RNA–Protein interactions for RNA: ENST00000557478.5

NEDD1-212, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-212ENST00000557478 TRGC2P03986 189 aa10.45□□□□□ -0.74
NEDD1-212ENST00000557478 PLNP26678 52 aa10.45□□□□□ -0.74
NEDD1-212ENST00000557478 MAP1LC3CQ9BXW4 147 aa10.45□□□□□ -0.74
NEDD1-212ENST00000557478 IGKV2-28A0A075B6P5 120 aa10.44□□□□□ -0.74
NEDD1-212ENST00000557478 IGKV2D-28P01615 120 aa10.44□□□□□ -0.74
NEDD1-212ENST00000557478 MYMXA0A1B0GTQ4 84 aa10.43□□□□□ -0.74
NEDD1-212ENST00000557478 FAM229BQ4G0N7 80 aa10.43□□□□□ -0.74
NEDD1-212ENST00000557478 KRTAP13-1Q8IUC0 172 aa10.43□□□□□ -0.74
NEDD1-212ENST00000557478 TMEM126AQ9H061 195 aa10.42□□□□□ -0.74
NEDD1-212ENST00000557478 M0R378 163 aa10.41□□□□□ -0.74
NEDD1-212ENST00000557478 CTAG1AP78358 180 aa10.41□□□□□ -0.74
NEDD1-212ENST00000557478 MEIG1Q5JSS6 88 aa10.41□□□□□ -0.74
NEDD1-212ENST00000557478 FAM19A2Q8N3H0 131 aa10.41□□□□□ -0.74
NEDD1-212ENST00000557478 IGKV2D-26A0A0A0MRZ7 120 aa10.4□□□□□ -0.74
NEDD1-212ENST00000557478 HERVK_113P61574 105 aa10.4□□□□□ -0.74
NEDD1-212ENST00000557478 S100A12P80511 92 aa10.4□□□□□ -0.74
NEDD1-212ENST00000557478 TYMSOSQ8TAI1 123 aa10.4□□□□□ -0.74
NEDD1-212ENST00000557478 NDUFA12Q9UI09 145 aa10.4□□□□□ -0.74
NEDD1-212ENST00000557478 SERF1AO75920 110 aa10.39□□□□□ -0.75
NEDD1-212ENST00000557478 FAM19A1Q7Z5A9 133 aa10.39□□□□□ -0.75
NEDD1-212ENST00000557478 PLEKHB2Q96CS7 222 aa10.39□□□□□ -0.75
NEDD1-212ENST00000557478 RNF213Q63HN8 5207 aa10.38□□□□□ -0.75
NEDD1-212ENST00000557478 NMUP48645 174 aa10.37□□□□□ -0.75
NEDD1-212ENST00000557478 H0Y8G0 127 aa10.36□□□□□ -0.75
NEDD1-212ENST00000557478 LEPROTO15243 131 aa10.36□□□□□ -0.75
NEDD1-212ENST00000557478 DPM2O94777 84 aa10.36□□□□□ -0.75
NEDD1-212ENST00000557478 SMIM13P0DJ93 91 aa10.36□□□□□ -0.75
NEDD1-212ENST00000557478 COLCA2A8K830 154 aa10.35□□□□□ -0.75
NEDD1-212ENST00000557478 SCO1O75880 301 aa10.35□□□□□ -0.75
NEDD1-212ENST00000557478 BOD1L2Q8IYS8 172 aa10.35□□□□□ -0.75
NEDD1-212ENST00000557478 A0A087X002 238 aa10.34□□□□□ -0.75
NEDD1-212ENST00000557478 TMEM238C9JI98 176 aa10.34□□□□□ -0.75
NEDD1-212ENST00000557478 PRYO14603 147 aa10.34□□□□□ -0.75
NEDD1-212ENST00000557478 SLC7A5P1Q8MH63 180 aa10.34□□□□□ -0.75
NEDD1-212ENST00000557478 MIR7-3HGQ8N6C7 128 aa10.34□□□□□ -0.75
NEDD1-212ENST00000557478 ZNF706Q9Y5V0 76 aaPredicted RBP10.34□□□□□ -0.75
NEDD1-212ENST00000557478 A0A0U1RRA0 63 aa10.33□□□□□ -0.76
NEDD1-212ENST00000557478 IGKCP01834 107 aa10.33□□□□□ -0.76
NEDD1-212ENST00000557478 LOC107984156A0A0G2JMH3 177 aa10.32□□□□□ -0.76
NEDD1-212ENST00000557478 J3QQQ9 107 aa10.32□□□□□ -0.76
NEDD1-212ENST00000557478 LINC00310P59036 64 aa10.32□□□□□ -0.76
NEDD1-212ENST00000557478 PRLHP81277 87 aa10.32□□□□□ -0.76
NEDD1-212ENST00000557478 PRR4Q16378 134 aa10.32□□□□□ -0.76
NEDD1-212ENST00000557478 ARL17AQ8IVW1 177 aa10.32□□□□□ -0.76
NEDD1-212ENST00000557478 KCNQ1DNQ9H478 68 aa10.32□□□□□ -0.76
NEDD1-212ENST00000557478 FABP4P15090 132 aa10.31□□□□□ -0.76
NEDD1-212ENST00000557478 LINC00337Q8N6G1 96 aa10.31□□□□□ -0.76
NEDD1-212ENST00000557478 MIEN1Q9BRT3 115 aa10.31□□□□□ -0.76
NEDD1-212ENST00000557478 TRBV10-2A0A0K0K1G8 114 aa10.3□□□□□ -0.76
NEDD1-212ENST00000557478 LGALS3P17931 250 aaKnown RBP10.3□□□□□ -0.76
NEDD1-212ENST00000557478 Q8NDZ9 215 aa10.3□□□□□ -0.76
NEDD1-212ENST00000557478 LINC00304Q8N9R0 145 aa10.28□□□□□ -0.76
NEDD1-212ENST00000557478 HIGD2AQ9BW72 106 aa10.28□□□□□ -0.76
NEDD1-212ENST00000557478 CBY1Q9Y3M2 126 aa10.28□□□□□ -0.76
NEDD1-212ENST00000557478 ETDCA0A1B0GVM5 59 aa10.27□□□□□ -0.77
NEDD1-212ENST00000557478 SPRR1AP35321 89 aa10.27□□□□□ -0.77
NEDD1-212ENST00000557478 NDUFC2O95298 119 aa10.26□□□□□ -0.77
NEDD1-212ENST00000557478 TSPAN13O95857 204 aa10.26□□□□□ -0.77
NEDD1-212ENST00000557478 KRTAP13-2Q52LG2 175 aa10.26□□□□□ -0.77
NEDD1-212ENST00000557478 SPAG11AQ6PDA7 123 aa10.26□□□□□ -0.77
NEDD1-212ENST00000557478 SPANXB1Q9NS25 103 aaPredicted RBP10.26□□□□□ -0.77
NEDD1-212ENST00000557478 NCR3O14931 201 aa10.25□□□□□ -0.77
NEDD1-212ENST00000557478 ANAPC11Q9NYG5 84 aa10.25□□□□□ -0.77
NEDD1-212ENST00000557478 E9PLD3 99 aa10.24□□□□□ -0.77
NEDD1-212ENST00000557478 TSPEAR-AS2P59090 65 aa10.24□□□□□ -0.77
NEDD1-212ENST00000557478 SPRR4Q96PI1 79 aa10.23□□□□□ -0.77
NEDD1-212ENST00000557478 TRBV10-3A0A0K0K1G6 114 aa10.22□□□□□ -0.77
NEDD1-212ENST00000557478 SYS1-DBNDD2H3BUS1 97 aa10.22□□□□□ -0.77
NEDD1-212ENST00000557478 HIST1H2BKO60814 126 aa10.22□□□□□ -0.77
NEDD1-212ENST00000557478 HIST1H2BJP06899 126 aa10.22□□□□□ -0.77
NEDD1-212ENST00000557478 HIST1H2BOP23527 126 aa10.22□□□□□ -0.77
NEDD1-212ENST00000557478 DDTP30046 118 aa10.22□□□□□ -0.77
NEDD1-212ENST00000557478 HIST1H2BBP33778 126 aa10.22□□□□□ -0.77
NEDD1-212ENST00000557478 HIST1H2BDP58876 126 aa10.22□□□□□ -0.77
NEDD1-212ENST00000557478 HIST1H2BCP62807 126 aa10.22□□□□□ -0.77
NEDD1-212ENST00000557478 HIST2H2BEQ16778 126 aa10.22□□□□□ -0.77
NEDD1-212ENST00000557478 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.22□□□□□ -0.77
NEDD1-212ENST00000557478 HIST1H2BHQ93079 126 aa10.22□□□□□ -0.77
NEDD1-212ENST00000557478 HIST1H2BNQ99877 126 aa10.22□□□□□ -0.77
NEDD1-212ENST00000557478 HIST1H2BMQ99879 126 aa10.22□□□□□ -0.77
NEDD1-212ENST00000557478 PMCHL2Q9BQD1 86 aa10.22□□□□□ -0.77
NEDD1-212ENST00000557478 S100A7L2Q5SY68 101 aa10.21□□□□□ -0.77
NEDD1-212ENST00000557478 KRTAP4-16G5E9R7 235 aaPredicted RBP10.2□□□□□ -0.78
NEDD1-212ENST00000557478 JOSD1Q15040 202 aaPredicted RBP10.2□□□□□ -0.78
NEDD1-212ENST00000557478 C4orf48Q5BLP8 95 aa10.2□□□□□ -0.78
NEDD1-212ENST00000557478 PET117Q6UWS5 81 aa10.2□□□□□ -0.78
NEDD1-212ENST00000557478 AKR1D1P51857 326 aa10.19□□□□□ -0.78
NEDD1-212ENST00000557478 DAND5Q8N907 189 aa10.18□□□□□ -0.78
NEDD1-212ENST00000557478 A0A0J9YXY3 114 aa10.17□□□□□ -0.78
NEDD1-212ENST00000557478 TIMM17BO60830 172 aa10.17□□□□□ -0.78
NEDD1-212ENST00000557478 HINT1P49773 126 aaPredicted RBP10.17□□□□□ -0.78
NEDD1-212ENST00000557478 LINC01545Q5VT33 79 aa10.17□□□□□ -0.78
NEDD1-212ENST00000557478 SMCR5Q8TEV8 140 aa10.17□□□□□ -0.78
NEDD1-212ENST00000557478 LPAP08519 4548 aa10.16□□□□□ -0.78
NEDD1-212ENST00000557478 B5MCH6 92 aa10.16□□□□□ -0.78
NEDD1-212ENST00000557478 IGLV6-57P01721 117 aa10.16□□□□□ -0.78
NEDD1-212ENST00000557478 C5orf52A6NGY3 159 aa10.15□□□□□ -0.78
NEDD1-212ENST00000557478 LINC00483Q53H64 154 aa10.15□□□□□ -0.78
NEDD1-212ENST00000557478 COA6Q5JTJ3 125 aaKnown RBP10.15□□□□□ -0.78
NEDD1-212ENST00000557478 Q6ZRX8 168 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms