RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 LINC00310P59036 64 aa5.25□□□□□ -1.57
TPM1-213ENST00000558400 REG3GQ6UW15 175 aa5.25□□□□□ -1.57
TPM1-213ENST00000558400 FAM19A5Q7Z5A7 132 aaPredicted RBP5.25□□□□□ -1.57
TPM1-213ENST00000558400 TP73-AS1Q9UF72 201 aa5.25□□□□□ -1.57
TPM1-213ENST00000558400 PSORS1C2Q9UIG4 136 aa5.25□□□□□ -1.57
TPM1-213ENST00000558400 LINC00587B1AMM8 73 aa5.24□□□□□ -1.57
TPM1-213ENST00000558400 M0QXV9 152 aa5.24□□□□□ -1.57
TPM1-213ENST00000558400 NUPR1O60356 82 aa5.24□□□□□ -1.57
TPM1-213ENST00000558400 UBE2BP63146 152 aa5.24□□□□□ -1.57
TPM1-213ENST00000558400 C1orf137Q5JT78 98 aa5.24□□□□□ -1.57
TPM1-213ENST00000558400 XAGE1AQ9HD64 81 aa5.24□□□□□ -1.57
TPM1-213ENST00000558400 C22orf24Q9Y442 160 aa5.24□□□□□ -1.57
TPM1-213ENST00000558400 TMEM223A0PJW6 202 aa5.23□□□□□ -1.57
TPM1-213ENST00000558400 HIST1H2BLQ99880 126 aa5.23□□□□□ -1.57
TPM1-213ENST00000558400 IGLV7-43P04211 117 aa5.22□□□□□ -1.57
TPM1-213ENST00000558400 PLNP26678 52 aa5.22□□□□□ -1.57
TPM1-213ENST00000558400 PFN2P35080 140 aa5.22□□□□□ -1.57
TPM1-213ENST00000558400 HERV-K104P63124 156 aa5.22□□□□□ -1.57
TPM1-213ENST00000558400 COA6Q5JTJ3 125 aaKnown RBP5.22□□□□□ -1.57
TPM1-213ENST00000558400 KRTAP7-1Q8IUC3 87 aa5.22□□□□□ -1.57
TPM1-213ENST00000558400 MAP1LC3CQ9BXW4 147 aa5.22□□□□□ -1.57
TPM1-213ENST00000558400 ERG28Q9UKR5 140 aa5.22□□□□□ -1.57
TPM1-213ENST00000558400 H0Y8G0 127 aa5.21□□□□□ -1.58
TPM1-213ENST00000558400 RPL24P83731 157 aaKnown RBP5.21□□□□□ -1.58
TPM1-213ENST00000558400 MRPL55Q7Z7F7 128 aaKnown RBP5.21□□□□□ -1.58
TPM1-213ENST00000558400 DIRC1Q969H9 104 aa5.21□□□□□ -1.58
TPM1-213ENST00000558400 ZNF625Q96I27 306 aaPredicted RBP5.21□□□□□ -1.58
TPM1-213ENST00000558400 LINC01600Q96MT4 127 aa5.21□□□□□ -1.58
TPM1-213ENST00000558400 IGLV5-37A0A075B6J1 123 aa5.2□□□□□ -1.58
TPM1-213ENST00000558400 MYMXA0A1B0GTQ4 84 aa5.2□□□□□ -1.58
TPM1-213ENST00000558400 DPM2O94777 84 aa5.2□□□□□ -1.58
TPM1-213ENST00000558400 LINC00158P58513 81 aa5.2□□□□□ -1.58
TPM1-213ENST00000558400 HERVK_113P61574 105 aa5.2□□□□□ -1.58
TPM1-213ENST00000558400 LINC00518Q8N0U6 118 aa5.2□□□□□ -1.58
TPM1-213ENST00000558400 NKAPP1Q8N9T2 125 aa5.2□□□□□ -1.58
TPM1-213ENST00000558400 PLEKHB2Q96CS7 222 aa5.2□□□□□ -1.58
TPM1-213ENST00000558400 C12orf57Q99622 126 aa5.2□□□□□ -1.58
TPM1-213ENST00000558400 IGKCP01834 107 aa5.19□□□□□ -1.58
TPM1-213ENST00000558400 SMIM6P0DI80 62 aa5.19□□□□□ -1.58
TPM1-213ENST00000558400 SND1-IT1Q9HBX3 110 aa5.19□□□□□ -1.58
TPM1-213ENST00000558400 LEPROTO15243 131 aa5.18□□□□□ -1.58
TPM1-213ENST00000558400 KRTAP11-1Q8IUC1 163 aa5.18□□□□□ -1.58
TPM1-213ENST00000558400 LINC00167Q96N53 147 aa5.18□□□□□ -1.58
TPM1-213ENST00000558400 NDUFA12Q9UI09 145 aa5.18□□□□□ -1.58
TPM1-213ENST00000558400 RNF213Q63HN8 5207 aa5.18□□□□□ -1.58
TPM1-213ENST00000558400 LRP1Q07954 4544 aaKnown RBP5.18□□□□□ -1.58
TPM1-213ENST00000558400 SYS1-DBNDD2H3BUS1 97 aa5.17□□□□□ -1.58
TPM1-213ENST00000558400 ZNF861PO60384 105 aa5.17□□□□□ -1.58
TPM1-213ENST00000558400 MT1HL1P0DM35 61 aa5.17□□□□□ -1.58
TPM1-213ENST00000558400 NMUP48645 174 aa5.17□□□□□ -1.58
TPM1-213ENST00000558400 KRTDAPP60985 99 aa5.17□□□□□ -1.58
TPM1-213ENST00000558400 PYY3Q5JQD4 70 aa5.17□□□□□ -1.58
TPM1-213ENST00000558400 MEIG1Q5JSS6 88 aa5.17□□□□□ -1.58
TPM1-213ENST00000558400 PET117Q6UWS5 81 aa5.17□□□□□ -1.58
TPM1-213ENST00000558400 RPL37AP8A6NKH3 93 aa5.16□□□□□ -1.58
TPM1-213ENST00000558400 PCP4L1A6NKN8 68 aa5.16□□□□□ -1.58
TPM1-213ENST00000558400 H0Y9J4 135 aa5.16□□□□□ -1.58
TPM1-213ENST00000558400 J3QQQ9 107 aa5.16□□□□□ -1.58
TPM1-213ENST00000558400 BCE1O60756 84 aa5.16□□□□□ -1.58
TPM1-213ENST00000558400 LGALS3P17931 250 aaKnown RBP5.16□□□□□ -1.58
TPM1-213ENST00000558400 RPL28P46779 137 aaKnown RBP5.16□□□□□ -1.58
TPM1-213ENST00000558400 KRTAP10-8P60410 259 aa5.16□□□□□ -1.58
TPM1-213ENST00000558400 PKHD1L1Q86WI1 4243 aa5.16□□□□□ -1.58
TPM1-213ENST00000558400 IGLV1-50A0A075B6I6 118 aa5.15□□□□□ -1.59
TPM1-213ENST00000558400 SCGB1D1O95968 90 aa5.15□□□□□ -1.59
TPM1-213ENST00000558400 SMIM13P0DJ93 91 aa5.15□□□□□ -1.59
TPM1-213ENST00000558400 VPREB1P12018 145 aa5.15□□□□□ -1.59
TPM1-213ENST00000558400 PMCHL2Q9BQD1 86 aa5.15□□□□□ -1.59
TPM1-213ENST00000558400 LRP2P98164 4655 aa5.15□□□□□ -1.59
TPM1-213ENST00000558400 FAT3Q8TDW7 4589 aa5.14□□□□□ -1.59
TPM1-213ENST00000558400 IGKV2D-26A0A0A0MRZ7 120 aa5.14□□□□□ -1.59
TPM1-213ENST00000558400 A0A0U1RRA0 63 aa5.14□□□□□ -1.59
TPM1-213ENST00000558400 GAGE10A6NGK3 116 aa5.14□□□□□ -1.59
TPM1-213ENST00000558400 E9PLD3 99 aa5.14□□□□□ -1.59
TPM1-213ENST00000558400 M0R378 163 aa5.14□□□□□ -1.59
TPM1-213ENST00000558400 LINC01545Q5VT33 79 aa5.14□□□□□ -1.59
TPM1-213ENST00000558400 MIR7-3HGQ8N6C7 128 aa5.14□□□□□ -1.59
TPM1-213ENST00000558400 LOC107984156A0A0G2JMH3 177 aa5.13□□□□□ -1.59
TPM1-213ENST00000558400 C3orf79P0CE67 100 aa5.13□□□□□ -1.59
TPM1-213ENST00000558400 JOSD1Q15040 202 aaPredicted RBP5.13□□□□□ -1.59
TPM1-213ENST00000558400 ARL17AQ8IVW1 177 aa5.13□□□□□ -1.59
TPM1-213ENST00000558400 BOD1L2Q8IYS8 172 aa5.13□□□□□ -1.59
TPM1-213ENST00000558400 IGKV2-28A0A075B6P5 120 aa5.12□□□□□ -1.59
TPM1-213ENST00000558400 C20orf202A1L168 122 aa5.12□□□□□ -1.59
TPM1-213ENST00000558400 IGKV2D-28P01615 120 aa5.12□□□□□ -1.59
TPM1-213ENST00000558400 RPL13AP40429 203 aaKnown RBP5.12□□□□□ -1.59
TPM1-213ENST00000558400 UBE2AP49459 152 aa5.12□□□□□ -1.59
TPM1-213ENST00000558400 S100A12P80511 92 aa5.12□□□□□ -1.59
TPM1-213ENST00000558400 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
TPM1-213ENST00000558400 ATOH7Q8N100 152 aa5.12□□□□□ -1.59
TPM1-213ENST00000558400 MIEN1Q9BRT3 115 aa5.12□□□□□ -1.59
TPM1-213ENST00000558400 PRO1933Q9H354 126 aa5.12□□□□□ -1.59
TPM1-213ENST00000558400 TSPEAR-AS2P59090 65 aa5.11□□□□□ -1.59
TPM1-213ENST00000558400 TRBV10-2A0A0K0K1G8 114 aa5.1□□□□□ -1.59
TPM1-213ENST00000558400 TMEM126AQ9H061 195 aa5.1□□□□□ -1.59
TPM1-213ENST00000558400 A0A0J9YXY3 114 aa5.09□□□□□ -1.59
TPM1-213ENST00000558400 NDUFC2O95298 119 aa5.09□□□□□ -1.59
TPM1-213ENST00000558400 KRTAP1-4P0C5Y4 121 aa5.09□□□□□ -1.59
TPM1-213ENST00000558400 FAM19A1Q7Z5A9 133 aa5.09□□□□□ -1.59
TPM1-213ENST00000558400 PRR26Q8N8Z3 221 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms