RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 A0A096LNI7 61 aa9.53□□□□□ -0.88
VPS18-202ENST00000558474 KRTAP10-2P60368 255 aa9.53□□□□□ -0.88
VPS18-202ENST00000558474 NPC2P61916 151 aa9.53□□□□□ -0.88
VPS18-202ENST00000558474 C9orf129Q5T035 196 aaKnown RBP9.53□□□□□ -0.88
VPS18-202ENST00000558474 BVES-AS1Q5T3Y7 98 aa9.53□□□□□ -0.88
VPS18-202ENST00000558474 XAGE1AQ9HD64 81 aa9.53□□□□□ -0.88
VPS18-202ENST00000558474 FAT2Q9NYQ8 4349 aa9.53□□□□□ -0.88
VPS18-202ENST00000558474 A0A1B0GVY2 172 aa9.52□□□□□ -0.89
VPS18-202ENST00000558474 A4D1N5 150 aa9.51□□□□□ -0.89
VPS18-202ENST00000558474 EIF4EBP3O60516 100 aaPredicted RBP9.51□□□□□ -0.89
VPS18-202ENST00000558474 FXYD2P54710 66 aa9.51□□□□□ -0.89
VPS18-202ENST00000558474 IGLV5-37A0A075B6J1 123 aa9.5□□□□□ -0.89
VPS18-202ENST00000558474 TRBV10-2A0A0K0K1G8 114 aa9.5□□□□□ -0.89
VPS18-202ENST00000558474 A6NDN8 102 aa9.5□□□□□ -0.89
VPS18-202ENST00000558474 HINT1P49773 126 aaPredicted RBP9.5□□□□□ -0.89
VPS18-202ENST00000558474 HECTD4Q9Y4D8 3996 aa9.5□□□□□ -0.89
VPS18-202ENST00000558474 A0A0B4J2C4 111 aa9.49□□□□□ -0.89
VPS18-202ENST00000558474 IGKV2-24A0A0C4DH68 120 aa9.48□□□□□ -0.89
VPS18-202ENST00000558474 A0A1B0GWB2 263 aa9.48□□□□□ -0.89
VPS18-202ENST00000558474 VPREB1P12018 145 aa9.48□□□□□ -0.89
VPS18-202ENST00000558474 SPACA4Q8TDM5 124 aa9.48□□□□□ -0.89
VPS18-202ENST00000558474 PKD1P98161 4303 aa9.48□□□□□ -0.89
VPS18-202ENST00000558474 DNAH11Q96DT5 4516 aa9.47□□□□□ -0.89
VPS18-202ENST00000558474 TRAV13-2A0A0B4J235 113 aa9.47□□□□□ -0.89
VPS18-202ENST00000558474 EPM2AB3EWF7 344 aa9.47□□□□□ -0.89
VPS18-202ENST00000558474 CFC1BP0CG36 223 aa9.47□□□□□ -0.89
VPS18-202ENST00000558474 CFC1P0CG37 223 aa9.47□□□□□ -0.89
VPS18-202ENST00000558474 LINC01620Q4KN68 170 aa9.47□□□□□ -0.89
VPS18-202ENST00000558474 NHP2Q9NX24 153 aaKnown RBP9.46□□□□□ -0.9
VPS18-202ENST00000558474 IGKV2-28A0A075B6P5 120 aa9.45□□□□□ -0.9
VPS18-202ENST00000558474 M0R378 163 aa9.45□□□□□ -0.9
VPS18-202ENST00000558474 IGKV2D-28P01615 120 aa9.45□□□□□ -0.9
VPS18-202ENST00000558474 FUSP35637 526 aaKnown RBP eCLIP9.45□□□□□ -0.9
VPS18-202ENST00000558474 NKAPP1Q8N9T2 125 aa9.45□□□□□ -0.9
VPS18-202ENST00000558474 RAB37Q96AX2 223 aa9.45□□□□□ -0.9
VPS18-202ENST00000558474 CHTF8P0CG12 524 aa9.44□□□□□ -0.9
VPS18-202ENST00000558474 Q6ZSA8 131 aa9.44□□□□□ -0.9
VPS18-202ENST00000558474 Q8NDZ9 215 aa9.44□□□□□ -0.9
VPS18-202ENST00000558474 SNHG12Q9BXW3 62 aa9.44□□□□□ -0.9
VPS18-202ENST00000558474 CBY1Q9Y3M2 126 aa9.44□□□□□ -0.9
VPS18-202ENST00000558474 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.44□□□□□ -0.9
VPS18-202ENST00000558474 BATFQ16520 125 aa9.43□□□□□ -0.9
VPS18-202ENST00000558474 LBHQ53QV2 105 aaPredicted RBP9.43□□□□□ -0.9
VPS18-202ENST00000558474 SERTAD4-AS1Q5TG53 156 aa9.43□□□□□ -0.9
VPS18-202ENST00000558474 TMEM126AQ9H061 195 aa9.43□□□□□ -0.9
VPS18-202ENST00000558474 PRO1854Q9UHT4 67 aa9.43□□□□□ -0.9
VPS18-202ENST00000558474 A0A1W2PNN7 141 aa9.42□□□□□ -0.9
VPS18-202ENST00000558474 FAM168BA1KXE4 195 aa9.42□□□□□ -0.9
VPS18-202ENST00000558474 KRTAP10-1P60331 282 aa9.42□□□□□ -0.9
VPS18-202ENST00000558474 LINC00337Q8N6G1 96 aa9.42□□□□□ -0.9
VPS18-202ENST00000558474 DPH3Q96FX2 82 aa9.42□□□□□ -0.9
VPS18-202ENST00000558474 PLAC8Q9NZF1 115 aa9.42□□□□□ -0.9
VPS18-202ENST00000558474 C22orf24Q9Y442 160 aa9.42□□□□□ -0.9
VPS18-202ENST00000558474 PANO1I0J062 215 aa9.41□□□□□ -0.9
VPS18-202ENST00000558474 NCR3O14931 201 aa9.41□□□□□ -0.9
VPS18-202ENST00000558474 PRR3P79522 188 aaKnown RBP9.41□□□□□ -0.9
VPS18-202ENST00000558474 S100A7L2Q5SY68 101 aa9.41□□□□□ -0.9
VPS18-202ENST00000558474 FAM19A5Q7Z5A7 132 aaPredicted RBP9.41□□□□□ -0.9
VPS18-202ENST00000558474 MRPL55Q7Z7F7 128 aaKnown RBP9.41□□□□□ -0.9
VPS18-202ENST00000558474 KRTAP7-1Q8IUC3 87 aa9.41□□□□□ -0.9
VPS18-202ENST00000558474 A0A087WYN8 130 aa9.4□□□□□ -0.9
VPS18-202ENST00000558474 M0QXV9 152 aa9.4□□□□□ -0.9
VPS18-202ENST00000558474 IGLV6-57P01721 117 aa9.4□□□□□ -0.9
VPS18-202ENST00000558474 COL5A1-AS1Q5SY13 56 aa9.4□□□□□ -0.9
VPS18-202ENST00000558474 OR13C6PQ8NH95 151 aa9.39□□□□□ -0.91
VPS18-202ENST00000558474 RPL13AP40429 203 aaKnown RBP9.38□□□□□ -0.91
VPS18-202ENST00000558474 C7orf33Q8WU49 177 aa9.38□□□□□ -0.91
VPS18-202ENST00000558474 DNAH5Q8TE73 4624 aa9.38□□□□□ -0.91
VPS18-202ENST00000558474 K7ERJ3 54 aa9.37□□□□□ -0.91
VPS18-202ENST00000558474 LINC00167Q96N53 147 aa9.37□□□□□ -0.91
VPS18-202ENST00000558474 RYR3Q15413 4870 aa9.37□□□□□ -0.91
VPS18-202ENST00000558474 IGLV1-50A0A075B6I6 118 aa9.36□□□□□ -0.91
VPS18-202ENST00000558474 TRBV10-3A0A0K0K1G6 114 aa9.36□□□□□ -0.91
VPS18-202ENST00000558474 FAM30AQ9NZY2 134 aa9.36□□□□□ -0.91
VPS18-202ENST00000558474 KCNQ1DNQ9H478 68 aa9.35□□□□□ -0.91
VPS18-202ENST00000558474 PRYO14603 147 aa9.34□□□□□ -0.91
VPS18-202ENST00000558474 RPL28P46779 137 aaKnown RBP9.34□□□□□ -0.91
VPS18-202ENST00000558474 DNAH8Q96JB1 4490 aa9.33□□□□□ -0.92
VPS18-202ENST00000558474 TRAV23DV6A0A075B6W5 121 aa9.33□□□□□ -0.92
VPS18-202ENST00000558474 Q1RN00 199 aa9.33□□□□□ -0.92
VPS18-202ENST00000558474 PHF5AQ7RTV0 110 aaKnown RBP9.33□□□□□ -0.92
VPS18-202ENST00000558474 CIRBP-AS1Q8TBR5 109 aa9.33□□□□□ -0.92
VPS18-202ENST00000558474 GAGE10A6NGK3 116 aa9.32□□□□□ -0.92
VPS18-202ENST00000558474 TAX1BP3O14907 124 aa9.32□□□□□ -0.92
VPS18-202ENST00000558474 TSPAN13O95857 204 aa9.32□□□□□ -0.92
VPS18-202ENST00000558474 SCXQ7RTU7 201 aa9.32□□□□□ -0.92
VPS18-202ENST00000558474 SMIM11BQ8TCY0 68 aa9.32□□□□□ -0.92
VPS18-202ENST00000558474 TRBV7-6A0A0J9YX20 115 aa9.31□□□□□ -0.92
VPS18-202ENST00000558474 C9orf118A6NHY6 69 aa9.31□□□□□ -0.92
VPS18-202ENST00000558474 UBE2BP63146 152 aa9.31□□□□□ -0.92
VPS18-202ENST00000558474 RPL37AP8A6NKH3 93 aa9.3□□□□□ -0.92
VPS18-202ENST00000558474 H7C2G1 150 aa9.3□□□□□ -0.92
VPS18-202ENST00000558474 ZNF73O43830 326 aaPredicted RBP9.3□□□□□ -0.92
VPS18-202ENST00000558474 COX6CP09669 75 aa9.3□□□□□ -0.92
VPS18-202ENST00000558474 SPRR1AP35321 89 aa9.3□□□□□ -0.92
VPS18-202ENST00000558474 VAMP3Q15836 100 aa9.29□□□□□ -0.92
VPS18-202ENST00000558474 DIRC1Q969H9 104 aa9.29□□□□□ -0.92
VPS18-202ENST00000558474 PSMB2P49721 201 aa9.28□□□□□ -0.92
VPS18-202ENST00000558474 LYRM7Q5U5X0 104 aa9.28□□□□□ -0.92
VPS18-202ENST00000558474 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms