RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 SND1-IT1Q9HBX3 110 aa5.56□□□□□ -1.52
SPG11-207ENST00000558138 RPL37AP8A6NKH3 93 aa5.55□□□□□ -1.52
SPG11-207ENST00000558138 KRTAP29-1A8MX34 341 aaPredicted RBP5.55□□□□□ -1.52
SPG11-207ENST00000558138 J3QQQ9 107 aa5.55□□□□□ -1.52
SPG11-207ENST00000558138 OXTP01178 125 aa5.55□□□□□ -1.52
SPG11-207ENST00000558138 PET117Q6UWS5 81 aa5.55□□□□□ -1.52
SPG11-207ENST00000558138 IGLV7-43P04211 117 aa5.54□□□□□ -1.52
SPG11-207ENST00000558138 C3orf79P0CE67 100 aa5.54□□□□□ -1.52
SPG11-207ENST00000558138 NMUP48645 174 aa5.54□□□□□ -1.52
SPG11-207ENST00000558138 KRTAP7-1Q8IUC3 87 aa5.54□□□□□ -1.52
SPG11-207ENST00000558138 MIEN1Q9BRT3 115 aa5.54□□□□□ -1.52
SPG11-207ENST00000558138 TP73-AS1Q9UF72 201 aa5.54□□□□□ -1.52
SPG11-207ENST00000558138 PLA2G2DQ9UNK4 145 aa5.54□□□□□ -1.52
SPG11-207ENST00000558138 IGKV2-28A0A075B6P5 120 aa5.53□□□□□ -1.52
SPG11-207ENST00000558138 IGKV2D-28P01615 120 aa5.53□□□□□ -1.52
SPG11-207ENST00000558138 TSPEAR-AS2P59090 65 aa5.53□□□□□ -1.52
SPG11-207ENST00000558138 COA6Q5JTJ3 125 aaKnown RBP5.53□□□□□ -1.52
SPG11-207ENST00000558138 LINC01545Q5VT33 79 aa5.53□□□□□ -1.52
SPG11-207ENST00000558138 MIR7-3HGQ8N6C7 128 aa5.53□□□□□ -1.52
SPG11-207ENST00000558138 DIRC1Q969H9 104 aa5.53□□□□□ -1.52
SPG11-207ENST00000558138 LINC00167Q96N53 147 aa5.53□□□□□ -1.52
SPG11-207ENST00000558138 E9PLD3 99 aa5.52□□□□□ -1.53
SPG11-207ENST00000558138 UBE2AP49459 152 aa5.52□□□□□ -1.53
SPG11-207ENST00000558138 KRTAP11-1Q8IUC1 163 aa5.52□□□□□ -1.53
SPG11-207ENST00000558138 BOD1L2Q8IYS8 172 aa5.52□□□□□ -1.53
SPG11-207ENST00000558138 IGLV5-37A0A075B6J1 123 aa5.51□□□□□ -1.53
SPG11-207ENST00000558138 NCR3O14931 201 aa5.51□□□□□ -1.53
SPG11-207ENST00000558138 S100A12P80511 92 aa5.51□□□□□ -1.53
SPG11-207ENST00000558138 DAND5Q8N907 189 aa5.51□□□□□ -1.53
SPG11-207ENST00000558138 BCE1O60756 84 aa5.5□□□□□ -1.53
SPG11-207ENST00000558138 VPREB1P12018 145 aa5.5□□□□□ -1.53
SPG11-207ENST00000558138 RPL28P46779 137 aaKnown RBP5.5□□□□□ -1.53
SPG11-207ENST00000558138 AKR1D1P51857 326 aa5.5□□□□□ -1.53
SPG11-207ENST00000558138 NPC2P61916 151 aa5.5□□□□□ -1.53
SPG11-207ENST00000558138 ATOH7Q8N100 152 aa5.5□□□□□ -1.53
SPG11-207ENST00000558138 DMBT1Q9UGM3 2413 aaPredicted RBP5.49□□□□□ -1.53
SPG11-207ENST00000558138 ZNF815PA8K554 130 aa5.49□□□□□ -1.53
SPG11-207ENST00000558138 H0Y9J4 135 aa5.49□□□□□ -1.53
SPG11-207ENST00000558138 SRSF9Q13242 221 aaKnown RBP eCLIP5.49□□□□□ -1.53
SPG11-207ENST00000558138 FAM19A1Q7Z5A9 133 aa5.49□□□□□ -1.53
SPG11-207ENST00000558138 HIST3H2BBQ8N257 126 aa5.49□□□□□ -1.53
SPG11-207ENST00000558138 MYCBP2O75592 4640 aa5.48□□□□□ -1.53
SPG11-207ENST00000558138 A0A0J9YXY3 114 aa5.48□□□□□ -1.53
SPG11-207ENST00000558138 HSBP1L1C9JCN9 74 aa5.48□□□□□ -1.53
SPG11-207ENST00000558138 M0R378 163 aa5.48□□□□□ -1.53
SPG11-207ENST00000558138 ZNF861PO60384 105 aa5.48□□□□□ -1.53
SPG11-207ENST00000558138 SCGB1D4Q6XE38 83 aa5.48□□□□□ -1.53
SPG11-207ENST00000558138 SNRPEP62304 92 aaKnown RBP5.47□□□□□ -1.53
SPG11-207ENST00000558138 S100A7L2Q5SY68 101 aa5.47□□□□□ -1.53
SPG11-207ENST00000558138 LINC01600Q96MT4 127 aa5.47□□□□□ -1.53
SPG11-207ENST00000558138 HIST1H2BLQ99880 126 aa5.47□□□□□ -1.53
SPG11-207ENST00000558138 PKHD1L1Q86WI1 4243 aa5.47□□□□□ -1.53
SPG11-207ENST00000558138 IGLV1-50A0A075B6I6 118 aa5.46□□□□□ -1.54
SPG11-207ENST00000558138 TMEM238C9JI98 176 aa5.46□□□□□ -1.54
SPG11-207ENST00000558138 PRLHP81277 87 aa5.46□□□□□ -1.54
SPG11-207ENST00000558138 Q8NDZ9 215 aa5.46□□□□□ -1.54
SPG11-207ENST00000558138 TMEM126AQ9H061 195 aa5.46□□□□□ -1.54
SPG11-207ENST00000558138 IGKV2D-26A0A0A0MRZ7 120 aa5.45□□□□□ -1.54
SPG11-207ENST00000558138 SCGB1D1O95968 90 aa5.45□□□□□ -1.54
SPG11-207ENST00000558138 TTTY13Q9BZ97 58 aa5.45□□□□□ -1.54
SPG11-207ENST00000558138 SPANXB1Q9NS25 103 aaPredicted RBP5.45□□□□□ -1.54
SPG11-207ENST00000558138 ETDCA0A1B0GVM5 59 aa5.44□□□□□ -1.54
SPG11-207ENST00000558138 PRYO14603 147 aa5.44□□□□□ -1.54
SPG11-207ENST00000558138 DDTP30046 118 aa5.44□□□□□ -1.54
SPG11-207ENST00000558138 ANKRD39Q53RE8 183 aa5.44□□□□□ -1.54
SPG11-207ENST00000558138 TRBV10-3A0A0K0K1G6 114 aa5.43□□□□□ -1.54
SPG11-207ENST00000558138 TIMM17BO60830 172 aa5.43□□□□□ -1.54
SPG11-207ENST00000558138 ADAMTSL4-AS1Q5T5F5 129 aa5.43□□□□□ -1.54
SPG11-207ENST00000558138 PRR26Q8N8Z3 221 aa5.43□□□□□ -1.54
SPG11-207ENST00000558138 OR13C6PQ8NH95 151 aa5.43□□□□□ -1.54
SPG11-207ENST00000558138 COPS9Q8WXC6 57 aa5.43□□□□□ -1.54
SPG11-207ENST00000558138 HIGD2AQ9BW72 106 aa5.43□□□□□ -1.54
SPG11-207ENST00000558138 MT1HL1P0DM35 61 aa5.42□□□□□ -1.54
SPG11-207ENST00000558138 TRBV10-2A0A0K0K1G8 114 aa5.41□□□□□ -1.54
SPG11-207ENST00000558138 NDUFC2O95298 119 aa5.41□□□□□ -1.54
SPG11-207ENST00000558138 RPL13AP40429 203 aaKnown RBP5.41□□□□□ -1.54
SPG11-207ENST00000558138 PCP2Q8IVA1 136 aa5.41□□□□□ -1.54
SPG11-207ENST00000558138 LINC00308Q8TCZ7 52 aa5.41□□□□□ -1.54
SPG11-207ENST00000558138 SPANXCQ9NY87 97 aa5.41□□□□□ -1.54
SPG11-207ENST00000558138 CBY1Q9Y3M2 126 aa5.41□□□□□ -1.54
SPG11-207ENST00000558138 TRAV23DV6A0A075B6W5 121 aa5.4□□□□□ -1.54
SPG11-207ENST00000558138 LOC107984156A0A0G2JMH3 177 aa5.4□□□□□ -1.54
SPG11-207ENST00000558138 C5orf52A6NGY3 159 aa5.4□□□□□ -1.54
SPG11-207ENST00000558138 HINT1P49773 126 aaPredicted RBP5.4□□□□□ -1.54
SPG11-207ENST00000558138 SOSTDC1Q6X4U4 206 aa5.4□□□□□ -1.54
SPG11-207ENST00000558138 ARL17AQ8IVW1 177 aa5.4□□□□□ -1.54
SPG11-207ENST00000558138 TMA7Q9Y2S6 64 aaKnown RBP5.4□□□□□ -1.54
SPG11-207ENST00000558138 LRP1Q07954 4544 aaKnown RBP5.4□□□□□ -1.55
SPG11-207ENST00000558138 FAT3Q8TDW7 4589 aa5.39□□□□□ -1.55
SPG11-207ENST00000558138 CRYGAP11844 174 aa5.39□□□□□ -1.55
SPG11-207ENST00000558138 LITAFQ99732 161 aa5.39□□□□□ -1.55
SPG11-207ENST00000558138 SPANXDQ9BXN6 97 aa5.39□□□□□ -1.55
SPG11-207ENST00000558138 KCNQ1DNQ9H478 68 aa5.39□□□□□ -1.55
SPG11-207ENST00000558138 ZNF706Q9Y5V0 76 aaPredicted RBP5.39□□□□□ -1.55
SPG11-207ENST00000558138 KRTAP1-4P0C5Y4 121 aa5.38□□□□□ -1.55
SPG11-207ENST00000558138 KRTAP10-8P60410 259 aa5.38□□□□□ -1.55
SPG11-207ENST00000558138 KRTAP13-1Q8IUC0 172 aa5.38□□□□□ -1.55
SPG11-207ENST00000558138 LINC00518Q8N0U6 118 aa5.38□□□□□ -1.55
SPG11-207ENST00000558138 LINC00337Q8N6G1 96 aa5.38□□□□□ -1.55
SPG11-207ENST00000558138 TYMSOSQ8TAI1 123 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms