RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 HIST1H2BBP33778 126 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 POLR2KP53803 58 aaKnown RBP3.03□□□□□ -1.92
SPG11-208ENST00000558155 FOXA3P55318 350 aaPredicted RBP3.03□□□□□ -1.92
SPG11-208ENST00000558155 HIST1H2BDP58876 126 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 HIST1H2BCP62807 126 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 ADIRFQ15847 76 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 HIST2H2BEQ16778 126 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.03□□□□□ -1.92
SPG11-208ENST00000558155 UNQ6190/PRO20217Q6UXQ8 127 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 Q6ZN92 141 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 LINC00173Q6ZV60 143 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 FAM231DQ6ZW35 169 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 HIST1H2BHQ93079 126 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 HIST1H2BNQ99877 126 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 HIST1H2BMQ99879 126 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 SMDT1Q9H4I9 107 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 MANBALQ9NQG1 85 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 A0A087X002 238 aa3.02□□□□□ -1.93
SPG11-208ENST00000558155 TRBV27A0A0K0K1C4 114 aa3.02□□□□□ -1.93
SPG11-208ENST00000558155 ADCYAP1P18509 176 aa3.02□□□□□ -1.93
SPG11-208ENST00000558155 RPL28P46779 137 aaKnown RBP3.02□□□□□ -1.93
SPG11-208ENST00000558155 ZNF345Q14585 488 aa3.02□□□□□ -1.93
SPG11-208ENST00000558155 C4orf26Q17RF5 130 aa3.02□□□□□ -1.93
SPG11-208ENST00000558155 RNASE13Q5GAN3 156 aaKnown RBP3.02□□□□□ -1.93
SPG11-208ENST00000558155 C10orf25Q5T742 122 aa3.02□□□□□ -1.93
SPG11-208ENST00000558155 TEX43Q6ZNM6 134 aa3.02□□□□□ -1.93
SPG11-208ENST00000558155 KRTAP7-1Q8IUC3 87 aa3.02□□□□□ -1.93
SPG11-208ENST00000558155 LINC00337Q8N6G1 96 aa3.02□□□□□ -1.93
SPG11-208ENST00000558155 RETNLBQ9BQ08 111 aa3.02□□□□□ -1.93
SPG11-208ENST00000558155 GNG13Q9P2W3 67 aa3.02□□□□□ -1.93
SPG11-208ENST00000558155 C6orf48Q9UBA6 75 aa3.02□□□□□ -1.93
SPG11-208ENST00000558155 UBE2D4Q9Y2X8 147 aa3.02□□□□□ -1.93
SPG11-208ENST00000558155 IGHV3OR16-9A0A0B4J2B5 98 aa3.01□□□□□ -1.93
SPG11-208ENST00000558155 TRBV30A0A0K0K1B3 111 aa3.01□□□□□ -1.93
SPG11-208ENST00000558155 PPP1R17O96001 155 aa3.01□□□□□ -1.93
SPG11-208ENST00000558155 LINC00304Q8N9R0 145 aa3.01□□□□□ -1.93
SPG11-208ENST00000558155 KIR2DL4Q99706 377 aa3.01□□□□□ -1.93
SPG11-208ENST00000558155 TIMM21Q9BVV7 248 aa3.01□□□□□ -1.93
SPG11-208ENST00000558155 RNASE7Q9H1E1 156 aaKnown RBP3.01□□□□□ -1.93
SPG11-208ENST00000558155 C22orf24Q9Y442 160 aa3.01□□□□□ -1.93
SPG11-208ENST00000558155 A8MWL6 223 aa3□□□□□ -1.93
SPG11-208ENST00000558155 NDUFC2-KCTD14E9PQ53 114 aa3□□□□□ -1.93
SPG11-208ENST00000558155 IFITM1P13164 125 aa3□□□□□ -1.93
SPG11-208ENST00000558155 MEIG1Q5JSS6 88 aa3□□□□□ -1.93
SPG11-208ENST00000558155 C9orf129Q5T035 196 aaKnown RBP3□□□□□ -1.93
SPG11-208ENST00000558155 MRPL55Q7Z7F7 128 aaKnown RBP3□□□□□ -1.93
SPG11-208ENST00000558155 TMEM191AQ9H0A3 160 aa3□□□□□ -1.93
SPG11-208ENST00000558155 LAMTOR3Q9UHA4 124 aa3□□□□□ -1.93
SPG11-208ENST00000558155 TRBV20OR9-2A0A075B6H5 130 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 IGKV2D-26A0A0A0MRZ7 120 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 ZNF727A8MUV8 499 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 F8W1H4 67 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 K7EP34 96 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 BCE1O60756 84 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 DPM2O94777 84 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 SEC11AP67812 179 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 KIAA0087Q14695 138 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 FAM229BQ4G0N7 80 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 LYRM7Q5U5X0 104 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 Q6Q795 121 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 Q6ZUT4 128 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 FAM19A1Q7Z5A9 133 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 PLEKHB2Q96CS7 222 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 ANAPC11Q9NYG5 84 aa2.99□□□□□ -1.93
SPG11-208ENST00000558155 A0A1B0GUT8 65 aa2.98□□□□□ -1.93
SPG11-208ENST00000558155 TRGC2P03986 189 aa2.98□□□□□ -1.93
SPG11-208ENST00000558155 HINT1P49773 126 aaPredicted RBP2.98□□□□□ -1.93
SPG11-208ENST00000558155 SEC61BP60468 96 aaKnown RBP2.98□□□□□ -1.93
SPG11-208ENST00000558155 SUMO2P61956 95 aaKnown RBP2.98□□□□□ -1.93
SPG11-208ENST00000558155 HBBP68871 147 aa2.98□□□□□ -1.93
SPG11-208ENST00000558155 PMCHL1Q16048 86 aa2.98□□□□□ -1.93
SPG11-208ENST00000558155 ASB16-AS1Q495Z4 193 aa2.98□□□□□ -1.93
SPG11-208ENST00000558155 KRTAP13-2Q52LG2 175 aa2.98□□□□□ -1.93
SPG11-208ENST00000558155 LINC00242Q5T6M2 205 aa2.98□□□□□ -1.93
SPG11-208ENST00000558155 RAB37Q96AX2 223 aa2.98□□□□□ -1.93
SPG11-208ENST00000558155 YPEL4Q96NS1 127 aa2.98□□□□□ -1.93
SPG11-208ENST00000558155 TP73-AS1Q9UF72 201 aa2.98□□□□□ -1.93
SPG11-208ENST00000558155 PAM16Q9Y3D7 125 aa2.98□□□□□ -1.93
SPG11-208ENST00000558155 TRBV24-1A0A075B6N3 115 aa2.97□□□□□ -1.93
SPG11-208ENST00000558155 TMEM250H0YL14 139 aa2.97□□□□□ -1.93
SPG11-208ENST00000558155 TAX1BP3O14907 124 aa2.97□□□□□ -1.93
SPG11-208ENST00000558155 PRSS2P07478 247 aa2.97□□□□□ -1.93
SPG11-208ENST00000558155 IGLC3P0DOY3 106 aa2.97□□□□□ -1.93
SPG11-208ENST00000558155 FABP2P12104 132 aa2.97□□□□□ -1.93
SPG11-208ENST00000558155 NDUFV3P56181 108 aaKnown RBP2.97□□□□□ -1.93
SPG11-208ENST00000558155 MRPS36P82909 103 aaKnown RBP2.97□□□□□ -1.93
SPG11-208ENST00000558155 RIGQ13278 110 aa2.97□□□□□ -1.93
SPG11-208ENST00000558155 SPATA45Q537H7 98 aa2.97□□□□□ -1.93
SPG11-208ENST00000558155 SPAG11AQ6PDA7 123 aa2.97□□□□□ -1.93
SPG11-208ENST00000558155 C2orf82Q6UX34 121 aa2.97□□□□□ -1.93
SPG11-208ENST00000558155 FP248Q71RG6 208 aaPredicted RBP2.97□□□□□ -1.93
SPG11-208ENST00000558155 AMN1Q8IY45 258 aa2.97□□□□□ -1.93
SPG11-208ENST00000558155 LINC01561Q8N1V8 128 aa2.97□□□□□ -1.93
SPG11-208ENST00000558155 PMCHL2Q9BQD1 86 aa2.97□□□□□ -1.93
SPG11-208ENST00000558155 FSIP2Q5CZC0 6907 aa2.97□□□□□ -1.93
SPG11-208ENST00000558155 SMKR1H3BMG3 65 aa2.96□□□□□ -1.94
SPG11-208ENST00000558155 H3BRM9 83 aa2.96□□□□□ -1.94
SPG11-208ENST00000558155 UBE2AP49459 152 aa2.96□□□□□ -1.94
SPG11-208ENST00000558155 RPL39P62891 51 aaKnown RBP2.96□□□□□ -1.94
SPG11-208ENST00000558155 PNRC1Q12796 327 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms