RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 FAM229BQ4G0N7 80 aa6.7□□□□□ -1.34
CASC4-205ENST00000558735 TMEM170BQ5T4T1 132 aa6.7□□□□□ -1.34
CASC4-205ENST00000558735 FAM19A1Q7Z5A9 133 aa6.69□□□□□ -1.34
CASC4-205ENST00000558735 PLEKHB2Q96CS7 222 aa6.69□□□□□ -1.34
CASC4-205ENST00000558735 APOC3P02656 99 aa6.68□□□□□ -1.34
CASC4-205ENST00000558735 CHTOPQ9Y3Y2 248 aaKnown RBP6.68□□□□□ -1.34
CASC4-205ENST00000558735 IGKV2D-26A0A0A0MRZ7 120 aa6.67□□□□□ -1.34
CASC4-205ENST00000558735 LINC00158P58513 81 aa6.67□□□□□ -1.34
CASC4-205ENST00000558735 SFTA2Q6UW10 78 aa6.67□□□□□ -1.34
CASC4-205ENST00000558735 LINC00304Q8N9R0 145 aa6.67□□□□□ -1.34
CASC4-205ENST00000558735 RETNLBQ9BQ08 111 aa6.67□□□□□ -1.34
CASC4-205ENST00000558735 A0A0U1RRA0 63 aa6.66□□□□□ -1.34
CASC4-205ENST00000558735 TMEM223A0PJW6 202 aa6.66□□□□□ -1.34
CASC4-205ENST00000558735 YPEL4Q96NS1 127 aa6.66□□□□□ -1.34
CASC4-205ENST00000558735 TRAV12-1A0A0B4J245 112 aa6.65□□□□□ -1.34
CASC4-205ENST00000558735 SNAPINO95295 136 aa6.65□□□□□ -1.34
CASC4-205ENST00000558735 CBLN2Q8IUK8 224 aa6.65□□□□□ -1.34
CASC4-205ENST00000558735 MUC17Q685J3 4493 aa6.65□□□□□ -1.35
CASC4-205ENST00000558735 SVBPQ8N300 66 aa6.64□□□□□ -1.35
CASC4-205ENST00000558735 C3orf22Q8N5N4 141 aa6.64□□□□□ -1.35
CASC4-205ENST00000558735 IFI27L1Q96BM0 104 aa6.64□□□□□ -1.35
CASC4-205ENST00000558735 CHCHD1Q96BP2 118 aaKnown RBP6.64□□□□□ -1.35
CASC4-205ENST00000558735 SMIM13P0DJ93 91 aa6.63□□□□□ -1.35
CASC4-205ENST00000558735 CTAG1AP78358 180 aa6.63□□□□□ -1.35
CASC4-205ENST00000558735 HIGD2AQ9BW72 106 aa6.63□□□□□ -1.35
CASC4-205ENST00000558735 LCE2DQ5TA82 110 aaPredicted RBP6.62□□□□□ -1.35
CASC4-205ENST00000558735 IGLV7-46A0A075B6I9 117 aa6.61□□□□□ -1.35
CASC4-205ENST00000558735 NDUFA5Q16718 116 aa6.61□□□□□ -1.35
CASC4-205ENST00000558735 BOD1L2Q8IYS8 172 aa6.61□□□□□ -1.35
CASC4-205ENST00000558735 FAM19A2Q8N3H0 131 aa6.61□□□□□ -1.35
CASC4-205ENST00000558735 SPRR4Q96PI1 79 aa6.61□□□□□ -1.35
CASC4-205ENST00000558735 ATP6V1G1O75348 118 aa6.6□□□□□ -1.35
CASC4-205ENST00000558735 TPRXLQ17RH7 258 aa6.6□□□□□ -1.35
CASC4-205ENST00000558735 MIR7-3HGQ8N6C7 128 aa6.6□□□□□ -1.35
CASC4-205ENST00000558735 KRTAP4-16G5E9R7 235 aaPredicted RBP6.59□□□□□ -1.35
CASC4-205ENST00000558735 SPRR1AP35321 89 aa6.59□□□□□ -1.35
CASC4-205ENST00000558735 HERV-K104P63124 156 aa6.59□□□□□ -1.35
CASC4-205ENST00000558735 MEIG1Q5JSS6 88 aa6.59□□□□□ -1.35
CASC4-205ENST00000558735 SMCR5Q8TEV8 140 aa6.59□□□□□ -1.35
CASC4-205ENST00000558735 KCNQ1DNQ9H478 68 aa6.59□□□□□ -1.35
CASC4-205ENST00000558735 NDUFA12Q9UI09 145 aa6.59□□□□□ -1.35
CASC4-205ENST00000558735 FSIP2Q5CZC0 6907 aa6.58□□□□□ -1.36
CASC4-205ENST00000558735 PRYO14603 147 aa6.58□□□□□ -1.36
CASC4-205ENST00000558735 NCR3O14931 201 aa6.58□□□□□ -1.36
CASC4-205ENST00000558735 HSBP1O75506 76 aa6.58□□□□□ -1.36
CASC4-205ENST00000558735 SPAG11AQ6PDA7 123 aa6.58□□□□□ -1.36
CASC4-205ENST00000558735 LINC00337Q8N6G1 96 aa6.58□□□□□ -1.36
CASC4-205ENST00000558735 CDIP1Q9H305 208 aa6.58□□□□□ -1.36
CASC4-205ENST00000558735 LINC00587B1AMM8 73 aa6.57□□□□□ -1.36
CASC4-205ENST00000558735 PPDPFQ9H3Y8 114 aa6.57□□□□□ -1.36
CASC4-205ENST00000558735 TRBV10-3A0A0K0K1G6 114 aa6.56□□□□□ -1.36
CASC4-205ENST00000558735 MYMXA0A1B0GTQ4 84 aa6.56□□□□□ -1.36
CASC4-205ENST00000558735 TRGC2P03986 189 aa6.56□□□□□ -1.36
CASC4-205ENST00000558735 LINC00310P59036 64 aa6.56□□□□□ -1.36
CASC4-205ENST00000558735 DAND5Q8N907 189 aa6.56□□□□□ -1.36
CASC4-205ENST00000558735 CRCT1Q9UGL9 99 aa6.56□□□□□ -1.36
CASC4-205ENST00000558735 LOC107984156A0A0G2JMH3 177 aa6.55□□□□□ -1.36
CASC4-205ENST00000558735 H0Y8G0 127 aa6.55□□□□□ -1.36
CASC4-205ENST00000558735 TSPEAR-AS2P59090 65 aa6.55□□□□□ -1.36
CASC4-205ENST00000558735 ARL17AQ8IVW1 177 aa6.55□□□□□ -1.36
CASC4-205ENST00000558735 ZNF706Q9Y5V0 76 aaPredicted RBP6.55□□□□□ -1.36
CASC4-205ENST00000558735 ETDCA0A1B0GVM5 59 aa6.54□□□□□ -1.36
CASC4-205ENST00000558735 LEPROTO15243 131 aa6.54□□□□□ -1.36
CASC4-205ENST00000558735 LEPROTL1O95214 131 aa6.54□□□□□ -1.36
CASC4-205ENST00000558735 C4orf48Q5BLP8 95 aa6.54□□□□□ -1.36
CASC4-205ENST00000558735 Q8NBF4 154 aa6.54□□□□□ -1.36
CASC4-205ENST00000558735 MAP1LC3CQ9BXW4 147 aa6.54□□□□□ -1.36
CASC4-205ENST00000558735 B5MCH6 92 aa6.53□□□□□ -1.36
CASC4-205ENST00000558735 SERF1AO75920 110 aa6.53□□□□□ -1.36
CASC4-205ENST00000558735 ERC2-IT1O76042 136 aa6.53□□□□□ -1.36
CASC4-205ENST00000558735 LINC00483Q53H64 154 aa6.53□□□□□ -1.36
CASC4-205ENST00000558735 TRBV10-2A0A0K0K1G8 114 aa6.51□□□□□ -1.37
CASC4-205ENST00000558735 J3QQQ9 107 aa6.51□□□□□ -1.37
CASC4-205ENST00000558735 FABP4P15090 132 aa6.51□□□□□ -1.37
CASC4-205ENST00000558735 DDTP30046 118 aa6.51□□□□□ -1.37
CASC4-205ENST00000558735 GAGE2AQ6NT46 116 aa6.51□□□□□ -1.37
CASC4-205ENST00000558735 FP248Q71RG6 208 aaPredicted RBP6.51□□□□□ -1.37
CASC4-205ENST00000558735 PMCHL2Q9BQD1 86 aa6.51□□□□□ -1.37
CASC4-205ENST00000558735 DPM2O94777 84 aa6.5□□□□□ -1.37
CASC4-205ENST00000558735 SPINK1P00995 79 aa6.5□□□□□ -1.37
CASC4-205ENST00000558735 PLNP26678 52 aa6.5□□□□□ -1.37
CASC4-205ENST00000558735 Q9BRP9 147 aa6.5□□□□□ -1.37
CASC4-205ENST00000558735 EIF4EBP3O60516 100 aaPredicted RBP6.49□□□□□ -1.37
CASC4-205ENST00000558735 KRTAP13-3Q3SY46 172 aa6.49□□□□□ -1.37
CASC4-205ENST00000558735 HSPB8Q9UJY1 196 aa6.49□□□□□ -1.37
CASC4-205ENST00000558735 COLCA2A8K830 154 aa6.48□□□□□ -1.37
CASC4-205ENST00000558735 IGKCP01834 107 aa6.48□□□□□ -1.37
CASC4-205ENST00000558735 S100A12P80511 92 aa6.48□□□□□ -1.37
CASC4-205ENST00000558735 ADAMTSL4-AS1Q5T5F5 129 aa6.48□□□□□ -1.37
CASC4-205ENST00000558735 SSBP3-AS1Q7Z2R9 100 aa6.48□□□□□ -1.37
CASC4-205ENST00000558735 NDUFC2O95298 119 aa6.47□□□□□ -1.37
CASC4-205ENST00000558735 IGLV6-57P01721 117 aa6.47□□□□□ -1.37
CASC4-205ENST00000558735 LGALS3P17931 250 aaKnown RBP6.47□□□□□ -1.37
CASC4-205ENST00000558735 NMUP48645 174 aa6.47□□□□□ -1.37
CASC4-205ENST00000558735 HERVK_113P61574 105 aa6.47□□□□□ -1.37
CASC4-205ENST00000558735 SOSTDC1Q6X4U4 206 aa6.47□□□□□ -1.37
CASC4-205ENST00000558735 Q6ZRX8 168 aa6.47□□□□□ -1.37
CASC4-205ENST00000558735 SLC7A5P1Q8MH63 180 aa6.47□□□□□ -1.37
CASC4-205ENST00000558735 SPANXB1Q9NS25 103 aaPredicted RBP6.47□□□□□ -1.37
CASC4-205ENST00000558735 IGLV9-49A0A0B4J1Y8 123 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms