RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 SYS1-DBNDD2H3BUS1 97 aa5.28□□□□□ -1.56
IGKV2D-28-202ENST00000558026 RPL28P46779 137 aaKnown RBP5.28□□□□□ -1.56
IGKV2D-28-202ENST00000558026 RPL39P62891 51 aaKnown RBP5.28□□□□□ -1.56
IGKV2D-28-202ENST00000558026 PET117Q6UWS5 81 aa5.28□□□□□ -1.56
IGKV2D-28-202ENST00000558026 COX6B2Q6YFQ2 88 aa5.28□□□□□ -1.56
IGKV2D-28-202ENST00000558026 TMEM141Q96I45 108 aa5.28□□□□□ -1.56
IGKV2D-28-202ENST00000558026 AMELXQ99217 191 aa5.28□□□□□ -1.56
IGKV2D-28-202ENST00000558026 UBE2D4Q9Y2X8 147 aa5.28□□□□□ -1.56
IGKV2D-28-202ENST00000558026 CFC1P0CG37 223 aa5.27□□□□□ -1.57
IGKV2D-28-202ENST00000558026 FAM229BQ4G0N7 80 aa5.27□□□□□ -1.57
IGKV2D-28-202ENST00000558026 C10orf25Q5T742 122 aa5.27□□□□□ -1.57
IGKV2D-28-202ENST00000558026 C3orf22Q8N5N4 141 aa5.27□□□□□ -1.57
IGKV2D-28-202ENST00000558026 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
IGKV2D-28-202ENST00000558026 ZNF25P17030 456 aaPredicted RBP5.26□□□□□ -1.57
IGKV2D-28-202ENST00000558026 SPAG11BQ08648 103 aa5.26□□□□□ -1.57
IGKV2D-28-202ENST00000558026 TEX43Q6ZNM6 134 aa5.26□□□□□ -1.57
IGKV2D-28-202ENST00000558026 FAM19A3Q7Z5A8 133 aa5.26□□□□□ -1.57
IGKV2D-28-202ENST00000558026 SCGB3A1Q96QR1 104 aa5.26□□□□□ -1.57
IGKV2D-28-202ENST00000558026 MAP1LC3CQ9BXW4 147 aa5.26□□□□□ -1.57
IGKV2D-28-202ENST00000558026 COX7A2LO14548 114 aa5.25□□□□□ -1.57
IGKV2D-28-202ENST00000558026 Q6ZUT4 128 aa5.25□□□□□ -1.57
IGKV2D-28-202ENST00000558026 DAND5Q8N907 189 aa5.25□□□□□ -1.57
IGKV2D-28-202ENST00000558026 MRPL35Q9NZE8 188 aaKnown RBP5.25□□□□□ -1.57
IGKV2D-28-202ENST00000558026 F8VRH5 84 aa5.24□□□□□ -1.57
IGKV2D-28-202ENST00000558026 TLX1NBP0CAT3 122 aa5.24□□□□□ -1.57
IGKV2D-28-202ENST00000558026 KRTDAPP60985 99 aa5.24□□□□□ -1.57
IGKV2D-28-202ENST00000558026 SMAGPQ0VAQ4 97 aa5.24□□□□□ -1.57
IGKV2D-28-202ENST00000558026 PAPPA-AS1Q5QFB9 102 aa5.24□□□□□ -1.57
IGKV2D-28-202ENST00000558026 C9orf129Q5T035 196 aaKnown RBP5.24□□□□□ -1.57
IGKV2D-28-202ENST00000558026 C5orf38Q86SI9 138 aa5.24□□□□□ -1.57
IGKV2D-28-202ENST00000558026 LINC00518Q8N0U6 118 aa5.24□□□□□ -1.57
IGKV2D-28-202ENST00000558026 IGLV5-45A0A087WSX0 123 aa5.23□□□□□ -1.57
IGKV2D-28-202ENST00000558026 C20orf202A1L168 122 aa5.23□□□□□ -1.57
IGKV2D-28-202ENST00000558026 BCE1O60756 84 aa5.23□□□□□ -1.57
IGKV2D-28-202ENST00000558026 IGLC3P0DOY3 106 aa5.23□□□□□ -1.57
IGKV2D-28-202ENST00000558026 PMVKQ15126 192 aa5.23□□□□□ -1.57
IGKV2D-28-202ENST00000558026 UNQ6190/PRO20217Q6UXQ8 127 aa5.23□□□□□ -1.57
IGKV2D-28-202ENST00000558026 CST9LQ9H4G1 147 aa5.23□□□□□ -1.57
IGKV2D-28-202ENST00000558026 CDC42SE2Q9NRR3 84 aa5.23□□□□□ -1.57
IGKV2D-28-202ENST00000558026 C6orf48Q9UBA6 75 aa5.23□□□□□ -1.57
IGKV2D-28-202ENST00000558026 Q6ZN92 141 aa5.22□□□□□ -1.57
IGKV2D-28-202ENST00000558026 DPM2O94777 84 aa5.21□□□□□ -1.58
IGKV2D-28-202ENST00000558026 PLNP26678 52 aa5.21□□□□□ -1.58
IGKV2D-28-202ENST00000558026 SPAG11AQ6PDA7 123 aa5.21□□□□□ -1.58
IGKV2D-28-202ENST00000558026 TMEM101Q96IK0 257 aa5.21□□□□□ -1.58
IGKV2D-28-202ENST00000558026 C22orf24Q9Y442 160 aa5.21□□□□□ -1.58
IGKV2D-28-202ENST00000558026 C11orf86A6NJI1 115 aa5.2□□□□□ -1.58
IGKV2D-28-202ENST00000558026 ZC2HC1BQ5TFG8 222 aa5.2□□□□□ -1.58
IGKV2D-28-202ENST00000558026 C12orf57Q99622 126 aa5.2□□□□□ -1.58
IGKV2D-28-202ENST00000558026 CHTOPQ9Y3Y2 248 aaKnown RBP5.2□□□□□ -1.58
IGKV2D-28-202ENST00000558026 TINCRA0A1B0GVN0 87 aa5.19□□□□□ -1.58
IGKV2D-28-202ENST00000558026 NDUFA1O15239 70 aa5.19□□□□□ -1.58
IGKV2D-28-202ENST00000558026 SCGB1D1O95968 90 aa5.19□□□□□ -1.58
IGKV2D-28-202ENST00000558026 IGKCP01834 107 aa5.19□□□□□ -1.58
IGKV2D-28-202ENST00000558026 ZNF22P17026 224 aaPredicted RBP5.19□□□□□ -1.58
IGKV2D-28-202ENST00000558026 KRTAP13-1Q8IUC0 172 aa5.19□□□□□ -1.58
IGKV2D-28-202ENST00000558026 ORAOV1Q8WV07 137 aa5.19□□□□□ -1.58
IGKV2D-28-202ENST00000558026 VCX2Q9H322 139 aa5.19□□□□□ -1.58
IGKV2D-28-202ENST00000558026 SEC11AP67812 179 aa5.18□□□□□ -1.58
IGKV2D-28-202ENST00000558026 RNASE13Q5GAN3 156 aaKnown RBP5.18□□□□□ -1.58
IGKV2D-28-202ENST00000558026 PMCHL2Q9BQD1 86 aa5.18□□□□□ -1.58
IGKV2D-28-202ENST00000558026 C2orf88Q9BSF0 95 aa5.18□□□□□ -1.58
IGKV2D-28-202ENST00000558026 IGHV3OR16-9A0A0B4J2B5 98 aa5.17□□□□□ -1.58
IGKV2D-28-202ENST00000558026 KRTAP19-6Q3LI70 58 aa5.17□□□□□ -1.58
IGKV2D-28-202ENST00000558026 ANKRD39Q53RE8 183 aa5.17□□□□□ -1.58
IGKV2D-28-202ENST00000558026 C4orf48Q5BLP8 95 aa5.17□□□□□ -1.58
IGKV2D-28-202ENST00000558026 ATOH7Q8N100 152 aa5.17□□□□□ -1.58
IGKV2D-28-202ENST00000558026 LINC01561Q8N1V8 128 aa5.17□□□□□ -1.58
IGKV2D-28-202ENST00000558026 VAMP8Q9BV40 100 aa5.17□□□□□ -1.58
IGKV2D-28-202ENST00000558026 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
IGKV2D-28-202ENST00000558026 TRAV13-1A0A0B4J241 112 aa5.16□□□□□ -1.58
IGKV2D-28-202ENST00000558026 IGLV5-39A0A0G2JS06 123 aa5.16□□□□□ -1.58
IGKV2D-28-202ENST00000558026 TMEM223A0PJW6 202 aa5.16□□□□□ -1.58
IGKV2D-28-202ENST00000558026 RPL37AP8A6NKH3 93 aa5.16□□□□□ -1.58
IGKV2D-28-202ENST00000558026 E9PLD3 99 aa5.16□□□□□ -1.58
IGKV2D-28-202ENST00000558026 H0Y8G0 127 aa5.16□□□□□ -1.58
IGKV2D-28-202ENST00000558026 UBE2AP49459 152 aa5.16□□□□□ -1.58
IGKV2D-28-202ENST00000558026 HERVK_113P63121 156 aa5.16□□□□□ -1.58
IGKV2D-28-202ENST00000558026 NDUFC2-KCTD14E9PQ53 114 aa5.15□□□□□ -1.59
IGKV2D-28-202ENST00000558026 DLEU1O43261 78 aa5.15□□□□□ -1.59
IGKV2D-28-202ENST00000558026 S100A12P80511 92 aa5.15□□□□□ -1.59
IGKV2D-28-202ENST00000558026 SPATA45Q537H7 98 aa5.15□□□□□ -1.59
IGKV2D-28-202ENST00000558026 LBHQ53QV2 105 aaPredicted RBP5.15□□□□□ -1.59
IGKV2D-28-202ENST00000558026 LINC00469Q8N7U9 141 aa5.15□□□□□ -1.59
IGKV2D-28-202ENST00000558026 LINC00846Q9NV44 126 aa5.15□□□□□ -1.59
IGKV2D-28-202ENST00000558026 PAM16Q9Y3D7 125 aa5.15□□□□□ -1.59
IGKV2D-28-202ENST00000558026 SMIM1B2RUZ4 78 aa5.14□□□□□ -1.59
IGKV2D-28-202ENST00000558026 F8WDY8 70 aa5.14□□□□□ -1.59
IGKV2D-28-202ENST00000558026 MRPL55Q7Z7F7 128 aaKnown RBP5.14□□□□□ -1.59
IGKV2D-28-202ENST00000558026 Q8NBF4 154 aa5.14□□□□□ -1.59
IGKV2D-28-202ENST00000558026 CDKN2A-AS1Q9UH64 79 aa5.14□□□□□ -1.59
IGKV2D-28-202ENST00000558026 NDUFA12Q9UI09 145 aa5.14□□□□□ -1.59
IGKV2D-28-202ENST00000558026 COX8AP10176 69 aa5.13□□□□□ -1.59
IGKV2D-28-202ENST00000558026 TSPEAR-AS2P59090 65 aa5.13□□□□□ -1.59
IGKV2D-28-202ENST00000558026 C2orf82Q6UX34 121 aa5.13□□□□□ -1.59
IGKV2D-28-202ENST00000558026 BOD1L2Q8IYS8 172 aa5.13□□□□□ -1.59
IGKV2D-28-202ENST00000558026 XAGE1AQ9HD64 81 aa5.13□□□□□ -1.59
IGKV2D-28-202ENST00000558026 HSBP1L1C9JCN9 74 aa5.12□□□□□ -1.59
IGKV2D-28-202ENST00000558026 LEPROTO15243 131 aa5.12□□□□□ -1.59
IGKV2D-28-202ENST00000558026 MT2AP02795 61 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms