RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 LINC00158P58513 81 aa7.06□□□□□ -1.28
HERC1-202ENST00000558324 RPL24P83731 157 aaKnown RBP7.06□□□□□ -1.28
HERC1-202ENST00000558324 PRR4Q16378 134 aa7.06□□□□□ -1.28
HERC1-202ENST00000558324 SFTA2Q6UW10 78 aa7.06□□□□□ -1.28
HERC1-202ENST00000558324 FAM19A2Q8N3H0 131 aa7.06□□□□□ -1.28
HERC1-202ENST00000558324 Q8NDZ9 215 aa7.06□□□□□ -1.28
HERC1-202ENST00000558324 TMEM223A0PJW6 202 aa7.05□□□□□ -1.28
HERC1-202ENST00000558324 H0Y8G0 127 aa7.05□□□□□ -1.28
HERC1-202ENST00000558324 CRYGAP11844 174 aa7.05□□□□□ -1.28
HERC1-202ENST00000558324 FAM19A1Q7Z5A9 133 aa7.05□□□□□ -1.28
HERC1-202ENST00000558324 KRTAP13-1Q8IUC0 172 aa7.05□□□□□ -1.28
HERC1-202ENST00000558324 TRAV12-1A0A0B4J245 112 aa7.04□□□□□ -1.28
HERC1-202ENST00000558324 TYMSOSQ8TAI1 123 aa7.04□□□□□ -1.28
HERC1-202ENST00000558324 TMEM126AQ9H061 195 aa7.04□□□□□ -1.28
HERC1-202ENST00000558324 TRGC2P03986 189 aa7.03□□□□□ -1.28
HERC1-202ENST00000558324 TMA7Q9Y2S6 64 aaKnown RBP7.03□□□□□ -1.28
HERC1-202ENST00000558324 M0R378 163 aa7.02□□□□□ -1.29
HERC1-202ENST00000558324 SMIM13P0DJ93 91 aa7.02□□□□□ -1.29
HERC1-202ENST00000558324 MEIG1Q5JSS6 88 aa7.02□□□□□ -1.29
HERC1-202ENST00000558324 KRTAP13-2Q52LG2 175 aa7.01□□□□□ -1.29
HERC1-202ENST00000558324 SERF1AO75920 110 aa7□□□□□ -1.29
HERC1-202ENST00000558324 NCR3O14931 201 aa6.99□□□□□ -1.29
HERC1-202ENST00000558324 LEPROTL1O95214 131 aa6.99□□□□□ -1.29
HERC1-202ENST00000558324 LINC00310P59036 64 aa6.99□□□□□ -1.29
HERC1-202ENST00000558324 BOD1L2Q8IYS8 172 aa6.99□□□□□ -1.29
HERC1-202ENST00000558324 MIR7-3HGQ8N6C7 128 aa6.99□□□□□ -1.29
HERC1-202ENST00000558324 HIGD2AQ9BW72 106 aa6.99□□□□□ -1.29
HERC1-202ENST00000558324 NDUFA12Q9UI09 145 aa6.99□□□□□ -1.29
HERC1-202ENST00000558324 IGKV2D-26A0A0A0MRZ7 120 aa6.98□□□□□ -1.29
HERC1-202ENST00000558324 FAM229BQ4G0N7 80 aa6.98□□□□□ -1.29
HERC1-202ENST00000558324 FABP4P15090 132 aa6.97□□□□□ -1.29
HERC1-202ENST00000558324 TSPEAR-AS2P59090 65 aa6.97□□□□□ -1.29
HERC1-202ENST00000558324 HERV-K104P63124 156 aa6.97□□□□□ -1.29
HERC1-202ENST00000558324 PMCHL2Q9BQD1 86 aa6.97□□□□□ -1.29
HERC1-202ENST00000558324 MYMXA0A1B0GTQ4 84 aa6.96□□□□□ -1.3
HERC1-202ENST00000558324 LINC00304Q8N9R0 145 aa6.96□□□□□ -1.3
HERC1-202ENST00000558324 PLEKHB2Q96CS7 222 aa6.96□□□□□ -1.3
HERC1-202ENST00000558324 RETNLBQ9BQ08 111 aa6.96□□□□□ -1.3
HERC1-202ENST00000558324 PLNP26678 52 aa6.95□□□□□ -1.3
HERC1-202ENST00000558324 DAND5Q8N907 189 aa6.95□□□□□ -1.3
HERC1-202ENST00000558324 MAP1LC3CQ9BXW4 147 aa6.95□□□□□ -1.3
HERC1-202ENST00000558324 HSPB8Q9UJY1 196 aa6.95□□□□□ -1.3
HERC1-202ENST00000558324 LINC00587B1AMM8 73 aa6.94□□□□□ -1.3
HERC1-202ENST00000558324 LEPROTO15243 131 aa6.94□□□□□ -1.3
HERC1-202ENST00000558324 DPM2O94777 84 aa6.94□□□□□ -1.3
HERC1-202ENST00000558324 C3orf22Q8N5N4 141 aa6.94□□□□□ -1.3
HERC1-202ENST00000558324 LOC105371267A0A1B0GV96 52 aa6.93□□□□□ -1.3
HERC1-202ENST00000558324 COLCA2A8K830 154 aa6.93□□□□□ -1.3
HERC1-202ENST00000558324 PRYO14603 147 aa6.93□□□□□ -1.3
HERC1-202ENST00000558324 HERVK_113P61574 105 aa6.93□□□□□ -1.3
HERC1-202ENST00000558324 TRBV10-3A0A0K0K1G6 114 aa6.92□□□□□ -1.3
HERC1-202ENST00000558324 J3QQQ9 107 aa6.92□□□□□ -1.3
HERC1-202ENST00000558324 IGKCP01834 107 aa6.92□□□□□ -1.3
HERC1-202ENST00000558324 SPRR4Q96PI1 79 aa6.92□□□□□ -1.3
HERC1-202ENST00000558324 ETDCA0A1B0GVM5 59 aa6.91□□□□□ -1.3
HERC1-202ENST00000558324 LGALS3P17931 250 aaKnown RBP6.91□□□□□ -1.3
HERC1-202ENST00000558324 KCNQ1DNQ9H478 68 aa6.91□□□□□ -1.3
HERC1-202ENST00000558324 SPRR1AP35321 89 aa6.9□□□□□ -1.3
HERC1-202ENST00000558324 LINC00337Q8N6G1 96 aa6.9□□□□□ -1.3
HERC1-202ENST00000558324 PPDPFQ9H3Y8 114 aa6.9□□□□□ -1.3
HERC1-202ENST00000558324 ZNF706Q9Y5V0 76 aaPredicted RBP6.9□□□□□ -1.3
HERC1-202ENST00000558324 S100A12P80511 92 aa6.89□□□□□ -1.31
HERC1-202ENST00000558324 SMCR5Q8TEV8 140 aa6.89□□□□□ -1.31
HERC1-202ENST00000558324 MIEN1Q9BRT3 115 aa6.89□□□□□ -1.31
HERC1-202ENST00000558324 KRTAP4-16G5E9R7 235 aaPredicted RBP6.88□□□□□ -1.31
HERC1-202ENST00000558324 DDTP30046 118 aa6.88□□□□□ -1.31
HERC1-202ENST00000558324 NMUP48645 174 aa6.88□□□□□ -1.31
HERC1-202ENST00000558324 NPC2P61916 151 aa6.88□□□□□ -1.31
HERC1-202ENST00000558324 LOC107984156A0A0G2JMH3 177 aa6.86□□□□□ -1.31
HERC1-202ENST00000558324 TRBV10-2A0A0K0K1G8 114 aa6.86□□□□□ -1.31
HERC1-202ENST00000558324 S100A7L2Q5SY68 101 aa6.86□□□□□ -1.31
HERC1-202ENST00000558324 ARL17AQ8IVW1 177 aa6.86□□□□□ -1.31
HERC1-202ENST00000558324 SPANXB1Q9NS25 103 aaPredicted RBP6.86□□□□□ -1.31
HERC1-202ENST00000558324 IGLV7-46A0A075B6I9 117 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 A0A0J9YXY3 114 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 B5MCH6 92 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 HIST1H2BKO60814 126 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 HIST1H2BJP06899 126 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 HIST1H2BOP23527 126 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 HIST1H2BBP33778 126 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 HIST1H2BDP58876 126 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 HIST1H2BCP62807 126 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 HIST2H2BEQ16778 126 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.85□□□□□ -1.31
HERC1-202ENST00000558324 GAGE2AQ6NT46 116 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 SOSTDC1Q6X4U4 206 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 Q8NBF4 154 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 HIST1H2BHQ93079 126 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 HIST1H2BNQ99877 126 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 HIST1H2BMQ99879 126 aa6.85□□□□□ -1.31
HERC1-202ENST00000558324 E9PLD3 99 aa6.84□□□□□ -1.31
HERC1-202ENST00000558324 SYS1-DBNDD2H3BUS1 97 aa6.84□□□□□ -1.31
HERC1-202ENST00000558324 EIF4EBP3O60516 100 aaPredicted RBP6.84□□□□□ -1.31
HERC1-202ENST00000558324 ERC2-IT1O76042 136 aa6.84□□□□□ -1.31
HERC1-202ENST00000558324 C4orf48Q5BLP8 95 aa6.84□□□□□ -1.31
HERC1-202ENST00000558324 ADAMTSL4-AS1Q5T5F5 129 aa6.84□□□□□ -1.31
HERC1-202ENST00000558324 SPAG11AQ6PDA7 123 aa6.84□□□□□ -1.31
HERC1-202ENST00000558324 MUC2Q02817 5179 aa6.83□□□□□ -1.32
HERC1-202ENST00000558324 Q9BRP9 147 aa6.83□□□□□ -1.32
HERC1-202ENST00000558324 CDIP1Q9H305 208 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms