RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 TRGC2P03986 189 aa13.38□□□□□ -0.27
TMEM260-214ENST00000556975 LINC00158P58513 81 aa13.38□□□□□ -0.27
TMEM260-214ENST00000556975 TMEM126AQ9H061 195 aa13.38□□□□□ -0.27
TMEM260-214ENST00000556975 M0R378 163 aa13.35□□□□□ -0.27
TMEM260-214ENST00000556975 TYMSOSQ8TAI1 123 aa13.35□□□□□ -0.27
TMEM260-214ENST00000556975 TMEM238C9JI98 176 aa13.34□□□□□ -0.27
TMEM260-214ENST00000556975 FAM229BQ4G0N7 80 aa13.34□□□□□ -0.27
TMEM260-214ENST00000556975 HERV-K104P63124 156 aa13.33□□□□□ -0.28
TMEM260-214ENST00000556975 FAM19A1Q7Z5A9 133 aa13.33□□□□□ -0.28
TMEM260-214ENST00000556975 ANAPC11Q9NYG5 84 aa13.33□□□□□ -0.28
TMEM260-214ENST00000556975 A0A0U1RRA0 63 aa13.32□□□□□ -0.28
TMEM260-214ENST00000556975 LEPROTL1O95214 131 aa13.32□□□□□ -0.28
TMEM260-214ENST00000556975 LINC00310P59036 64 aa13.32□□□□□ -0.28
TMEM260-214ENST00000556975 PRLHP81277 87 aa13.32□□□□□ -0.28
TMEM260-214ENST00000556975 SERF1AO75920 110 aa13.31□□□□□ -0.28
TMEM260-214ENST00000556975 SMIM13P0DJ93 91 aa13.31□□□□□ -0.28
TMEM260-214ENST00000556975 KRTAP13-2Q52LG2 175 aa13.31□□□□□ -0.28
TMEM260-214ENST00000556975 LINC00587B1AMM8 73 aa13.3□□□□□ -0.28
TMEM260-214ENST00000556975 ATP6V1G1O75348 118 aa13.29□□□□□ -0.28
TMEM260-214ENST00000556975 PRR4Q16378 134 aa13.29□□□□□ -0.28
TMEM260-214ENST00000556975 MEIG1Q5JSS6 88 aa13.29□□□□□ -0.28
TMEM260-214ENST00000556975 SLC7A5P1Q8MH63 180 aa13.29□□□□□ -0.28
TMEM260-214ENST00000556975 NDUFA12Q9UI09 145 aa13.29□□□□□ -0.28
TMEM260-214ENST00000556975 TSPAN13O95857 204 aa13.28□□□□□ -0.28
TMEM260-214ENST00000556975 MYMXA0A1B0GTQ4 84 aa13.27□□□□□ -0.29
TMEM260-214ENST00000556975 COLCA2A8K830 154 aa13.27□□□□□ -0.29
TMEM260-214ENST00000556975 H0Y8G0 127 aa13.27□□□□□ -0.29
TMEM260-214ENST00000556975 MIR7-3HGQ8N6C7 128 aa13.27□□□□□ -0.29
TMEM260-214ENST00000556975 PLEKHB2Q96CS7 222 aa13.27□□□□□ -0.29
TMEM260-214ENST00000556975 PLNP26678 52 aa13.25□□□□□ -0.29
TMEM260-214ENST00000556975 BOD1L2Q8IYS8 172 aa13.25□□□□□ -0.29
TMEM260-214ENST00000556975 HSPB8Q9UJY1 196 aa13.25□□□□□ -0.29
TMEM260-214ENST00000556975 IGKV2D-26A0A0A0MRZ7 120 aa13.24□□□□□ -0.29
TMEM260-214ENST00000556975 LEPROTO15243 131 aa13.24□□□□□ -0.29
TMEM260-214ENST00000556975 MAP1LC3CQ9BXW4 147 aa13.23□□□□□ -0.29
TMEM260-214ENST00000556975 TSPEAR-AS2P59090 65 aa13.22□□□□□ -0.29
TMEM260-214ENST00000556975 PRYO14603 147 aa13.21□□□□□ -0.29
TMEM260-214ENST00000556975 FABP4P15090 132 aa13.21□□□□□ -0.29
TMEM260-214ENST00000556975 KCNQ1DNQ9H478 68 aa13.21□□□□□ -0.29
TMEM260-214ENST00000556975 LOC107984156A0A0G2JMH3 177 aa13.2□□□□□ -0.3
TMEM260-214ENST00000556975 DPM2O94777 84 aa13.2□□□□□ -0.3
TMEM260-214ENST00000556975 SPRR1AP35321 89 aa13.2□□□□□ -0.3
TMEM260-214ENST00000556975 ARL17AQ8IVW1 177 aa13.2□□□□□ -0.3
TMEM260-214ENST00000556975 HIGD2AQ9BW72 106 aa13.2□□□□□ -0.3
TMEM260-214ENST00000556975 CTAG1AP78358 180 aa13.19□□□□□ -0.3
TMEM260-214ENST00000556975 LINC00337Q8N6G1 96 aa13.19□□□□□ -0.3
TMEM260-214ENST00000556975 LINC00304Q8N9R0 145 aa13.19□□□□□ -0.3
TMEM260-214ENST00000556975 J3QQQ9 107 aa13.18□□□□□ -0.3
TMEM260-214ENST00000556975 NCR3O14931 201 aa13.18□□□□□ -0.3
TMEM260-214ENST00000556975 IGKCP01834 107 aa13.17□□□□□ -0.3
TMEM260-214ENST00000556975 HERVK_113P61574 105 aa13.17□□□□□ -0.3
TMEM260-214ENST00000556975 KRTAP4-16G5E9R7 235 aaPredicted RBP13.16□□□□□ -0.3
TMEM260-214ENST00000556975 NMUP48645 174 aa13.16□□□□□ -0.3
TMEM260-214ENST00000556975 PMCHL2Q9BQD1 86 aa13.16□□□□□ -0.3
TMEM260-214ENST00000556975 SPRR4Q96PI1 79 aa13.15□□□□□ -0.3
TMEM260-214ENST00000556975 TRBV10-3A0A0K0K1G6 114 aa13.14□□□□□ -0.31
TMEM260-214ENST00000556975 DAND5Q8N907 189 aa13.13□□□□□ -0.31
TMEM260-214ENST00000556975 ZNF706Q9Y5V0 76 aaPredicted RBP13.13□□□□□ -0.31
TMEM260-214ENST00000556975 TRBV10-2A0A0K0K1G8 114 aa13.12□□□□□ -0.31
TMEM260-214ENST00000556975 LGALS3P17931 250 aaKnown RBP13.12□□□□□ -0.31
TMEM260-214ENST00000556975 C3orf22Q8N5N4 141 aa13.12□□□□□ -0.31
TMEM260-214ENST00000556975 ETDCA0A1B0GVM5 59 aa13.1□□□□□ -0.31
TMEM260-214ENST00000556975 S100A12P80511 92 aa13.1□□□□□ -0.31
TMEM260-214ENST00000556975 SMCR5Q8TEV8 140 aa13.1□□□□□ -0.31
TMEM260-214ENST00000556975 MUC2Q02817 5179 aa13.09□□□□□ -0.31
TMEM260-214ENST00000556975 E9PLD3 99 aa13.07□□□□□ -0.32
TMEM260-214ENST00000556975 HIST1H2BKO60814 126 aa13.07□□□□□ -0.32
TMEM260-214ENST00000556975 NDUFC2O95298 119 aa13.07□□□□□ -0.32
TMEM260-214ENST00000556975 HIST1H2BJP06899 126 aa13.07□□□□□ -0.32
TMEM260-214ENST00000556975 HIST1H2BOP23527 126 aa13.07□□□□□ -0.32
TMEM260-214ENST00000556975 DDTP30046 118 aa13.07□□□□□ -0.32
TMEM260-214ENST00000556975 HIST1H2BBP33778 126 aa13.07□□□□□ -0.32
TMEM260-214ENST00000556975 HIST1H2BDP58876 126 aa13.07□□□□□ -0.32
TMEM260-214ENST00000556975 HIST1H2BCP62807 126 aa13.07□□□□□ -0.32
TMEM260-214ENST00000556975 HIST2H2BEQ16778 126 aa13.07□□□□□ -0.32
TMEM260-214ENST00000556975 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.07□□□□□ -0.32
TMEM260-214ENST00000556975 HIST1H2BHQ93079 126 aa13.07□□□□□ -0.32
TMEM260-214ENST00000556975 HIST1H2BNQ99877 126 aa13.07□□□□□ -0.32
TMEM260-214ENST00000556975 HIST1H2BMQ99879 126 aa13.07□□□□□ -0.32
TMEM260-214ENST00000556975 MIEN1Q9BRT3 115 aa13.07□□□□□ -0.32
TMEM260-214ENST00000556975 SPAG11AQ6PDA7 123 aa13.06□□□□□ -0.32
TMEM260-214ENST00000556975 SPANXB1Q9NS25 103 aaPredicted RBP13.06□□□□□ -0.32
TMEM260-214ENST00000556975 B5MCH6 92 aa13.05□□□□□ -0.32
TMEM260-214ENST00000556975 SYS1-DBNDD2H3BUS1 97 aa13.05□□□□□ -0.32
TMEM260-214ENST00000556975 RETNLBQ9BQ08 111 aa13.05□□□□□ -0.32
TMEM260-214ENST00000556975 A0A0J9YXY3 114 aa13.04□□□□□ -0.32
TMEM260-214ENST00000556975 IGLV6-57P01721 117 aa13.02□□□□□ -0.33
TMEM260-214ENST00000556975 LINC00483Q53H64 154 aa13.02□□□□□ -0.33
TMEM260-214ENST00000556975 ADAMTSL4-AS1Q5T5F5 129 aa13.02□□□□□ -0.33
TMEM260-214ENST00000556975 SOSTDC1Q6X4U4 206 aa13.01□□□□□ -0.33
TMEM260-214ENST00000556975 LINC01545Q5VT33 79 aa13□□□□□ -0.33
TMEM260-214ENST00000556975 EIF4EBP3O60516 100 aaPredicted RBP12.99□□□□□ -0.33
TMEM260-214ENST00000556975 S100A7L2Q5SY68 101 aa12.99□□□□□ -0.33
TMEM260-214ENST00000556975 PPDPFQ9H3Y8 114 aa12.99□□□□□ -0.33
TMEM260-214ENST00000556975 ERC2-IT1O76042 136 aa12.98□□□□□ -0.33
TMEM260-214ENST00000556975 TPRXLQ17RH7 258 aa12.98□□□□□ -0.33
TMEM260-214ENST00000556975 PET117Q6UWS5 81 aa12.98□□□□□ -0.33
TMEM260-214ENST00000556975 Q6ZRX8 168 aa12.98□□□□□ -0.33
TMEM260-214ENST00000556975 Q9BRP9 147 aa12.98□□□□□ -0.33
TMEM260-214ENST00000556975 IGLV7-46A0A075B6I9 117 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms