RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 C2orf48Q96LS8 159 aa8.52□□□□□ -1.05
SMAD3-207ENST00000558763 ZNF561-AS1K7EIQ3 104 aa8.52□□□□□ -1.05
SMAD3-207ENST00000558763 Q6ZRU5 148 aa8.52□□□□□ -1.05
SMAD3-207ENST00000558763 CLEC2BQ92478 149 aa8.52□□□□□ -1.05
SMAD3-207ENST00000558763 NDUFC2O95298 119 aa8.51□□□□□ -1.05
SMAD3-207ENST00000558763 LST1O00453 97 aa8.5□□□□□ -1.05
SMAD3-207ENST00000558763 RPL28P46779 137 aaKnown RBP8.5□□□□□ -1.05
SMAD3-207ENST00000558763 PRR3P79522 188 aaKnown RBP8.5□□□□□ -1.05
SMAD3-207ENST00000558763 CAMK2N2Q96S95 79 aa8.5□□□□□ -1.05
SMAD3-207ENST00000558763 M0R2N4 97 aa8.5□□□□□ -1.05
SMAD3-207ENST00000558763 OCIAD2Q56VL3 154 aa8.5□□□□□ -1.05
SMAD3-207ENST00000558763 ATXN8Q156A1 80 aa8.49□□□□□ -1.05
SMAD3-207ENST00000558763 LINC01620Q4KN68 170 aa8.49□□□□□ -1.05
SMAD3-207ENST00000558763 SMIM11BQ8TCY0 68 aa8.49□□□□□ -1.05
SMAD3-207ENST00000558763 NBDYA0A0U1RRE5 68 aa8.48□□□□□ -1.05
SMAD3-207ENST00000558763 SLPIP03973 132 aa8.48□□□□□ -1.05
SMAD3-207ENST00000558763 COX6CP09669 75 aa8.48□□□□□ -1.05
SMAD3-207ENST00000558763 ETDBQ3ZM63 59 aa8.48□□□□□ -1.05
SMAD3-207ENST00000558763 USP17L23D6RBM5 183 aa8.47□□□□□ -1.05
SMAD3-207ENST00000558763 F8WDY8 70 aa8.47□□□□□ -1.05
SMAD3-207ENST00000558763 TTC32Q5I0X7 151 aa8.47□□□□□ -1.05
SMAD3-207ENST00000558763 LINC01600Q96MT4 127 aa8.47□□□□□ -1.05
SMAD3-207ENST00000558763 FAM218AQ96MZ4 157 aa8.47□□□□□ -1.05
SMAD3-207ENST00000558763 C9JAW5 83 aa8.46□□□□□ -1.05
SMAD3-207ENST00000558763 RMI2Q96E14 147 aa8.46□□□□□ -1.06
SMAD3-207ENST00000558763 XAGE1AQ9HD64 81 aa8.46□□□□□ -1.06
SMAD3-207ENST00000558763 SACSQ9NZJ4 4579 aa8.46□□□□□ -1.06
SMAD3-207ENST00000558763 HYDINQ4G0P3 5121 aa8.45□□□□□ -1.06
SMAD3-207ENST00000558763 M0QXV9 152 aa8.45□□□□□ -1.06
SMAD3-207ENST00000558763 SLC25A20O43772 301 aa8.45□□□□□ -1.06
SMAD3-207ENST00000558763 SYCNQ0VAF6 134 aa8.45□□□□□ -1.06
SMAD3-207ENST00000558763 DNAH6Q9C0G6 4158 aa8.45□□□□□ -1.06
SMAD3-207ENST00000558763 NDUFC2-KCTD14E9PQ53 114 aa8.44□□□□□ -1.06
SMAD3-207ENST00000558763 NCR3O14931 201 aa8.44□□□□□ -1.06
SMAD3-207ENST00000558763 Q6ZRP5 223 aa8.44□□□□□ -1.06
SMAD3-207ENST00000558763 KMT2CQ8NEZ4 4911 aaKnown RBP8.43□□□□□ -1.06
SMAD3-207ENST00000558763 DNAH2Q9P225 4427 aa8.43□□□□□ -1.06
SMAD3-207ENST00000558763 TRBV10-2A0A0K0K1G8 114 aa8.43□□□□□ -1.06
SMAD3-207ENST00000558763 LCE6AA0A183 80 aa8.43□□□□□ -1.06
SMAD3-207ENST00000558763 OR13C6PQ8NH95 151 aa8.43□□□□□ -1.06
SMAD3-207ENST00000558763 Q6ZR54 194 aa8.42□□□□□ -1.06
SMAD3-207ENST00000558763 LECT2O14960 151 aa8.42□□□□□ -1.06
SMAD3-207ENST00000558763 VPREB1P12018 145 aa8.42□□□□□ -1.06
SMAD3-207ENST00000558763 TEN1Q86WV5 123 aa8.42□□□□□ -1.06
SMAD3-207ENST00000558763 CARD19Q96LW7 228 aa8.42□□□□□ -1.06
SMAD3-207ENST00000558763 IGLV6-57P01721 117 aa8.41□□□□□ -1.06
SMAD3-207ENST00000558763 TLX1NBP0CAT3 122 aa8.41□□□□□ -1.06
SMAD3-207ENST00000558763 RNF151Q2KHN1 245 aa8.41□□□□□ -1.06
SMAD3-207ENST00000558763 ANKRD29Q8N6D5 301 aa8.41□□□□□ -1.06
SMAD3-207ENST00000558763 TMEM126AQ9H061 195 aa8.41□□□□□ -1.06
SMAD3-207ENST00000558763 K7ERU9 68 aa8.41□□□□□ -1.06
SMAD3-207ENST00000558763 TRACP01848 142 aa8.41□□□□□ -1.06
SMAD3-207ENST00000558763 C9orf129Q5T035 196 aaKnown RBP8.41□□□□□ -1.06
SMAD3-207ENST00000558763 A0A087WYN8 130 aa8.4□□□□□ -1.06
SMAD3-207ENST00000558763 RPL18AQ02543 176 aaKnown RBP8.4□□□□□ -1.06
SMAD3-207ENST00000558763 H3BT86 120 aa8.39□□□□□ -1.07
SMAD3-207ENST00000558763 GAGE2EQ4V326 116 aa8.39□□□□□ -1.07
SMAD3-207ENST00000558763 GAGE2DQ9UEU5 116 aa8.39□□□□□ -1.07
SMAD3-207ENST00000558763 C22orf24Q9Y442 160 aa8.39□□□□□ -1.07
SMAD3-207ENST00000558763 PSCAO43653 123 aa8.38□□□□□ -1.07
SMAD3-207ENST00000558763 H0YGX0 51 aa8.37□□□□□ -1.07
SMAD3-207ENST00000558763 Q6ZRN7 208 aaPredicted RBP8.37□□□□□ -1.07
SMAD3-207ENST00000558763 TRBV10-3A0A0K0K1G6 114 aa8.37□□□□□ -1.07
SMAD3-207ENST00000558763 C1orf134Q5TEV5 83 aa8.37□□□□□ -1.07
SMAD3-207ENST00000558763 S100A7L2Q5SY68 101 aa8.36□□□□□ -1.07
SMAD3-207ENST00000558763 FRAS1Q86XX4 4008 aa8.36□□□□□ -1.07
SMAD3-207ENST00000558763 C6orf99Q4VX62 202 aa8.35□□□□□ -1.07
SMAD3-207ENST00000558763 PPDPFLQ8WWR9 84 aa8.35□□□□□ -1.07
SMAD3-207ENST00000558763 SERTAD4-AS1Q5TG53 156 aa8.35□□□□□ -1.07
SMAD3-207ENST00000558763 RYR2Q92736 4967 aa8.35□□□□□ -1.07
SMAD3-207ENST00000558763 KRTAP7-1Q8IUC3 87 aa8.34□□□□□ -1.07
SMAD3-207ENST00000558763 TEX49A0A1B0GTD5 131 aa8.33□□□□□ -1.08
SMAD3-207ENST00000558763 LRCOL1A6NCL2 159 aa8.33□□□□□ -1.08
SMAD3-207ENST00000558763 CNBPP62633 177 aaKnown RBP8.33□□□□□ -1.08
SMAD3-207ENST00000558763 M0R378 163 aa8.33□□□□□ -1.08
SMAD3-207ENST00000558763 LINC00167Q96N53 147 aa8.33□□□□□ -1.08
SMAD3-207ENST00000558763 PLA2G2DQ9UNK4 145 aa8.33□□□□□ -1.08
SMAD3-207ENST00000558763 TRAV23DV6A0A075B6W5 121 aa8.31□□□□□ -1.08
SMAD3-207ENST00000558763 DNAH17Q9UFH2 4485 aa8.31□□□□□ -1.08
SMAD3-207ENST00000558763 FAM168BA1KXE4 195 aa8.31□□□□□ -1.08
SMAD3-207ENST00000558763 BAALC-AS2P0C853 105 aa8.31□□□□□ -1.08
SMAD3-207ENST00000558763 IGLV5-37A0A075B6J1 123 aa8.3□□□□□ -1.08
SMAD3-207ENST00000558763 A0A1B0GX51 115 aa8.3□□□□□ -1.08
SMAD3-207ENST00000558763 RTL8CO15255 209 aa8.3□□□□□ -1.08
SMAD3-207ENST00000558763 HECTD4Q9Y4D8 3996 aa8.3□□□□□ -1.08
SMAD3-207ENST00000558763 LINC00575Q6W349 94 aa8.3□□□□□ -1.08
SMAD3-207ENST00000558763 Q8N814 137 aa8.3□□□□□ -1.08
SMAD3-207ENST00000558763 LOC107984640A0A0U1RRK4 108 aa8.29□□□□□ -1.08
SMAD3-207ENST00000558763 J3QR89 54 aa8.29□□□□□ -1.08
SMAD3-207ENST00000558763 ZNF73O43830 326 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-207ENST00000558763 C7orf33Q8WU49 177 aa8.29□□□□□ -1.08
SMAD3-207ENST00000558763 GAGE2BQ13066 116 aa8.28□□□□□ -1.08
SMAD3-207ENST00000558763 CBY1Q9Y3M2 126 aa8.28□□□□□ -1.08
SMAD3-207ENST00000558763 FAT2Q9NYQ8 4349 aa8.28□□□□□ -1.08
SMAD3-207ENST00000558763 RYR3Q15413 4870 aa8.28□□□□□ -1.08
SMAD3-207ENST00000558763 DNAL4O96015 105 aa8.28□□□□□ -1.08
SMAD3-207ENST00000558763 TNP2Q05952 138 aa8.28□□□□□ -1.08
SMAD3-207ENST00000558763 A0A087WTM6 91 aa8.27□□□□□ -1.09
SMAD3-207ENST00000558763 C14orf177Q52M58 125 aa8.27□□□□□ -1.09
SMAD3-207ENST00000558763 DIRC1Q969H9 104 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms