RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 LINC00158P58513 81 aa9.16□□□□□ -0.94
RPL28-206ENST00000558752 LINC00310P59036 64 aa9.16□□□□□ -0.94
RPL28-206ENST00000558752 RPL37AP8A6NKH3 93 aa9.15□□□□□ -0.94
RPL28-206ENST00000558752 ATP6V1G1O75348 118 aa9.15□□□□□ -0.94
RPL28-206ENST00000558752 MYMXA0A1B0GTQ4 84 aa9.14□□□□□ -0.95
RPL28-206ENST00000558752 VPREB1P12018 145 aa9.14□□□□□ -0.95
RPL28-206ENST00000558752 MAP1LC3CQ9BXW4 147 aa9.14□□□□□ -0.95
RPL28-206ENST00000558752 KRTAP9-6A0A140TA67 174 aa9.13□□□□□ -0.95
RPL28-206ENST00000558752 GAGE10A6NGK3 116 aa9.13□□□□□ -0.95
RPL28-206ENST00000558752 H0Y8G0 127 aa9.13□□□□□ -0.95
RPL28-206ENST00000558752 DPM2O94777 84 aa9.13□□□□□ -0.95
RPL28-206ENST00000558752 FABP4P15090 132 aa9.13□□□□□ -0.95
RPL28-206ENST00000558752 PLEKHB2Q96CS7 222 aa9.13□□□□□ -0.95
RPL28-206ENST00000558752 HERVK_113P61574 105 aa9.12□□□□□ -0.95
RPL28-206ENST00000558752 NDUFA12Q9UI09 145 aa9.12□□□□□ -0.95
RPL28-206ENST00000558752 FAT4Q6V0I7 4981 aa9.11□□□□□ -0.95
RPL28-206ENST00000558752 LEPROTO15243 131 aa9.11□□□□□ -0.95
RPL28-206ENST00000558752 KRTAP1-4P0C5Y4 121 aa9.11□□□□□ -0.95
RPL28-206ENST00000558752 MEIG1Q5JSS6 88 aa9.11□□□□□ -0.95
RPL28-206ENST00000558752 IGKCP01834 107 aa9.1□□□□□ -0.95
RPL28-206ENST00000558752 M0R378 163 aa9.09□□□□□ -0.95
RPL28-206ENST00000558752 HIST1H2BKO60814 126 aa9.09□□□□□ -0.95
RPL28-206ENST00000558752 HIST1H2BJP06899 126 aa9.09□□□□□ -0.95
RPL28-206ENST00000558752 SMIM13P0DJ93 91 aa9.09□□□□□ -0.95
RPL28-206ENST00000558752 HIST1H2BOP23527 126 aa9.09□□□□□ -0.95
RPL28-206ENST00000558752 HIST1H2BBP33778 126 aa9.09□□□□□ -0.95
RPL28-206ENST00000558752 NMUP48645 174 aa9.09□□□□□ -0.95
RPL28-206ENST00000558752 UBE2AP49459 152 aa9.09□□□□□ -0.95
RPL28-206ENST00000558752 HIST1H2BDP58876 126 aa9.09□□□□□ -0.95
RPL28-206ENST00000558752 HIST1H2BCP62807 126 aa9.09□□□□□ -0.95
RPL28-206ENST00000558752 HIST2H2BEQ16778 126 aa9.09□□□□□ -0.95
RPL28-206ENST00000558752 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.09□□□□□ -0.95
RPL28-206ENST00000558752 HIST1H2BHQ93079 126 aa9.09□□□□□ -0.95
RPL28-206ENST00000558752 HIST1H2BNQ99877 126 aa9.09□□□□□ -0.95
RPL28-206ENST00000558752 HIST1H2BMQ99879 126 aa9.09□□□□□ -0.95
RPL28-206ENST00000558752 IGKV2-28A0A075B6P5 120 aa9.08□□□□□ -0.96
RPL28-206ENST00000558752 IGKV2D-28P01615 120 aa9.08□□□□□ -0.96
RPL28-206ENST00000558752 IGKV2D-26A0A0A0MRZ7 120 aa9.07□□□□□ -0.96
RPL28-206ENST00000558752 A0A0U1RRA0 63 aa9.07□□□□□ -0.96
RPL28-206ENST00000558752 J3QQQ9 107 aa9.07□□□□□ -0.96
RPL28-206ENST00000558752 SCO1O75880 301 aa9.07□□□□□ -0.96
RPL28-206ENST00000558752 KRTAP13-1Q8IUC0 172 aa9.07□□□□□ -0.96
RPL28-206ENST00000558752 MIR7-3HGQ8N6C7 128 aa9.07□□□□□ -0.96
RPL28-206ENST00000558752 LOC107984156A0A0G2JMH3 177 aa9.06□□□□□ -0.96
RPL28-206ENST00000558752 ARL17AQ8IVW1 177 aa9.06□□□□□ -0.96
RPL28-206ENST00000558752 TMEM126AQ9H061 195 aa9.06□□□□□ -0.96
RPL28-206ENST00000558752 LGALS3P17931 250 aaKnown RBP9.05□□□□□ -0.96
RPL28-206ENST00000558752 BOD1L2Q8IYS8 172 aa9.05□□□□□ -0.96
RPL28-206ENST00000558752 SYS1-DBNDD2H3BUS1 97 aa9.04□□□□□ -0.96
RPL28-206ENST00000558752 CRYGAP11844 174 aa9.04□□□□□ -0.96
RPL28-206ENST00000558752 PET117Q6UWS5 81 aa9.04□□□□□ -0.96
RPL28-206ENST00000558752 Q8NDZ9 215 aa9.04□□□□□ -0.96
RPL28-206ENST00000558752 PMCHL2Q9BQD1 86 aa9.04□□□□□ -0.96
RPL28-206ENST00000558752 COA6Q5JTJ3 125 aaKnown RBP9.03□□□□□ -0.96
RPL28-206ENST00000558752 FAM19A1Q7Z5A9 133 aa9.03□□□□□ -0.96
RPL28-206ENST00000558752 E9PLD3 99 aa9.02□□□□□ -0.97
RPL28-206ENST00000558752 TSPEAR-AS2P59090 65 aa9.02□□□□□ -0.97
RPL28-206ENST00000558752 S100A12P80511 92 aa9.02□□□□□ -0.97
RPL28-206ENST00000558752 TMEM238C9JI98 176 aa9.01□□□□□ -0.97
RPL28-206ENST00000558752 TSPAN13O95857 204 aa9.01□□□□□ -0.97
RPL28-206ENST00000558752 FAM229BQ4G0N7 80 aa9.01□□□□□ -0.97
RPL28-206ENST00000558752 TRBV10-2A0A0K0K1G8 114 aa9□□□□□ -0.97
RPL28-206ENST00000558752 LCE2AQ5TA79 106 aaPredicted RBP9□□□□□ -0.97
RPL28-206ENST00000558752 LINC01545Q5VT33 79 aa9□□□□□ -0.97
RPL28-206ENST00000558752 TYMSOSQ8TAI1 123 aa9□□□□□ -0.97
RPL28-206ENST00000558752 KCNQ1DNQ9H478 68 aa9□□□□□ -0.97
RPL28-206ENST00000558752 PRYO14603 147 aa8.99□□□□□ -0.97
RPL28-206ENST00000558752 MIEN1Q9BRT3 115 aa8.99□□□□□ -0.97
RPL28-206ENST00000558752 NDUFC2O95298 119 aa8.98□□□□□ -0.97
RPL28-206ENST00000558752 PRLHP81277 87 aa8.98□□□□□ -0.97
RPL28-206ENST00000558752 LINC00337Q8N6G1 96 aa8.98□□□□□ -0.97
RPL28-206ENST00000558752 SPRR1AP35321 89 aa8.97□□□□□ -0.97
RPL28-206ENST00000558752 AKR1D1P51857 326 aa8.97□□□□□ -0.97
RPL28-206ENST00000558752 A0A087X002 238 aa8.96□□□□□ -0.98
RPL28-206ENST00000558752 S100A1P23297 94 aa8.96□□□□□ -0.98
RPL28-206ENST00000558752 CTAG1AP78358 180 aa8.96□□□□□ -0.98
RPL28-206ENST00000558752 A0A0J9YXY3 114 aa8.95□□□□□ -0.98
RPL28-206ENST00000558752 NCR3O14931 201 aa8.95□□□□□ -0.98
RPL28-206ENST00000558752 C3orf79P0CE67 100 aa8.95□□□□□ -0.98
RPL28-206ENST00000558752 SPANXB1Q9NS25 103 aaPredicted RBP8.95□□□□□ -0.98
RPL28-206ENST00000558752 TRBV10-3A0A0K0K1G6 114 aa8.94□□□□□ -0.98
RPL28-206ENST00000558752 TIMM17BO60830 172 aa8.94□□□□□ -0.98
RPL28-206ENST00000558752 DAND5Q8N907 189 aa8.94□□□□□ -0.98
RPL28-206ENST00000558752 CBY1Q9Y3M2 126 aa8.94□□□□□ -0.98
RPL28-206ENST00000558752 ZNF706Q9Y5V0 76 aaPredicted RBP8.94□□□□□ -0.98
RPL28-206ENST00000558752 ETDCA0A1B0GVM5 59 aa8.93□□□□□ -0.98
RPL28-206ENST00000558752 C20orf202A1L168 122 aa8.93□□□□□ -0.98
RPL28-206ENST00000558752 DDTP30046 118 aa8.93□□□□□ -0.98
RPL28-206ENST00000558752 HIGD2AQ9BW72 106 aa8.93□□□□□ -0.98
RPL28-206ENST00000558752 KRTAP4-16G5E9R7 235 aaPredicted RBP8.92□□□□□ -0.98
RPL28-206ENST00000558752 KRTDAPP60985 99 aa8.92□□□□□ -0.98
RPL28-206ENST00000558752 ADAMTSL4-AS1Q5T5F5 129 aa8.92□□□□□ -0.98
RPL28-206ENST00000558752 ANAPC11Q9NYG5 84 aa8.92□□□□□ -0.98
RPL28-206ENST00000558752 S100A7L2Q5SY68 101 aa8.91□□□□□ -0.98
RPL28-206ENST00000558752 IGLV6-57P01721 117 aa8.9□□□□□ -0.98
RPL28-206ENST00000558752 KRTAP13-2Q52LG2 175 aa8.9□□□□□ -0.98
RPL28-206ENST00000558752 CDIP1Q9H305 208 aa8.9□□□□□ -0.98
RPL28-206ENST00000558752 ZNF815PA8K554 130 aa8.89□□□□□ -0.99
RPL28-206ENST00000558752 LINC00304Q8N9R0 145 aa8.89□□□□□ -0.99
RPL28-206ENST00000558752 SMCR5Q8TEV8 140 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms