RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 C6orf223Q8N319 242 aa6.33□□□□□ -1.4
SYNE3-205ENST00000557275 LY6G6DO95868 133 aa6.33□□□□□ -1.4
SYNE3-205ENST00000557275 Q6ZSV7 163 aa6.33□□□□□ -1.4
SYNE3-205ENST00000557275 STAB2Q8WWQ8 2551 aa6.33□□□□□ -1.4
SYNE3-205ENST00000557275 EDN2P20800 178 aa6.32□□□□□ -1.4
SYNE3-205ENST00000557275 LINC01600Q96MT4 127 aa6.32□□□□□ -1.4
SYNE3-205ENST00000557275 LY6G6CO95867 125 aa6.32□□□□□ -1.4
SYNE3-205ENST00000557275 CR1P17927 2039 aa6.31□□□□□ -1.4
SYNE3-205ENST00000557275 BRI3O95415 125 aa6.31□□□□□ -1.4
SYNE3-205ENST00000557275 LINC00313P59037 77 aa6.31□□□□□ -1.4
SYNE3-205ENST00000557275 IGLV1-40P01703 118 aa6.31□□□□□ -1.4
SYNE3-205ENST00000557275 C4orf26Q17RF5 130 aa6.3□□□□□ -1.4
SYNE3-205ENST00000557275 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
SYNE3-205ENST00000557275 CDIP1Q9H305 208 aa6.3□□□□□ -1.4
SYNE3-205ENST00000557275 IGLV2-18A0A075B6J9 118 aa6.29□□□□□ -1.4
SYNE3-205ENST00000557275 PRR15Q8IV56 129 aa6.29□□□□□ -1.4
SYNE3-205ENST00000557275 PROK1P58294 105 aa6.29□□□□□ -1.4
SYNE3-205ENST00000557275 KMT2BQ9UMN6 2715 aaPredicted RBP6.29□□□□□ -1.4
SYNE3-205ENST00000557275 CRIP2P52943 208 aaPredicted RBP6.28□□□□□ -1.4
SYNE3-205ENST00000557275 C9orf116Q5BN46 136 aaPredicted RBP6.28□□□□□ -1.4
SYNE3-205ENST00000557275 ZNF295-AS1Q8N0V1 137 aa6.28□□□□□ -1.4
SYNE3-205ENST00000557275 ADAMTSL4-AS1Q5T5F5 129 aa6.28□□□□□ -1.4
SYNE3-205ENST00000557275 LCA10Q71F78 164 aa6.28□□□□□ -1.4
SYNE3-205ENST00000557275 Q8NBF4 154 aa6.28□□□□□ -1.4
SYNE3-205ENST00000557275 INAFM1C9JVW0 142 aa6.28□□□□□ -1.4
SYNE3-205ENST00000557275 SETXQ7Z333 2677 aaKnown RBP6.27□□□□□ -1.41
SYNE3-205ENST00000557275 CDC42SE1Q9NRR8 79 aa6.27□□□□□ -1.41
SYNE3-205ENST00000557275 TRBV7-4A0A0J9YYF1 115 aa6.27□□□□□ -1.41
SYNE3-205ENST00000557275 IGLV4-60A0A075B6I1 120 aa6.27□□□□□ -1.41
SYNE3-205ENST00000557275 C1orf134Q5TEV5 83 aa6.27□□□□□ -1.41
SYNE3-205ENST00000557275 LINC01546A6NGU7 62 aa6.27□□□□□ -1.41
SYNE3-205ENST00000557275 MIR22HGQ0VDD5 57 aa6.27□□□□□ -1.41
SYNE3-205ENST00000557275 MDFIQ99750 246 aa6.27□□□□□ -1.41
SYNE3-205ENST00000557275 FLNAP21333 2647 aaKnown RBP6.26□□□□□ -1.41
SYNE3-205ENST00000557275 ITPR3Q14573 2671 aa6.26□□□□□ -1.41
SYNE3-205ENST00000557275 SPATA3Q8NHX4 192 aa6.26□□□□□ -1.41
SYNE3-205ENST00000557275 EPM2AB3EWF7 344 aa6.26□□□□□ -1.41
SYNE3-205ENST00000557275 IGLV5-39A0A0G2JS06 123 aa6.25□□□□□ -1.41
SYNE3-205ENST00000557275 M0R2N4 97 aa6.25□□□□□ -1.41
SYNE3-205ENST00000557275 TEX15Q9BXT5 2789 aa6.25□□□□□ -1.41
SYNE3-205ENST00000557275 COX6A2Q02221 97 aa6.25□□□□□ -1.41
SYNE3-205ENST00000557275 UNC79Q9P2D8 2635 aa6.25□□□□□ -1.41
SYNE3-205ENST00000557275 BRWD1-AS2P59051 145 aa6.24□□□□□ -1.41
SYNE3-205ENST00000557275 KLKP1Q107X0 134 aa6.24□□□□□ -1.41
SYNE3-205ENST00000557275 Q6ZQT0 140 aa6.24□□□□□ -1.41
SYNE3-205ENST00000557275 PRR9Q5T870 116 aa6.24□□□□□ -1.41
SYNE3-205ENST00000557275 Q6ZRX8 168 aa6.24□□□□□ -1.41
SYNE3-205ENST00000557275 A8MWP4 228 aa6.24□□□□□ -1.41
SYNE3-205ENST00000557275 IGLV1-51P01701 117 aa6.23□□□□□ -1.41
SYNE3-205ENST00000557275 FHL2Q14192 279 aa6.23□□□□□ -1.41
SYNE3-205ENST00000557275 LINC01006Q8NI28 216 aa6.23□□□□□ -1.41
SYNE3-205ENST00000557275 TSPEAR-AS2P59090 65 aa6.23□□□□□ -1.41
SYNE3-205ENST00000557275 KIF25-AS1Q9Y6Z4 181 aa6.23□□□□□ -1.41
SYNE3-205ENST00000557275 PRR3P79522 188 aaKnown RBP6.22□□□□□ -1.41
SYNE3-205ENST00000557275 C11orf21Q9P2W6 132 aa6.22□□□□□ -1.41
SYNE3-205ENST00000557275 H3BNG1 76 aa6.22□□□□□ -1.41
SYNE3-205ENST00000557275 COA5Q86WW8 74 aa6.22□□□□□ -1.41
SYNE3-205ENST00000557275 DEFB116Q30KQ4 102 aa6.21□□□□□ -1.41
SYNE3-205ENST00000557275 LINC00483Q53H64 154 aa6.21□□□□□ -1.41
SYNE3-205ENST00000557275 KIAA0087Q14695 138 aa6.21□□□□□ -1.41
SYNE3-205ENST00000557275 Q9UF83 564 aa6.21□□□□□ -1.42
SYNE3-205ENST00000557275 CHD6Q8TD26 2715 aa6.21□□□□□ -1.42
SYNE3-205ENST00000557275 MUC22E2RYF6 1773 aaPredicted RBP6.21□□□□□ -1.42
SYNE3-205ENST00000557275 SMCR5Q8TEV8 140 aa6.21□□□□□ -1.42
SYNE3-205ENST00000557275 C1orf229Q6ZS94 237 aaPredicted RBP6.21□□□□□ -1.42
SYNE3-205ENST00000557275 SPACA4Q8TDM5 124 aa6.2□□□□□ -1.42
SYNE3-205ENST00000557275 C22orf24Q9Y442 160 aa6.2□□□□□ -1.42
SYNE3-205ENST00000557275 A0A0A0MQY5 61 aa6.19□□□□□ -1.42
SYNE3-205ENST00000557275 IGLV5-45A0A087WSX0 123 aa6.19□□□□□ -1.42
SYNE3-205ENST00000557275 SPANXA2-OT1Q8N9U9 137 aa6.19□□□□□ -1.42
SYNE3-205ENST00000557275 Q8NA96 180 aa6.19□□□□□ -1.42
SYNE3-205ENST00000557275 RPL37AP61513 92 aaKnown RBP6.19□□□□□ -1.42
SYNE3-205ENST00000557275 LYPD5Q6UWN5 251 aa6.19□□□□□ -1.42
SYNE3-205ENST00000557275 IGLV8-61A0A075B6I0 122 aa6.18□□□□□ -1.42
SYNE3-205ENST00000557275 Q6ZRP5 223 aa6.18□□□□□ -1.42
SYNE3-205ENST00000557275 LINC00310P59036 64 aa6.18□□□□□ -1.42
SYNE3-205ENST00000557275 UTP20O75691 2785 aaKnown RBP6.18□□□□□ -1.42
SYNE3-205ENST00000557275 TM2D3Q9BRN9 247 aa6.17□□□□□ -1.42
SYNE3-205ENST00000557275 CEP350Q5VT06 3117 aa6.17□□□□□ -1.42
SYNE3-205ENST00000557275 ODF3L2Q3SX64 289 aa6.17□□□□□ -1.42
SYNE3-205ENST00000557275 IGHV3OR16-9A0A0B4J2B5 98 aa6.17□□□□□ -1.42
SYNE3-205ENST00000557275 CSNK1G2-AS1Q8NCQ2 148 aa6.17□□□□□ -1.42
SYNE3-205ENST00000557275 LINC00476Q8WZB0 136 aa6.17□□□□□ -1.42
SYNE3-205ENST00000557275 C16orf90A8MZG2 172 aa6.16□□□□□ -1.42
SYNE3-205ENST00000557275 Q6ZRU5 148 aa6.16□□□□□ -1.42
SYNE3-205ENST00000557275 APLNQ9ULZ1 77 aa6.15□□□□□ -1.42
SYNE3-205ENST00000557275 DNAH12Q6ZR08 3092 aa6.15□□□□□ -1.42
SYNE3-205ENST00000557275 GCN1Q92616 2671 aaKnown RBP6.15□□□□□ -1.43
SYNE3-205ENST00000557275 MRPL34Q9BQ48 92 aaKnown RBP6.15□□□□□ -1.43
SYNE3-205ENST00000557275 COL6A5A8TX70 2615 aa6.15□□□□□ -1.43
SYNE3-205ENST00000557275 TYMSOSQ8TAI1 123 aa6.14□□□□□ -1.43
SYNE3-205ENST00000557275 C16orf95Q9H693 158 aa6.14□□□□□ -1.43
SYNE3-205ENST00000557275 PRO3102Q9H379 93 aa6.14□□□□□ -1.43
SYNE3-205ENST00000557275 GAS8-AS1O95177 125 aa6.13□□□□□ -1.43
SYNE3-205ENST00000557275 Q6ZPA2 131 aa6.13□□□□□ -1.43
SYNE3-205ENST00000557275 A8MTW9 85 aa6.13□□□□□ -1.43
SYNE3-205ENST00000557275 URB1-AS1Q96HZ7 61 aa6.13□□□□□ -1.43
SYNE3-205ENST00000557275 C19orf84I3L1E1 186 aa6.13□□□□□ -1.43
SYNE3-205ENST00000557275 Q1T7F1 81 aa6.13□□□□□ -1.43
SYNE3-205ENST00000557275 GVQW2A0A096LPI5 108 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms