07□□□□□ -0.96
RPL28-207ENST00000558815 LRP2P98164 4655 aa9.07□□□□□ -0.96
RPL28-207ENST00000558815 TYMSOSQ8TAI1 123 aa9.06□□□□□ -0.96
RPL28-207ENST00000558815 HIGD2AQ9BW72 106 aa9.06□□□□□ -0.96
RPL28-207ENST00000558815 SYS1-DBNDD2H3BUS1 97 aa9.04□□□□□ -0.96
RPL28-207ENST00000558815 TSPAN13O95857 204 aa9.04□□□□□ -0.96
RPL28-207ENST00000558815 NMUP48645 174 aa9.03□□□□□ -0.96
RPL28-207ENST00000558815 MIEN1Q9BRT3 115 aa9.03□□□□□ -0.96
RPL28-207ENST00000558815 PRYO14603 147 aa9.02□□□□□ -0.97
RPL28-207ENST00000558815 NPC2P61916 151 aa9.02□□□□□ -0.97
RPL28-207ENST00000558815 IGKV2D-26A0A0A0MRZ7 120 aa9.01□□□□□ -0.97
RPL28-207ENST00000558815 TRBV10-3A0A0K0K1G6 114 aa9.01□□□□□ -0.97
RPL28-207ENST00000558815 E9PLD3 99 aa9.01□□□□□ -0.97
RPL28-207ENST00000558815 PRR4Q16378 134 aa9.01□□□□□ -0.97
RPL28-207ENST00000558815 KRTAP13-2Q52LG2 175 aa9.01□□□□□ -0.97
RPL28-207ENST00000558815 FAM229BQ4G0N7 80 aa9□□□□□ -0.97
RPL28-207ENST00000558815 LPAP08519 4548 aa8.99□□□□□ -0.97
RPL28-207ENST00000558815 A0A0J9YXY3 114 aa8.99□□□□□ -0.97
RPL28-207ENST00000558815 ETDCA0A1B0GVM5 59 aa8.99□□□□□ -0.97
RPL28-207ENST00000558815 LINC01545Q5VT33 79 aa8.99□□□□□ -0.97
RPL28-207ENST00000558815 PET117Q6UWS5 81 aa8.99□□□□□ -0.97
RPL28-207ENST00000558815 C3orf79P0CE67 100 aa8.98□□□□□ -0.97
RPL28-207ENST00000558815 KRTDAPP60985 99 aa8.98□□□□□ -0.97
RPL28-207ENST00000558815 S100A12P80511 92 aa8.98□□□□□ -0.97
RPL28-207ENST00000558815 KCNQ1DNQ9H478 68 aa8.98□□□□□ -0.97
RPL28-207ENST00000558815 DDTP30046 118 aa8.97□□□□□ -0.97
RPL28-207ENST00000558815 LINC00337Q8N6G1 96 aa8.97□□□□□ -0.97
RPL28-207ENST00000558815 LOC107984156A0A0G2JMH3 177 aa8.96□□□□□ -0.98
RPL28-207ENST00000558815 SPRR1AP35321 89 aa8.96□□□□□ -0.98
RPL28-207ENST00000558815 ADAMTSL4-AS1Q5T5F5 129 aa8.96□□□□□ -0.98
RPL28-207ENST00000558815 ARL17AQ8IVW1 177 aa8.96□□□□□ -0.98
RPL28-207ENST00000558815 SPANXB1Q9NS25 103 aaPredicted RBP8.96□□□□□ -0.98
RPL28-207ENST00000558815 S100A7L2Q5SY68 101 aa8.95□□□□□ -0.98
RPL28-207ENST00000558815 SOSTDC1Q6X4U4 206 aa8.95□□□□□ -0.98
RPL28-207ENST00000558815 C3orf22Q8N5N4 141 aa8.95□□□□□ -0.98
RPL28-207ENST00000558815 LINC00304Q8N9R0 145 aa8.95□□□□□ -0.98
RPL28-207ENST00000558815 SMCR5Q8TEV8 140 aa8.95□□□□□ -0.98
RPL28-207ENST00000558815 SPRR4Q96PI1 79 aa8.95□□□□□ -0.98
RPL28-207ENST00000558815 TRBV10-2A0A0K0K1G8 114 aa8.94□□□□□ -0.98
RPL28-207ENST00000558815 EIF4EBP3O60516 100 aaPredicted RBP8.94□□□□□ -0.98
RPL28-207ENST00000558815 COA6Q5JTJ3 125 aaKnown RBP8.94□□□□□ -0.98
RPL28-207ENST00000558815 ZNF706Q9Y5V0 76 aaPredicted RBP8.94□□□□□ -0.98
RPL28-207ENST00000558815 ZNF815PA8K554 130 aa8.93□□□□□ -0.98
RPL28-207ENST00000558815 KRTAP4-16G5E9R7 235 aaPredicted RBP8.93□□□□□ -0.98
RPL28-207ENST00000558815 NDUFC2O95298 119 aa8.93□□□□□ -0.98
RPL28-207ENST00000558815 TTTY13Q9BZ97 58 aa8.93□□□□□ -0.98
RPL28-207ENST00000558815 PPDPFQ9H3Y8 114 aa8.93□□□□□ -0.98
RPL28-207ENST00000558815 C20orf202A1L168 122 aa8.91□□□□□ -0.98
RPL28-207ENST00000558815 B5MCH6 92 aa8.91□□□□□ -0.98
RPL28-207ENST00000558815 ATOH7Q8N100 152 aa8.9□□□□□ -0.98
RPL28-207ENST00000558815 RETNLBQ9BQ08 111 aa8.9□□□□□ -0.98
RPL28-207ENST00000558815 TRAV23DV6A0A075B6W5 121 aa8.89□□□□□ -0.99
RPL28-207ENST00000558815 LINC00308Q8TCZ7 52 aa8.89□□□□□ -0.99
RPL28-207ENST00000558815 LITAFQ99732 161 aa8.89□□□□□ -0.99
RPL28-207ENST00000558815 TIMM17BO60830 172 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms