RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 KIAA0087Q14695 138 aa9.07□□□□□ -0.96
CPNE6-204ENST00000557829 UPK3BQ9BT76 320 aa9.07□□□□□ -0.96
CPNE6-204ENST00000557829 LINC00846Q9NV44 126 aa9.07□□□□□ -0.96
CPNE6-204ENST00000557829 X6R8D5 127 aa9.07□□□□□ -0.96
CPNE6-204ENST00000557829 NANOS2P60321 138 aaKnown RBP9.06□□□□□ -0.96
CPNE6-204ENST00000557829 FAM19A5Q7Z5A7 132 aaPredicted RBP9.06□□□□□ -0.96
CPNE6-204ENST00000557829 MUC7Q8TAX7 377 aa9.06□□□□□ -0.96
CPNE6-204ENST00000557829 TRBV10-3A0A0K0K1G6 114 aa9.06□□□□□ -0.96
CPNE6-204ENST00000557829 LYRM9A8MSI8 78 aa9.06□□□□□ -0.96
CPNE6-204ENST00000557829 TMEM256-PLSCR3K7ERE1 68 aa9.06□□□□□ -0.96
CPNE6-204ENST00000557829 NCR3O14931 201 aa9.06□□□□□ -0.96
CPNE6-204ENST00000557829 Q8N814 137 aa9.06□□□□□ -0.96
CPNE6-204ENST00000557829 MEGF8Q7Z7M0 2845 aa9.06□□□□□ -0.96
CPNE6-204ENST00000557829 BCE1O60756 84 aa9.05□□□□□ -0.96
CPNE6-204ENST00000557829 C11orf68Q9H3H3 251 aaKnown RBP9.05□□□□□ -0.96
CPNE6-204ENST00000557829 SLPIP03973 132 aa9.04□□□□□ -0.96
CPNE6-204ENST00000557829 KRTAP10-11P60412 298 aa9.04□□□□□ -0.96
CPNE6-204ENST00000557829 hADV29S1A0JD25 119 aa9.03□□□□□ -0.96
CPNE6-204ENST00000557829 USP17L23D6RBM5 183 aa9.02□□□□□ -0.97
CPNE6-204ENST00000557829 CHCHD10Q8WYQ3 142 aaPredicted RBP9.02□□□□□ -0.97
CPNE6-204ENST00000557829 DPH3Q96FX2 82 aa9.02□□□□□ -0.97
CPNE6-204ENST00000557829 LYPD5Q6UWN5 251 aa9.02□□□□□ -0.97
CPNE6-204ENST00000557829 IGKV3D-7A0A0C4DH55 119 aa9.01□□□□□ -0.97
CPNE6-204ENST00000557829 LINC00269Q8N2A0 174 aa9.01□□□□□ -0.97
CPNE6-204ENST00000557829 LOC107984640A0A0U1RRK4 108 aa9□□□□□ -0.97
CPNE6-204ENST00000557829 NBEAL2Q6ZNJ1 2754 aa9□□□□□ -0.97
CPNE6-204ENST00000557829 REG3AQ06141 175 aa9□□□□□ -0.97
CPNE6-204ENST00000557829 EGFEM1PQ0D2K5 195 aa9□□□□□ -0.97
CPNE6-204ENST00000557829 CLPSL2Q6UWE3 100 aa9□□□□□ -0.97
CPNE6-204ENST00000557829 IGHV4-30-4P0DP06 118 aa8.98□□□□□ -0.97
CPNE6-204ENST00000557829 PRR3P79522 188 aaKnown RBP8.98□□□□□ -0.97
CPNE6-204ENST00000557829 H3BQ85 93 aa8.97□□□□□ -0.97
CPNE6-204ENST00000557829 ANGP03950 147 aaKnown RBP8.97□□□□□ -0.97
CPNE6-204ENST00000557829 DEFB135Q30KP9 77 aa8.97□□□□□ -0.97
CPNE6-204ENST00000557829 LINC00575Q6W349 94 aa8.97□□□□□ -0.97
CPNE6-204ENST00000557829 DNAH3Q8TD57 4116 aa8.97□□□□□ -0.97
CPNE6-204ENST00000557829 A0A096LPF7 62 aa8.97□□□□□ -0.97
CPNE6-204ENST00000557829 A0A0J9YWU9 116 aa8.96□□□□□ -0.98
CPNE6-204ENST00000557829 APOC4P55056 127 aa8.96□□□□□ -0.98
CPNE6-204ENST00000557829 C6orf99Q4VX62 202 aa8.96□□□□□ -0.98
CPNE6-204ENST00000557829 PRKDCP78527 4128 aaKnown RBP8.95□□□□□ -0.98
CPNE6-204ENST00000557829 LOC110117498A0A087WWA1 95 aa8.94□□□□□ -0.98
CPNE6-204ENST00000557829 DAD1P61803 113 aa8.94□□□□□ -0.98
CPNE6-204ENST00000557829 GVQW2A0A096LPI5 108 aaPredicted RBP8.93□□□□□ -0.98
CPNE6-204ENST00000557829 ZNF561-AS1K7EIQ3 104 aa8.93□□□□□ -0.98
CPNE6-204ENST00000557829 C9orf116Q5BN46 136 aaPredicted RBP8.93□□□□□ -0.98
CPNE6-204ENST00000557829 LELP1Q5T871 98 aa8.93□□□□□ -0.98
CPNE6-204ENST00000557829 IGLV10-54A0A075B6I4 117 aa8.93□□□□□ -0.98
CPNE6-204ENST00000557829 A0A087WVE0 104 aa8.93□□□□□ -0.98
CPNE6-204ENST00000557829 C6orf223Q8N319 242 aa8.93□□□□□ -0.98
CPNE6-204ENST00000557829 UBL5Q9BZL1 73 aa8.93□□□□□ -0.98
CPNE6-204ENST00000557829 IGLV6-57P01721 117 aa8.92□□□□□ -0.98
CPNE6-204ENST00000557829 PRB2P02812 416 aaPredicted RBP8.92□□□□□ -0.98
CPNE6-204ENST00000557829 SPAG11BQ08648 103 aa8.92□□□□□ -0.98
CPNE6-204ENST00000557829 Q8NDZ9 215 aa8.92□□□□□ -0.98
CPNE6-204ENST00000557829 DEFB4AO15263 64 aa8.92□□□□□ -0.98
CPNE6-204ENST00000557829 MIFP14174 115 aa8.92□□□□□ -0.98
CPNE6-204ENST00000557829 RBM3P98179 157 aaKnown RBP8.92□□□□□ -0.98
CPNE6-204ENST00000557829 CYSTM1Q9H1C7 97 aa8.92□□□□□ -0.98
CPNE6-204ENST00000557829 PRR34Q9NV39 138 aa8.92□□□□□ -0.98
CPNE6-204ENST00000557829 EPM2AB3EWF7 344 aa8.91□□□□□ -0.98
CPNE6-204ENST00000557829 PDE6GP18545 87 aa8.91□□□□□ -0.98
CPNE6-204ENST00000557829 Q6ZQT0 140 aa8.91□□□□□ -0.98
CPNE6-204ENST00000557829 UNQ6190/PRO20217Q6UXQ8 127 aa8.9□□□□□ -0.98
CPNE6-204ENST00000557829 GHRHP01286 108 aa8.9□□□□□ -0.98
CPNE6-204ENST00000557829 Q8N3U1 123 aa8.9□□□□□ -0.98
CPNE6-204ENST00000557829 C10orf25Q5T742 122 aa8.89□□□□□ -0.99
CPNE6-204ENST00000557829 TGP01266 2768 aa8.89□□□□□ -0.99
CPNE6-204ENST00000557829 Q8NAQ8 132 aa8.89□□□□□ -0.99
CPNE6-204ENST00000557829 MRAPQ8TCY5 172 aa8.89□□□□□ -0.99
CPNE6-204ENST00000557829 SPART-AS1P0CW21 52 aa8.88□□□□□ -0.99
CPNE6-204ENST00000557829 TRAV7A0A075B6U4 112 aa8.88□□□□□ -0.99
CPNE6-204ENST00000557829 Q5XG85 94 aa8.87□□□□□ -0.99
CPNE6-204ENST00000557829 RETNQ9HD89 108 aa8.87□□□□□ -0.99
CPNE6-204ENST00000557829 TRBV7-6A0A0J9YX20 115 aa8.86□□□□□ -0.99
CPNE6-204ENST00000557829 KPRPQ5T749 579 aaPredicted RBP8.86□□□□□ -0.99
CPNE6-204ENST00000557829 ENHOQ6UWT2 76 aa8.86□□□□□ -0.99
CPNE6-204ENST00000557829 DSCR8Q96T75 97 aa8.86□□□□□ -0.99
CPNE6-204ENST00000557829 SERP1Q9Y6X1 66 aa8.86□□□□□ -0.99
CPNE6-204ENST00000557829 FAM236DA0A1B0GTK5 79 aa8.86□□□□□ -0.99
CPNE6-204ENST00000557829 K7EIL1 84 aa8.86□□□□□ -0.99
CPNE6-204ENST00000557829 FAM236CP0DP71 79 aa8.86□□□□□ -0.99
CPNE6-204ENST00000557829 KLKP1Q107X0 134 aa8.86□□□□□ -0.99
CPNE6-204ENST00000557829 LAMTOR3Q9UHA4 124 aa8.86□□□□□ -0.99
CPNE6-204ENST00000557829 CELA1Q9UNI1 258 aa8.86□□□□□ -0.99
CPNE6-204ENST00000557829 OXTP01178 125 aa8.85□□□□□ -0.99
CPNE6-204ENST00000557829 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.85□□□□□ -0.99
CPNE6-204ENST00000557829 FAM19A1Q7Z5A9 133 aa8.85□□□□□ -0.99
CPNE6-204ENST00000557829 ATP5EP56381 51 aaPredicted RBP8.84□□□□□ -0.99
CPNE6-204ENST00000557829 DIRC1Q969H9 104 aa8.84□□□□□ -0.99
CPNE6-204ENST00000557829 KLK12Q9UKR0 248 aa8.84□□□□□ -0.99
CPNE6-204ENST00000557829 TRAV23DV6A0A075B6W5 121 aa8.83□□□□□ -1
CPNE6-204ENST00000557829 NDUFC1O43677 76 aa8.83□□□□□ -1
CPNE6-204ENST00000557829 CXCL6P80162 114 aa8.83□□□□□ -1
CPNE6-204ENST00000557829 C6orf48Q9UBA6 75 aa8.83□□□□□ -1
CPNE6-204ENST00000557829 Q6ZQY7 126 aa8.82□□□□□ -1
CPNE6-204ENST00000557829 COL7A1Q02388 2944 aa8.82□□□□□ -1
CPNE6-204ENST00000557829 COX7BP24311 80 aa8.8□□□□□ -1
CPNE6-204ENST00000557829 LINC01547P58512 204 aaPredicted RBP8.8□□□□□ -1
CPNE6-204ENST00000557829 Q6ZVQ6 151 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms