RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 KIAA1644Q3SXP7 199 aa3.01□□□□□ -1.93
LRRC28-208ENST00000558771 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
LRRC28-208ENST00000558771 TEX43Q6ZNM6 134 aa3.01□□□□□ -1.93
LRRC28-208ENST00000558771 FAM19A1Q7Z5A9 133 aa3.01□□□□□ -1.93
LRRC28-208ENST00000558771 LINC01551Q86U37 167 aa3.01□□□□□ -1.93
LRRC28-208ENST00000558771 NKAPP1Q8N9T2 125 aa3.01□□□□□ -1.93
LRRC28-208ENST00000558771 TMEM141Q96I45 108 aa3.01□□□□□ -1.93
LRRC28-208ENST00000558771 LITAFQ99732 161 aa3.01□□□□□ -1.93
LRRC28-208ENST00000558771 EIF5A2Q9GZV4 153 aaKnown RBP3.01□□□□□ -1.93
LRRC28-208ENST00000558771 OSTCQ9NRP0 149 aa3.01□□□□□ -1.93
LRRC28-208ENST00000558771 IGLV9-49A0A0B4J1Y8 123 aa3□□□□□ -1.93
LRRC28-208ENST00000558771 TMEM238C9JI98 176 aa3□□□□□ -1.93
LRRC28-208ENST00000558771 D6R8Y8 96 aa3□□□□□ -1.93
LRRC28-208ENST00000558771 CEBPGP53567 150 aa3□□□□□ -1.93
LRRC28-208ENST00000558771 LCE1FQ5T754 118 aa3□□□□□ -1.93
LRRC28-208ENST00000558771 DAND5Q8N907 189 aa3□□□□□ -1.93
LRRC28-208ENST00000558771 Q8NBF4 154 aa3□□□□□ -1.93
LRRC28-208ENST00000558771 C2orf88Q9BSF0 95 aa3□□□□□ -1.93
LRRC28-208ENST00000558771 V9GYV3 84 aa3□□□□□ -1.93
LRRC28-208ENST00000558771 RAB5AP20339 215 aa2.99□□□□□ -1.93
LRRC28-208ENST00000558771 CXCL5P42830 114 aa2.99□□□□□ -1.93
LRRC28-208ENST00000558771 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
LRRC28-208ENST00000558771 FAM19A3Q7Z5A8 133 aa2.99□□□□□ -1.93
LRRC28-208ENST00000558771 CBLN2Q8IUK8 224 aa2.99□□□□□ -1.93
LRRC28-208ENST00000558771 AMELXQ99217 191 aa2.99□□□□□ -1.93
LRRC28-208ENST00000558771 SMIM7Q9BQ49 75 aa2.99□□□□□ -1.93
LRRC28-208ENST00000558771 TMEM126AQ9H061 195 aa2.99□□□□□ -1.93
LRRC28-208ENST00000558771 CDKN2A-AS1Q9UH64 79 aa2.99□□□□□ -1.93
LRRC28-208ENST00000558771 NAT8BQ9UHF3 227 aa2.99□□□□□ -1.93
LRRC28-208ENST00000558771 FLGP20930 4061 aaPredicted RBP2.99□□□□□ -1.93
LRRC28-208ENST00000558771 HSBP1L1C9JCN9 74 aa2.98□□□□□ -1.93
LRRC28-208ENST00000558771 M0R378 163 aa2.98□□□□□ -1.93
LRRC28-208ENST00000558771 SPINK1P00995 79 aa2.98□□□□□ -1.93
LRRC28-208ENST00000558771 KRTAP10-12P60413 245 aa2.98□□□□□ -1.93
LRRC28-208ENST00000558771 RAB5BP61020 215 aa2.98□□□□□ -1.93
LRRC28-208ENST00000558771 IFITM2Q01629 132 aa2.98□□□□□ -1.93
LRRC28-208ENST00000558771 FAM74A3Q4VXF1 159 aa2.98□□□□□ -1.93
LRRC28-208ENST00000558771 C2orf66Q6UXQ4 117 aa2.98□□□□□ -1.93
LRRC28-208ENST00000558771 SPRR4Q96PI1 79 aa2.98□□□□□ -1.93
LRRC28-208ENST00000558771 HIGD2AQ9BW72 106 aa2.98□□□□□ -1.93
LRRC28-208ENST00000558771 GNB1LQ9BYB4 327 aa2.98□□□□□ -1.93
LRRC28-208ENST00000558771 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
LRRC28-208ENST00000558771 VCX2Q9H322 139 aa2.98□□□□□ -1.93
LRRC28-208ENST00000558771 NDUFA12Q9UI09 145 aa2.98□□□□□ -1.93
LRRC28-208ENST00000558771 A0A1B0GW15 77 aa2.97□□□□□ -1.93
LRRC28-208ENST00000558771 M0R2T5 61 aa2.97□□□□□ -1.93
LRRC28-208ENST00000558771 HERVK_113P63121 156 aa2.97□□□□□ -1.93
LRRC28-208ENST00000558771 PCOTHQ58A44 107 aa2.97□□□□□ -1.93
LRRC28-208ENST00000558771 Q8N377 158 aa2.97□□□□□ -1.93
LRRC28-208ENST00000558771 COX7B2Q8TF08 81 aa2.97□□□□□ -1.93
LRRC28-208ENST00000558771 IGLV8-61A0A075B6I0 122 aa2.96□□□□□ -1.94
LRRC28-208ENST00000558771 LOC389332A0A1B0GUA5 103 aa2.96□□□□□ -1.94
LRRC28-208ENST00000558771 SMIM27A0A1W2PRY6 76 aa2.96□□□□□ -1.94
LRRC28-208ENST00000558771 IGIPA6NJ69 53 aa2.96□□□□□ -1.94
LRRC28-208ENST00000558771 F8W036 122 aa2.96□□□□□ -1.94
LRRC28-208ENST00000558771 PPBPP02775 128 aa2.96□□□□□ -1.94
LRRC28-208ENST00000558771 SEC11AP67812 179 aa2.96□□□□□ -1.94
LRRC28-208ENST00000558771 MRPL54Q6P161 138 aaKnown RBP2.96□□□□□ -1.94
LRRC28-208ENST00000558771 TMEM136Q6ZRR5 245 aa2.96□□□□□ -1.94
LRRC28-208ENST00000558771 NOTCH2NLQ7Z3S9 236 aa2.96□□□□□ -1.94
LRRC28-208ENST00000558771 AKAP14Q86UN6 197 aa2.96□□□□□ -1.94
LRRC28-208ENST00000558771 ORMDL3Q8N138 153 aa2.96□□□□□ -1.94
LRRC28-208ENST00000558771 FAM19A2Q8N3H0 131 aa2.96□□□□□ -1.94
LRRC28-208ENST00000558771 PRELID3AQ96N28 172 aa2.96□□□□□ -1.94
LRRC28-208ENST00000558771 GEMIN7Q9H840 131 aaKnown RBP2.96□□□□□ -1.94
LRRC28-208ENST00000558771 CYSLTR1Q9Y271 337 aa2.96□□□□□ -1.94
LRRC28-208ENST00000558771 A0A1B0GXF2 115 aa2.95□□□□□ -1.94
LRRC28-208ENST00000558771 SNAPINO95295 136 aa2.95□□□□□ -1.94
LRRC28-208ENST00000558771 SRP19P09132 144 aaKnown RBP2.95□□□□□ -1.94
LRRC28-208ENST00000558771 RPL23P62829 140 aaKnown RBP2.95□□□□□ -1.94
LRRC28-208ENST00000558771 PDZD11Q5EBL8 140 aa2.95□□□□□ -1.94
LRRC28-208ENST00000558771 CBY1Q9Y3M2 126 aa2.95□□□□□ -1.94
LRRC28-208ENST00000558771 ZNF706Q9Y5V0 76 aaPredicted RBP2.95□□□□□ -1.94
LRRC28-208ENST00000558771 SSPOA2VEC9 5147 aa2.95□□□□□ -1.94
LRRC28-208ENST00000558771 SLC25A20O43772 301 aa2.94□□□□□ -1.94
LRRC28-208ENST00000558771 S100A8P05109 93 aa2.94□□□□□ -1.94
LRRC28-208ENST00000558771 PFN2P35080 140 aa2.94□□□□□ -1.94
LRRC28-208ENST00000558771 RPS29P62273 56 aaKnown RBP2.94□□□□□ -1.94
LRRC28-208ENST00000558771 ADIRFQ15847 76 aa2.94□□□□□ -1.94
LRRC28-208ENST00000558771 LINC00518Q8N0U6 118 aa2.94□□□□□ -1.94
LRRC28-208ENST00000558771 Q8N8P6 123 aa2.94□□□□□ -1.94
LRRC28-208ENST00000558771 Q8NDZ9 215 aa2.94□□□□□ -1.94
LRRC28-208ENST00000558771 MAP1LC3AQ9H492 121 aa2.94□□□□□ -1.94
LRRC28-208ENST00000558771 ATP5LO75964 103 aa2.93□□□□□ -1.94
LRRC28-208ENST00000558771 SPINK8P0C7L1 97 aa2.93□□□□□ -1.94
LRRC28-208ENST00000558771 RAB14P61106 215 aa2.93□□□□□ -1.94
LRRC28-208ENST00000558771 MOBPQ13875 183 aa2.93□□□□□ -1.94
LRRC28-208ENST00000558771 ORMDL2Q53FV1 153 aa2.93□□□□□ -1.94
LRRC28-208ENST00000558771 ALKAL2Q6UX46 152 aa2.93□□□□□ -1.94
LRRC28-208ENST00000558771 SMCR5Q8TEV8 140 aa2.93□□□□□ -1.94
LRRC28-208ENST00000558771 TIMM17AQ99595 171 aa2.93□□□□□ -1.94
LRRC28-208ENST00000558771 SND1-IT1Q9HBX3 110 aa2.93□□□□□ -1.94
LRRC28-208ENST00000558771 USH2AO75445 5202 aa2.92□□□□□ -1.94
LRRC28-208ENST00000558771 TINCRA0A1B0GVN0 87 aa2.92□□□□□ -1.94
LRRC28-208ENST00000558771 LINC00483Q53H64 154 aa2.92□□□□□ -1.94
LRRC28-208ENST00000558771 COX6B2Q6YFQ2 88 aa2.92□□□□□ -1.94
LRRC28-208ENST00000558771 SSBP3-AS1Q7Z2R9 100 aa2.92□□□□□ -1.94
LRRC28-208ENST00000558771 LAMTOR2Q9Y2Q5 125 aa2.92□□□□□ -1.94
LRRC28-208ENST00000558771 C9orf92A6NGG3 77 aa2.91□□□□□ -1.94
LRRC28-208ENST00000558771 ATP5L2Q7Z4Y8 100 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms