RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PDE6GP18545 87 aa8.02□□□□□ -1.13
VIPAS39-211ENST00000557658 A0A0J9YWU9 116 aa8.01□□□□□ -1.13
VIPAS39-211ENST00000557658 IGHV4-30-4P0DP06 118 aa8.01□□□□□ -1.13
VIPAS39-211ENST00000557658 C20orf197Q8N268 126 aa8.01□□□□□ -1.13
VIPAS39-211ENST00000557658 KRTAP1-1Q07627 177 aa8.01□□□□□ -1.13
VIPAS39-211ENST00000557658 Q6ZQY7 126 aa8.01□□□□□ -1.13
VIPAS39-211ENST00000557658 GCN1Q92616 2671 aaKnown RBP8.01□□□□□ -1.13
VIPAS39-211ENST00000557658 CYSRT1A8MQ03 144 aa8□□□□□ -1.13
VIPAS39-211ENST00000557658 OXTP01178 125 aa8□□□□□ -1.13
VIPAS39-211ENST00000557658 LINC01547P58512 204 aaPredicted RBP8□□□□□ -1.13
VIPAS39-211ENST00000557658 DAD1P61803 113 aa8□□□□□ -1.13
VIPAS39-211ENST00000557658 HAMPP81172 84 aa8□□□□□ -1.13
VIPAS39-211ENST00000557658 Q6ZVQ6 151 aa8□□□□□ -1.13
VIPAS39-211ENST00000557658 LINC00482Q8N8I6 264 aa8□□□□□ -1.13
VIPAS39-211ENST00000557658 USP24Q9UPU5 2620 aa7.99□□□□□ -1.13
VIPAS39-211ENST00000557658 TRAV7A0A075B6U4 112 aa7.99□□□□□ -1.13
VIPAS39-211ENST00000557658 DEFB4AO15263 64 aa7.99□□□□□ -1.13
VIPAS39-211ENST00000557658 M0R2N4 97 aa7.99□□□□□ -1.13
VIPAS39-211ENST00000557658 C9orf66Q5T8R8 295 aa7.99□□□□□ -1.13
VIPAS39-211ENST00000557658 DEFB135Q30KP9 77 aa7.98□□□□□ -1.13
VIPAS39-211ENST00000557658 MTORP42345 2549 aa7.98□□□□□ -1.13
VIPAS39-211ENST00000557658 DIRC1Q969H9 104 aa7.98□□□□□ -1.13
VIPAS39-211ENST00000557658 GVQW2A0A096LPI5 108 aaPredicted RBP7.97□□□□□ -1.13
VIPAS39-211ENST00000557658 LELP1Q5T871 98 aa7.97□□□□□ -1.13
VIPAS39-211ENST00000557658 CXCL6P80162 114 aa7.97□□□□□ -1.13
VIPAS39-211ENST00000557658 NBEAL2Q6ZNJ1 2754 aa7.96□□□□□ -1.13
VIPAS39-211ENST00000557658 FAM236DA0A1B0GTK5 79 aa7.96□□□□□ -1.13
VIPAS39-211ENST00000557658 FAM236CP0DP71 79 aa7.96□□□□□ -1.13
VIPAS39-211ENST00000557658 ACANP16112 2415 aa7.96□□□□□ -1.14
VIPAS39-211ENST00000557658 KRTAP10-3P60369 221 aa7.96□□□□□ -1.14
VIPAS39-211ENST00000557658 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.96□□□□□ -1.14
VIPAS39-211ENST00000557658 KLK12Q9UKR0 248 aa7.96□□□□□ -1.14
VIPAS39-211ENST00000557658 ANK3Q12955 4377 aaKnown RBP7.95□□□□□ -1.14
VIPAS39-211ENST00000557658 PRR34Q9NV39 138 aa7.95□□□□□ -1.14
VIPAS39-211ENST00000557658 APOC4P55056 127 aa7.95□□□□□ -1.14
VIPAS39-211ENST00000557658 COX7BP24311 80 aa7.94□□□□□ -1.14
VIPAS39-211ENST00000557658 SPATA3Q8NHX4 192 aa7.94□□□□□ -1.14
VIPAS39-211ENST00000557658 TRAV10A0A0B4J240 114 aa7.94□□□□□ -1.14
VIPAS39-211ENST00000557658 ZNF73O43830 326 aaPredicted RBP7.94□□□□□ -1.14
VIPAS39-211ENST00000557658 C6orf48Q9UBA6 75 aa7.94□□□□□ -1.14
VIPAS39-211ENST00000557658 CELA1Q9UNI1 258 aa7.94□□□□□ -1.14
VIPAS39-211ENST00000557658 HTN3P15516 51 aa7.93□□□□□ -1.14
VIPAS39-211ENST00000557658 XAGE1AQ9HD64 81 aa7.93□□□□□ -1.14
VIPAS39-211ENST00000557658 TRBV7-4A0A0J9YYF1 115 aa7.93□□□□□ -1.14
VIPAS39-211ENST00000557658 H7BZZ5 65 aa7.93□□□□□ -1.14
VIPAS39-211ENST00000557658 Q5XG85 94 aa7.93□□□□□ -1.14
VIPAS39-211ENST00000557658 MIFP14174 115 aa7.92□□□□□ -1.14
VIPAS39-211ENST00000557658 KLKP1Q107X0 134 aa7.92□□□□□ -1.14
VIPAS39-211ENST00000557658 TRBV7-6A0A0J9YX20 115 aa7.92□□□□□ -1.14
VIPAS39-211ENST00000557658 SPART-AS1P0CW21 52 aa7.92□□□□□ -1.14
VIPAS39-211ENST00000557658 ELOF1P60002 83 aaKnown RBP7.92□□□□□ -1.14
VIPAS39-211ENST00000557658 C4orf26Q17RF5 130 aa7.92□□□□□ -1.14
VIPAS39-211ENST00000557658 Q8NAQ8 132 aa7.91□□□□□ -1.14
VIPAS39-211ENST00000557658 SERP1Q9Y6X1 66 aa7.91□□□□□ -1.14
VIPAS39-211ENST00000557658 SNURFQ9Y675 71 aa7.89□□□□□ -1.15
VIPAS39-211ENST00000557658 VPREB1P12018 145 aa7.88□□□□□ -1.15
VIPAS39-211ENST00000557658 HRCT1Q6UXD1 115 aa7.88□□□□□ -1.15
VIPAS39-211ENST00000557658 SCXQ7RTU7 201 aa7.88□□□□□ -1.15
VIPAS39-211ENST00000557658 CAMK2N2Q96S95 79 aa7.88□□□□□ -1.15
VIPAS39-211ENST00000557658 EPM2AB3EWF7 344 aa7.88□□□□□ -1.15
VIPAS39-211ENST00000557658 WIPF1O43516 503 aa7.88□□□□□ -1.15
VIPAS39-211ENST00000557658 M0R378 163 aa7.87□□□□□ -1.15
VIPAS39-211ENST00000557658 RMI2Q96E14 147 aa7.87□□□□□ -1.15
VIPAS39-211ENST00000557658 EGFEM1PQ0D2K5 195 aa7.86□□□□□ -1.15
VIPAS39-211ENST00000557658 HIGD2BQ4VC39 106 aa7.86□□□□□ -1.15
VIPAS39-211ENST00000557658 HIVEP2P31629 2446 aa7.86□□□□□ -1.15
VIPAS39-211ENST00000557658 NDUFC1O43677 76 aa7.86□□□□□ -1.15
VIPAS39-211ENST00000557658 F8WEM9 126 aa7.85□□□□□ -1.15
VIPAS39-211ENST00000557658 TM2D3Q9BRN9 247 aa7.85□□□□□ -1.15
VIPAS39-211ENST00000557658 PDZD2O15018 2839 aa7.85□□□□□ -1.15
VIPAS39-211ENST00000557658 LINC00528Q8N1L1 170 aa7.85□□□□□ -1.15
VIPAS39-211ENST00000557658 NREPQ16612 68 aa7.83□□□□□ -1.16
VIPAS39-211ENST00000557658 Q6ZRU5 148 aa7.83□□□□□ -1.16
VIPAS39-211ENST00000557658 BPY2O14599 106 aa7.82□□□□□ -1.16
VIPAS39-211ENST00000557658 SMR3AQ99954 134 aa7.82□□□□□ -1.16
VIPAS39-211ENST00000557658 ATP5EP56381 51 aaPredicted RBP7.81□□□□□ -1.16
VIPAS39-211ENST00000557658 WFDC10BQ8IUB3 73 aa7.81□□□□□ -1.16
VIPAS39-211ENST00000557658 KRTAP26-1Q6PEX3 210 aa7.81□□□□□ -1.16
VIPAS39-211ENST00000557658 VWFP04275 2813 aa7.81□□□□□ -1.16
VIPAS39-211ENST00000557658 ERC2-IT1O76042 136 aa7.8□□□□□ -1.16
VIPAS39-211ENST00000557658 SMIM26A0A096LP01 95 aa7.8□□□□□ -1.16
VIPAS39-211ENST00000557658 C15orf56Q8N910 161 aa7.8□□□□□ -1.16
VIPAS39-211ENST00000557658 TMEM254Q8TBM7 123 aa7.79□□□□□ -1.16
VIPAS39-211ENST00000557658 IGKV4-1P06312 121 aa7.79□□□□□ -1.16
VIPAS39-211ENST00000557658 Q8N9L7 120 aa7.78□□□□□ -1.16
VIPAS39-211ENST00000557658 ITPR2Q14571 2701 aa7.78□□□□□ -1.16
VIPAS39-211ENST00000557658 H3BNG1 76 aa7.78□□□□□ -1.16
VIPAS39-211ENST00000557658 KPRPQ5T749 579 aaPredicted RBP7.78□□□□□ -1.16
VIPAS39-211ENST00000557658 Q6ZRP5 223 aa7.77□□□□□ -1.16
VIPAS39-211ENST00000557658 F8WDY8 70 aa7.76□□□□□ -1.17
VIPAS39-211ENST00000557658 C1orf43Q9BWL3 253 aa7.76□□□□□ -1.17
VIPAS39-211ENST00000557658 TENM4Q6N022 2769 aa7.76□□□□□ -1.17
VIPAS39-211ENST00000557658 NKAPP1Q8N9T2 125 aa7.76□□□□□ -1.17
VIPAS39-211ENST00000557658 KCNQ1DNQ9H478 68 aa7.75□□□□□ -1.17
VIPAS39-211ENST00000557658 C3orf84H3BNL1 204 aa7.75□□□□□ -1.17
VIPAS39-211ENST00000557658 SYCNQ0VAF6 134 aa7.74□□□□□ -1.17
VIPAS39-211ENST00000557658 FP248Q71RG6 208 aaPredicted RBP7.74□□□□□ -1.17
VIPAS39-211ENST00000557658 DEFB105AQ8NG35 78 aa7.74□□□□□ -1.17
VIPAS39-211ENST00000557658 OCR1Q9BZK8 76 aa7.74□□□□□ -1.17
VIPAS39-211ENST00000557658 MRAPQ8TCY5 172 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms